LOCUS       NM_001108865            1613 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus DnaJ heat shock protein family (Hsp40) member C9
            (Dnajc9), mRNA.
ACCESSION   NM_001108865 XM_001064040 XM_344286
VERSION     NM_001108865.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1613)
  AUTHORS   Liu CM, Fann CS, Chen CY, Liu YL, Oyang YJ, Yang WC, Chang CC, Wen
            CC, Chen WJ, Hwang TJ, Hsieh MH, Liu CC, Faraone SV, Tsuang MT and
            Hwu HG.
  TITLE     ANXA7, PPP3CB, DNAJC9, and ZMYND17 genes at chromosome 10q22
            associated with the subgroup of schizophrenia with deficits in
            attention and executive function
  JOURNAL   Biol Psychiatry 70 (1), 51-58 (2011)
   PUBMED   21531385
REFERENCE   2  (bases 1 to 1613)
  AUTHORS   de Mateo S, Castillo J, Estanyol JM, Ballesca JL and Oliva R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   3  (bases 1 to 1613)
  AUTHORS   Han C, Chen T, Li N, Yang M, Wan T and Cao X.
  TITLE     HDJC9, a novel human type C DnaJ/HSP40 member interacts with and
            cochaperones HSP70 through the J domain
  JOURNAL   Biochem Biophys Res Commun 353 (2), 280-285 (2007)
   PUBMED   17182002
REFERENCE   4  (bases 1 to 1613)
  AUTHORS   Takamura Y, Yagi H, Hase K, Yoneda T, Maeda M, Akagi Y and Sato M.
  TITLE     JDD1, a novel member of the DnaJ family, is expressed in the
            germinal zone of the rat brain
  JOURNAL   Biochem Biophys Res Commun 285 (2), 387-392 (2001)
   PUBMED   11444854
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474061.1.
            
            [WARNING] On Apr 1, 2024 this sequence was replaced by
            NM_001108865.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_344286.3, XM_001064040.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB002591.1, FQ215794.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p16"
     gene            1..1613
                     /gene="Dnajc9"
                     /gene_synonym="JDD1"
                     /note="DnaJ heat shock protein family (Hsp40) member C9"
                     /db_xref="GeneID:364240"
                     /db_xref="RGD:1305009"
     exon            1..275
                     /gene="Dnajc9"
                     /gene_synonym="JDD1"
                     /inference="alignment:Splign:2.1.0"
     CDS             96..875
                     /gene="Dnajc9"
                     /gene_synonym="JDD1"
                     /note="DnaJ-like factor; DnaJ (Hsp40) homolog, subfamily
                     C, member 9"
                     /codon_start=1
                     /product="dnaJ homolog subfamily C member 9"
                     /protein_id="NP_001102335.1"
                     /db_xref="GeneID:364240"
                     /db_xref="RGD:1305009"
                     /translation="MGLLELCEQVFGTADLYQVLGVRREASDGEVRRGYHKVSLQVHP
                     DRVKEDQKEDATRRFQILGRVYAVLSDKEQKAVYDEQGTVDEDSAGLHQDRDWDAYWR
                     LLFKKISLEDIQAFEKTYKGSEEELNDIKQAYLDFKGDMDQIMESVLCVQYTDEPRIR
                     NIIQKAIDAKEVPSYNAFVKESKQKMNARKRRAQEEAKEAELSRKELGLEGGVDSLKA
                     LIQSRQKDRQKEMDSFLAQMEAKYCKPSKGGKRAALRKEKK"
     exon            276..416
                     /gene="Dnajc9"
                     /gene_synonym="JDD1"
                     /inference="alignment:Splign:2.1.0"
     exon            417..671
                     /gene="Dnajc9"
                     /gene_synonym="JDD1"
                     /inference="alignment:Splign:2.1.0"
     exon            672..758
                     /gene="Dnajc9"
                     /gene_synonym="JDD1"
                     /inference="alignment:Splign:2.1.0"
     exon            759..1613
                     /gene="Dnajc9"
                     /gene_synonym="JDD1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcgcccagag ctatttgggc gggaaaaggc ggcgggccgg cggagaggct gtgggtaaag
       61 cttcgcgggg tttgcggagc agcctcttcc ccgggatggg gctgctggag ctgtgcgagc
      121 aggtgtttgg caccgccgac ctctaccagg tgctgggcgt gcggcgcgag gcttccgacg
      181 gcgaagtccg acgcggctac cacaaggtgt ccctgcaagt gcaccccgac agagtaaagg
      241 aggaccagaa agaggacgcc acccgccgct tccagatctt ggggagagtg tacgcggttc
      301 tgagtgacaa ggagcagaaa gcagtgtacg atgaacaggg gacagtggac gaagactctg
      361 ctggcctcca ccaagaccga gactgggatg cgtattggag attactcttt aaaaagatat
      421 cgctagaaga tatccaagct tttgaaaaga catacaaagg ctccgaagaa gagctaaacg
      481 atattaagca agcctatctg gacttcaagg gcgacatgga tcagatcatg gagtctgtgc
      541 tttgtgtaca atacacagat gaacccagga taagaaacat cattcaaaaa gctattgatg
      601 ccaaagaggt tccgtcctac aatgccttcg ttaaagagtc taaacagaag atgaacgcaa
      661 ggaaaagaag ggctcaggaa gaagccaaag aagcagagct gagcaggaag gagctggggc
      721 tggaaggagg agtggatagc ctgaaagcgc tcatccagag cagacagaag gatcggcaaa
      781 aggaaatgga cagttttctg gctcagatgg aggcaaaata ctgcaaacct tccaaaggag
      841 ggaagagagc agcactcagg aaggagaaga agtaatggag tttcctcttc acgggcccta
      901 tgtcagtgta cggtgtacac aaggtaaagg cagccactaa tgtaaccttt gagagaagtt
      961 gtttgtcctg cctaagccaa gcaggattca tcaatctggt cttagtagtt tctagaagtc
     1021 acctaacact gtgtgagggc ttcgtgtgaa gggttgtggt gtgatggttg ggagggtggg
     1081 tttgacattt gcttccgtgg accttgtgcc caaagagctc tatctagaat acaggtttct
     1141 gtggactgtt cttactgatg tgcgtgtaat gaagagattc ctatggagaa caccctcaga
     1201 acacttgctg aacaactgtc ctctaaataa atgccagtgt gctctggtct taatcctaca
     1261 cagatcttct tttctggttc tactgttagg gtttgtcttc tgtccttgca gtagcagaca
     1321 tgtgtattca tattcttgct aacttttttt gtaagattgt atatggctaa ataaagaaac
     1381 aatgacaaag gtctggtgga ttatttaaat gaccccattg gtctataaca aagtgtttaa
     1441 aggacttaag taatctagtt agcatcgcac agacaagctg gctttggcac agatagatgt
     1501 cacagtcctg tctttgcagg acacagggtt aggcatttca ttggccttgt ctgaactttt
     1561 catctgcaag agggcgatcc aaactcatta aattgcatgt actaagtcta gtg
//
