LOCUS       NM_001013168            1416 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus DnaJ heat shock protein family (Hsp40) member C8
            (Dnajc8), mRNA.
ACCESSION   NM_001013168 XM_232744
VERSION     NM_001013168.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1416)
  AUTHORS   Ito,N., Kamiguchi,K., Nakanishi,K., Sokolovskya,A., Hirohashi,Y.,
            Tamura,Y., Murai,A., Yamamoto,E., Kanaseki,T., Tsukahara,T.,
            Kochin,V., Chiba,S., Shimohama,S., Sato,N. and Torigoe,T.
  TITLE     A novel nuclear DnaJ protein, DNAJC8, can suppress the formation of
            spinocerebellar ataxia 3 polyglutamine aggregation in a J-domain
            independent manner
  JOURNAL   Biochem Biophys Res Commun 474 (4), 626-633 (2016)
   PUBMED   27133716
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC081863.1.
            
            On Apr 20, 2005 this sequence version replaced XM_232744.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC081863.1, FQ231836.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..1416
                     /gene="Dnajc8"
                     /note="DnaJ heat shock protein family (Hsp40) member C8"
                     /db_xref="GeneID:313035"
                     /db_xref="RGD:1306024"
     exon            1..97
                     /gene="Dnajc8"
                     /inference="alignment:Splign:2.1.0"
     CDS             20..781
                     /gene="Dnajc8"
                     /note="DnaJ (Hsp40) homolog, subfamily C, member 8"
                     /codon_start=1
                     /product="dnaJ homolog subfamily C member 8"
                     /protein_id="NP_001013186.1"
                     /db_xref="GeneID:313035"
                     /db_xref="RGD:1306024"
                     /translation="MAASGESGASGGGGSTEEAFMTFYSEVKQIEKRDSVLTSKNQIE
                     RLTRPGSSYFNLNPFEVLQIDPEVTDEEIKKRFRQLSILVHPDKNQDDADRAQKAFEA
                     VDKAYKLLLDQEQKKRALDVIQAGKEYVEHTVKERKKQLKKEGKPTNVEEDDPELFKQ
                     AVYKQTMKLFAELEIKRKEREAKEMHERKRQREEEIEAQEKAKREREWQKNFEESRDG
                     RVDSWRNFQANTKGKKEKKNRTFLRPPKVKMEQRE"
     exon            98..199
                     /gene="Dnajc8"
                     /inference="alignment:Splign:2.1.0"
     exon            200..256
                     /gene="Dnajc8"
                     /inference="alignment:Splign:2.1.0"
     exon            257..323
                     /gene="Dnajc8"
                     /inference="alignment:Splign:2.1.0"
     exon            324..418
                     /gene="Dnajc8"
                     /inference="alignment:Splign:2.1.0"
     exon            419..490
                     /gene="Dnajc8"
                     /inference="alignment:Splign:2.1.0"
     exon            491..582
                     /gene="Dnajc8"
                     /inference="alignment:Splign:2.1.0"
     exon            583..658
                     /gene="Dnajc8"
                     /inference="alignment:Splign:2.1.0"
     exon            659..1394
                     /gene="Dnajc8"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtggcggcta gccgggaaaa tggcggcttc gggagagagt ggtgcttctg gcggcggagg
       61 tagcacagag gaggcattta tgaccttcta cagtgaggtg aagcaaatag agaagagaga
      121 ttcagttcta acgtccaaaa atcagattga aagattgact cgtcctggtt cctcttactt
      181 taatctgaac ccatttgagg ttcttcaaat agatcctgaa gtgacagatg aagaaataaa
      241 aaagaggttc cgccagttgt ctatcttggt gcatcctgac aaaaaccagg acgatgctga
      301 cagagcacag aaggcttttg aagctgtgga caaagcttac aagttgctac tggatcagga
      361 gcaaaagaag agggccctgg atgtaattca ggcaggaaaa gaatacgtgg aacacactgt
      421 gaaagagcga aaaaagcaac taaagaagga agggaagcct acgaatgtag aggaagatga
      481 tcccgagctg ttcaaacagg cagtctacaa acagaccatg aagctgtttg ctgagctgga
      541 gattaaaagg aaagagagag aagccaaaga aatgcatgag aggaagcgac agagagaaga
      601 ggagatcgaa gcccaggaaa aagccaagcg agaaagagaa tggcagaaaa actttgagga
      661 aagtcgggat ggtcgagtgg acagttggcg aaatttccag gcaaatacaa agggcaagaa
      721 ggagaagaag aatcggacct tcctgcggcc accgaaagtc aagatggagc agcgggagtg
      781 agcgcagacc atggcggagc ctccctggcc agagtctccc cactgcctcc tcctgcttca
      841 aggactcact ttctccgcct cccccaacat agagtagcca ttgcttttta gtctattttg
      901 ttttcaatac aatttaatat caatcagagt aattctttgt acattgaggg gaggggcttg
      961 gtctaacctc ccatcctcac ccacggaacc accaggattg gaaggagctc ctgactcctg
     1021 ccgccgcctt ttcccacagc ctgtaactta atgttttata tttgaattgt ggtggcttga
     1081 aggtcatgta tagcttgtgg aaatcttcca attaaatgtc ttgctttcag tggtatcacc
     1141 ccgacttcag ataaccctgg gccaccttgg gaagccatcc ttgaggccct cgctccaata
     1201 ggaaaggcat ggtggactca cacagcagtc acttgtcctg acaccctgtg gtgtttggca
     1261 cgaggctccc agccacttaa acctgttcac tttccaaaga gtttgccatc ttccagcctg
     1321 tcccgttgtg tcctcgcttg tctgcattca ttagcggtaa tattctttta cgtataataa
     1381 atttttatac ccaaaaaaaa aaaaaaaaaa aaaaaa
//
