LOCUS       NM_001014223            1513 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus deoxyribonuclease 1-like 1 (Dnase1l1), mRNA.
ACCESSION   NM_001014223 XM_343846
VERSION     NM_001014223.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1513)
  AUTHORS   Shiokawa,D., Shika,Y., Saito,K., Yamazaki,K. and Tanuma,S.
  TITLE     Physical and biochemical properties of mammalian DNase X proteins:
            non-AUG translation initiation of porcine and bovine mRNAs for
            DNase X
  JOURNAL   Biochem J 392 (Pt 3), 511-517 (2005)
   PUBMED   16107205
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001014223.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DQ116785.1, SRR26643429.60260.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-115               JAXUCZ010000021.1  157216597-157216711 c
            116-419             JAXUCZ010000021.1  157211427-157211730 c
            420-508             JAXUCZ010000021.1  157211029-157211117 c
            509-586             JAXUCZ010000021.1  157210862-157210939 c
            587-687             JAXUCZ010000021.1  157209368-157209468 c
            688-800             JAXUCZ010000021.1  157209107-157209219 c
            801-1049            JAXUCZ010000021.1  157208779-157209027 c
            1050-1513           JAXUCZ010000021.1  157208230-157208693 c
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq37"
     gene            1..1513
                     /gene="Dnase1l1"
                     /note="deoxyribonuclease 1-like 1"
                     /db_xref="GeneID:363522"
                     /db_xref="RGD:1359588"
     exon            1..115
                     /gene="Dnase1l1"
                     /inference="alignment:Splign:2.1.0"
     exon            116..419
                     /gene="Dnase1l1"
                     /inference="alignment:Splign:2.1.0"
     CDS             228..1166
                     /gene="Dnase1l1"
                     /EC_number="3.1.21.-"
                     /note="DNase X; DNase I-like 1; deoxyribonuclease I-like
                     1"
                     /codon_start=1
                     /product="deoxyribonuclease-1-like 1 precursor"
                     /protein_id="NP_001014245.2"
                     /db_xref="GeneID:363522"
                     /db_xref="RGD:1359588"
                     /translation="MPSGQPVFPRRVPDAYIAMRGLVVASLLILLVGGTDAFRICAFN
                     AHRLTLTKVIKESVMDTLVQILARCDIMVLQEVVDSSQNTVLFLLQKLQSSKSYSFLN
                     SSLLGRSTYKEKYVYIYRSDKTQVLNFYQYNDTEDIFAREPFVAQFTLPSKILPSVVL
                     VPLHTTPKDVEKELNALYDVFLDVSQRWQNENVILLGDFNADCASLAKKRLNSLLLRT
                     KAGFHWVIPDGEDTTVRASTNCTYDRIVMHGQGCQKLLKAAATFDFPRRFQLTEEEAL
                     RVSDHYPVEVELNKAAQGIPPHCLSTLLLLSLSQLG"
     exon            420..508
                     /gene="Dnase1l1"
                     /inference="alignment:Splign:2.1.0"
     exon            509..586
                     /gene="Dnase1l1"
                     /inference="alignment:Splign:2.1.0"
     exon            587..687
                     /gene="Dnase1l1"
                     /inference="alignment:Splign:2.1.0"
     exon            688..800
                     /gene="Dnase1l1"
                     /inference="alignment:Splign:2.1.0"
     exon            801..1049
                     /gene="Dnase1l1"
                     /inference="alignment:Splign:2.1.0"
     exon            1050..1513
                     /gene="Dnase1l1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cccacccctc cggacccaac tgcacgtcct catccttccc tggctggcga ggcgattctg
       61 tggagtagag ttttattggc tgaggcaagc gtcggggccg acctggtctg tggaggtggt
      121 caagctctgt gtgcagaagt tgaaatacat cccaggaaga gattcaagaa atgttcagtg
      181 ccaacagcag ggagaacacc aattagctga gatcagctgc agtgccaatg ccctctggac
      241 agcctgtatt ccctaggagg gttcctgatg catacatagc aatgcgtggc cttgtcgtgg
      301 cttcactgct cattctcctg gttggtggga ctgatgcctt tcgtatctgt gccttcaatg
      361 cccacagact gacactgacc aaggtaatca aggaatcagt gatggatacc ttagttcaga
      421 tcctagcccg atgtgatatc atggtgcttc aggaggtagt agattcttcc cagaatactg
      481 tcctctttct acttcaaaaa cttcaaagtt ccaagagtta tagcttccta aacagctcat
      541 tgctgggccg cagcacatac aaggaaaagt atgtgtatat ctacaggtct gacaagacac
      601 aggtcctaaa tttctaccag tataatgaca cagaagacat ttttgcccga gaaccatttg
      661 tggcccagtt caccctccct agcaaaatcc ttccaagtgt ggtgcttgtt cctctccaca
      721 ccactcccaa agatgtagag aaggagctca atgccctata tgatgtgttt ctggatgtct
      781 cccagcgctg gcagaatgag aatgtgattc tgcttggaga cttcaatgca gactgtgcat
      841 cactggcaaa gaaacgtctg aacagcctgc tactcaggac taaggcaggc ttccactggg
      901 tgattcctga tggggaggac actacagtgc gggccagcac taactgtacc tatgaccgaa
      961 ttgtgatgca tgggcagggt tgccagaagc tgctgaaggc tgcagctacc tttgacttcc
     1021 ccaggaggtt tcagctgact gaggaagagg ctcttcgcgt cagtgaccat tatcctgtgg
     1081 aagtggaact gaacaaggca gctcagggta tcccacccca ctgtttgtcc actctactgc
     1141 tgctgtcact atctcagctg ggctagatag ccattgactt gattgaccac cactggtagt
     1201 ctcctgaagc aagacctgaa agtcaactac agctttttta atgtagtttc tgctgcttgc
     1261 tatcctaggt aagccagtgc tggtagtata agtctgctct cttgcctgat aatccagtga
     1321 caaaggaggc tacagtagga atgggctcag atgatactta agagatttct gcaactcaca
     1381 ctgagtccac actgaaaaaa aaaaaaaact aggaaaaaca tcccctaggc ttgcttcaaa
     1441 attcttatgt ccacatcttc atgcactggt attacattta aaatgttcaa taaaaccacc
     1501 aattttaacc ttt
//
