LOCUS       NM_213625               1771 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus DnaJ heat shock protein family (Hsp40) member C7
            (Dnajc7), mRNA.
ACCESSION   NM_213625 XM_220976
VERSION     NM_213625.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1771)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   2  (bases 1 to 1771)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
REFERENCE   3  (bases 1 to 1771)
  AUTHORS   Moffatt,N.S., Bruinsma,E., Uhl,C., Obermann,W.M. and Toft,D.
  TITLE     Role of the cochaperone Tpr2 in Hsp90 chaperoning
  JOURNAL   Biochemistry 47 (31), 8203-8213 (2008)
   PUBMED   18620420
REFERENCE   4  (bases 1 to 1771)
  AUTHORS   Brychzy,A., Rein,T., Winklhofer,K.F., Hartl,F.U., Young,J.C. and
            Obermann,W.M.
  TITLE     Cofactor Tpr2 combines two TPR domains and a J domain to regulate
            the Hsp70/Hsp90 chaperone system
  JOURNAL   EMBO J 22 (14), 3613-3623 (2003)
   PUBMED   12853476
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Oct 29, 2022 this sequence version replaced NM_213625.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643286.31968.1, FQ212948.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-92                JAXUCZ010000010.1  86054749-86054840   c
            93-181              JAXUCZ010000010.1  86038340-86038428   c
            182-306             JAXUCZ010000010.1  86035083-86035207   c
            307-420             JAXUCZ010000010.1  86034628-86034741   c
            421-495             JAXUCZ010000010.1  86031622-86031696   c
            496-614             JAXUCZ010000010.1  86027920-86028038   c
            615-768             JAXUCZ010000010.1  86027115-86027268   c
            769-933             JAXUCZ010000010.1  86026579-86026743   c
            934-1025            JAXUCZ010000010.1  86025765-86025856   c
            1026-1099           JAXUCZ010000010.1  86021206-86021279   c
            1100-1246           JAXUCZ010000010.1  86020643-86020789   c
            1247-1399           JAXUCZ010000010.1  86020299-86020451   c
            1400-1462           JAXUCZ010000010.1  86019671-86019733   c
            1463-1771           JAXUCZ010000010.1  86018977-86019285   c
FEATURES             Location/Qualifiers
     source          1..1771
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q31"
     gene            1..1771
                     /gene="Dnajc7"
                     /gene_synonym="CCRP"
                     /note="DnaJ heat shock protein family (Hsp40) member C7"
                     /db_xref="GeneID:303536"
                     /db_xref="RGD:1303226"
     exon            1..92
                     /gene="Dnajc7"
                     /gene_synonym="CCRP"
                     /inference="alignment:Splign:2.1.0"
     CDS             16..1500
                     /gene="Dnajc7"
                     /gene_synonym="CCRP"
                     /note="cytoplasmic constitutive active/androstane receptor
                     retention protein; cytoplasmic CAR retention protein; DnaJ
                     (Hsp40) homolog, subfamily C, member 7"
                     /codon_start=1
                     /product="dnaJ homolog subfamily C member 7"
                     /protein_id="NP_998790.2"
                     /db_xref="GeneID:303536"
                     /db_xref="RGD:1303226"
                     /translation="MAATAECDVVMAATEPELLEDEEAKREAESFKEQGNAYYAKKDY
                     NEAYNYYTKAIDMCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLRE
                     GKCHLSLGNAMAACRSFQRALELDHKNAQAQQEFKNANAVMEYEKIAEVDFEKRDFRK
                     VVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQFVASDILRMDSTNADALYVRGL
                     CLYYEDCIEKAVQFFVQALRMAPDHEKACLACRNAKALKAKKEDGNKAFKEGNYKLAY
                     ELYTEALGIDPNNIKTNAKLYCNRGTVNSKLKKLEDAIEDCTNAVKLDDTYVKAYLRR
                     AQCYMDTEQFEEAVRDYEKVYQTEKTKEHKQLLKNAQLELKKSKRKDYYKILGVDKNA
                     SEDEIKKAYRKRALMHHPDRHSGASAEVQKEEEKKFKEVGEAFTILSDPKKKTRYDSG
                     QDLDEEGMNMGDFDANNIFKAFFGGPGGFSFEASGPGNFYFQFG"
     exon            93..181
                     /gene="Dnajc7"
                     /gene_synonym="CCRP"
                     /inference="alignment:Splign:2.1.0"
     exon            182..306
                     /gene="Dnajc7"
                     /gene_synonym="CCRP"
                     /inference="alignment:Splign:2.1.0"
     exon            307..420
                     /gene="Dnajc7"
                     /gene_synonym="CCRP"
                     /inference="alignment:Splign:2.1.0"
     exon            421..495
                     /gene="Dnajc7"
                     /gene_synonym="CCRP"
                     /inference="alignment:Splign:2.1.0"
     exon            496..614
                     /gene="Dnajc7"
                     /gene_synonym="CCRP"
                     /inference="alignment:Splign:2.1.0"
     exon            615..768
                     /gene="Dnajc7"
                     /gene_synonym="CCRP"
                     /inference="alignment:Splign:2.1.0"
     exon            769..933
                     /gene="Dnajc7"
                     /gene_synonym="CCRP"
                     /inference="alignment:Splign:2.1.0"
     exon            934..1025
                     /gene="Dnajc7"
                     /gene_synonym="CCRP"
                     /inference="alignment:Splign:2.1.0"
     exon            1026..1099
                     /gene="Dnajc7"
                     /gene_synonym="CCRP"
                     /inference="alignment:Splign:2.1.0"
     exon            1100..1246
                     /gene="Dnajc7"
                     /gene_synonym="CCRP"
                     /inference="alignment:Splign:2.1.0"
     exon            1247..1399
                     /gene="Dnajc7"
                     /gene_synonym="CCRP"
                     /inference="alignment:Splign:2.1.0"
     exon            1400..1462
                     /gene="Dnajc7"
                     /gene_synonym="CCRP"
                     /inference="alignment:Splign:2.1.0"
     exon            1463..1771
                     /gene="Dnajc7"
                     /gene_synonym="CCRP"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggtcccggcg gtaagatggc ggctaccgcg gagtgcgatg tggtaatggc ggcgaccgaa
       61 cctgaactgc tggaggacga agaagcaaag agggaagcag aatccttcaa ggaacaaggg
      121 aatgcatatt atgctaagaa ggactacaat gaagcttata actattatac aaaagccata
      181 gatatgtgtc ctaaaaatgc cagctattac ggtaatcgag cagccacatt gatgatgctt
      241 ggacggttcc gggaagctct tggagatgcg cagcagtcag tgaggctgga tgacagtttt
      301 gtccggggac acctccgaga aggcaagtgc catctctcac ttgggaatgc aatggcagca
      361 tgtcgtagtt tccaaagagc cctagaactg gatcataaaa atgcccaggc acagcaggag
      421 ttcaagaatg ccaatgcggt catggagtat gagaaaatag cagaagtgga ttttgaaaag
      481 cgagatttcc ggaaggttgt tttctgcatg gaccgtgccc tagaatttgc ccctgcctgc
      541 catcgattca aaatcctcaa agcagaatgc ttagcgatgc ttggtcgata cccagaagca
      601 cagtttgtgg ccagtgacat tttacgaatg gattccacca atgctgatgc tctgtatgtc
      661 cggggtcttt gcctttatta tgaagactgt attgagaagg cagtgcagtt ttttgtacag
      721 gctctcagga tggctcctga ccacgagaag gcttgtcttg cttgtagaaa tgccaaagcc
      781 cttaaagcca agaaagaaga tgggaataaa gcctttaagg aagggaatta caagctagca
      841 tatgaactgt acacagaagc cttggggata gatcccaaca acataaaaac aaatgctaaa
      901 ctctactgta atcggggtac ggttaattcc aagcttaaga aactagaaga cgccatagaa
      961 gactgtacaa atgcagtgaa gcttgatgac acttacgtca aagcctactt gagaagagct
     1021 cagtgttaca tggacacgga gcagtttgaa gaagctgtgc gggactatga aaaggtctat
     1081 cagacggaga aaacaaaaga acacaaacag ctccttaaga atgcacagct ggaactgaag
     1141 aagagcaaga ggaaagatta ctacaagatc ctgggcgttg acaagaatgc ctctgaggac
     1201 gagatcaaga aagcttaccg gaaacgggcc ctgatgcacc atccggatcg tcacagtggg
     1261 gccagtgccg aagtgcagaa ggaggaggag aagaagttta aggaagtggg agaggccttt
     1321 accatcctct ctgatcctaa gaaaaagact cgttatgaca gtggacagga tctggatgag
     1381 gagggcatga atatgggcga ttttgatgca aacaacatct tcaaggcatt ctttggtggt
     1441 cctgggggct tcagctttga agcatctggc ccaggaaatt tctactttca gtttggctaa
     1501 tgaaggtcaa ctacttagac cccagaaaat gcagacttgg tttacccatg agtgtggaca
     1561 gttctcctcc tccatcatgt ccatgtgtac ttagagcagg ttcgttttct cagtcaggtg
     1621 ccctgtgtct gtatgagggg tgaaggaaag ggagccagtg ctgaggacaa gggagggagg
     1681 gaagccaggg gtagacaggg aggcagcttg tgaatttttg ttgtattgtt taactttatt
     1741 aaaaaagaaa aaataaaatg tcttgaccat t
//
