LOCUS       NM_206845               4578 bp    mRNA    linear   ROD 10-FEB-2025
DEFINITION  Rattus norvegicus DnaJ heat shock protein family (Hsp40) member C27
            (Dnajc27), mRNA.
ACCESSION   NM_206845 XM_001063374 XM_001070274 XM_233943
VERSION     NM_206845.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4578)
  AUTHORS   Chen,T., Yang,M., Yu,Z., Tang,S., Wang,C., Zhu,X., Guo,J., Li,N.,
            Zhang,W., Hou,J., Liu,H., Han,C., Liu,Q., Gu,Y., Qian,C., Wan,T.,
            Cui,L., Zhu,M., Zheng,W. and Cao,X.
  TITLE     Small GTPase RBJ mediates nuclear entrapment of MEK1/MEK2 in tumor
            progression
  JOURNAL   Cancer Cell 25 (5), 682-696 (2014)
   PUBMED   24746703
  REMARK    Erratum:[Cancer Cell. 2021 Mar 8;39(3):438-440. doi:
            10.1016/j.ccell.2021.02.010.. PMID: 33689704]
REFERENCE   2  (bases 1 to 4578)
  AUTHORS   Nepomuceno-Silva,J.L., de Melo,L.D., Mendonca,S.M., Paixao,J.C. and
            Lopes,U.G.
  TITLE     RJLs: a new family of Ras-related GTP-binding proteins
  JOURNAL   Gene 327 (2), 221-232 (2004)
   PUBMED   14980719
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            DY314277.1, BK001286.1 and JAXUCZ010000006.1.
            
            On Jul 3, 2010 this sequence version replaced NM_206845.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.927168.1,
                                           SRR26360176.1443898.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-176               DY314277.1         1-176
            177-998             BK001286.1         1-822
            999-4578            JAXUCZ010000006.1  32814364-32817943
FEATURES             Location/Qualifiers
     source          1..4578
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q14"
     gene            1..4578
                     /gene="Dnajc27"
                     /gene_synonym="Rbj"
                     /note="DnaJ heat shock protein family (Hsp40) member C27"
                     /db_xref="GeneID:298859"
                     /db_xref="RGD:1564414"
     exon            1..263
                     /gene="Dnajc27"
                     /gene_synonym="Rbj"
                     /inference="alignment:Splign:2.1.0"
     CDS             177..998
                     /gene="Dnajc27"
                     /gene_synonym="Rbj"
                     /EC_number="4.6.1.1"
                     /note="rab and DnaJ domain-containing protein; rab and
                     DnaJ domain containing; DnaJ (Hsp40) homolog, subfamily C,
                     member 27"
                     /codon_start=1
                     /product="dnaJ homolog subfamily C member 27"
                     /protein_id="NP_996727.2"
                     /db_xref="GeneID:298859"
                     /db_xref="RGD:1564414"
                     /translation="MESNVPKRKEPLKSLRIKVISMGNAEVGKSCIIKRYCEKRFVSK
                     YLATIGIDYGVTKVQVRDREIKVNIFDMAGHPFFFEVRNEFYKDTQGVILVYDVGQKD
                     SFDALDSWLAEMKQELGPHGNMENIVFVVCANKIDCSKHRCIDESEGRLWAESRGFLY
                     FETSAQTGEGINEMFQTFYMSIVDLCENGGKRPTANSSASYTKEQADTIRRIRTSKDS
                     WEMLGVRPGASREEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIK"
     exon            264..346
                     /gene="Dnajc27"
                     /gene_synonym="Rbj"
                     /inference="alignment:Splign:2.1.0"
     exon            347..416
                     /gene="Dnajc27"
                     /gene_synonym="Rbj"
                     /inference="alignment:Splign:2.1.0"
     exon            417..581
                     /gene="Dnajc27"
                     /gene_synonym="Rbj"
                     /inference="alignment:Splign:2.1.0"
     exon            582..704
                     /gene="Dnajc27"
                     /gene_synonym="Rbj"
                     /inference="alignment:Splign:2.1.0"
     exon            705..865
                     /gene="Dnajc27"
                     /gene_synonym="Rbj"
                     /inference="alignment:Splign:2.1.0"
     exon            866..4578
                     /gene="Dnajc27"
                     /gene_synonym="Rbj"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgccgcttcc caaccgcccg cgtccgtccg cggccaggca gcggtgggga tggcgagccg
       61 cggagccagg gtggtgacga gcgcagcggc tccgtcattg ggcgaggagg cctgagggac
      121 gggctggctg ggtgcttaag gacaccagaa cccgcggccc cagcagagcg aaggcaatgg
      181 agtccaacgt gccgaagcgg aaggagcccc tcaagtccct ccgcatcaaa gtcatctcca
      241 tgggcaacgc cgaagtgggg aaaagctgca ttataaaacg ctactgtgag aagagatttg
      301 tgtctaaata cctggccacc attgggattg actatggagt cacaaaggtc caagtcagag
      361 acagagaaat caaagttaac atctttgaca tggctggaca tcccttcttc tttgaggtcc
      421 gaaatgaatt ctacaaggac acacaaggtg tgatactggt ctatgacgtt gggcagaaag
      481 actcatttga cgcccttgat tcatggctgg cagaaatgaa gcaagagctt gggcctcatg
      541 ggaacatgga gaatattgtc tttgttgtat gtgccaacaa gattgactgc tctaaacacc
      601 gctgcattga tgaaagtgag gggcgtctct gggctgaaag cagagggttc ctgtactttg
      661 aaacatcagc acagactgga gaggggatca acgagatgtt ccagaccttt tacatgtcca
      721 tagttgactt gtgtgaaaat gggggcaagc gtcctaccgc aaatagcagt gctagctaca
      781 ccaaagaaca agcggacacc attcgccgaa tccggactag taaggacagc tgggagatgc
      841 tgggagtcag acctggggcc tcaagggagg aagtcaataa ggcctaccgg aagctggctg
      901 tgctgcttca cccagacaag tgtgtagctc ctggtagtga agatgccttc aaagcagttg
      961 tgaacgcccg gacagctctc ctgaaaaaca tcaagtagag gcagcggaaa ctacaggcaa
     1021 gcttaagtgc agacagactc cctttgaggt gaaataacca acatggagtt tccttcacaa
     1081 atgctcactg ttgtgtcccc tcccttgtgt attaatagta tgggtgcctg ttaccgtgtg
     1141 gtggccattt ctcagtgaga tgaccgattt tgggtgagag atagcctcgc atctcttatg
     1201 cacttcatag cttattgcca gatgactggg tgtttgtcat tgtgtcatcg tttatgcatt
     1261 cacctgagtc catgaccatg actcacctga gcttcctccc accaacccac cacccgtcca
     1321 tctgcccacc atcagagaag ggaataacaa caggaaggag gatggcagga actagcagtt
     1381 ggcacccagc ccctgggagc cttgcacgct ctgagcagtc tcttggttag tattttaacc
     1441 atcagcctac atagttagta gccaggcatg gtggcatgtg cctgtaatcc cagcactcag
     1501 gaggatgagg caggaggatt gtgagtttga agccagtctg gattggatta ttcagcaaga
     1561 ctgtcaaaga gaaaccagca cctttgtaga agatgtgatg tgagttgaca ctgttctgtc
     1621 tgcccgccct tccagaacac tgactctgtt ctttctccag ccaccagggg gagacaagcc
     1681 agtactaaga gagaggcagt gccagccaca ggagctggag accctgaagc tcatcctgga
     1741 tcccaggtct ttactctgcc ctagaaatag ttgccactag caggcagcag agaattctgt
     1801 gttcctggga atgagggacc agaaaccaga acagaagcac tcggagggca cgctgtagat
     1861 tactcgggaa tgaatgtgtg ctcagccagc ttgggctttt cctgagctcc ggcctgttgg
     1921 gcactaagaa gggcctgcca taaggcttgt ccctgtcctc agtccccacc acaagggcag
     1981 gtgagaggca ggcaggcgct cttctgcaag ccggtctctt ccttctgcac ccgtgttaat
     2041 ctgtttctcc tctcttcctg ctctgttgtt acaccccaca tctgccattg cctttcttct
     2101 tgaatccctg gcattgcccc gggctcagct gacttgaaat aagtaggacc catttggggc
     2161 acagtaggac atcttgggcc tgtgtggggc agaatcccta cagtttctaa agtttctgct
     2221 tggactccaa atttctgaat agtattttta aactacaagt atgacagctg atgttgcata
     2281 gagaagcctt actcatggtg ttgttcctgc ctggtccaca ggactggatg gagctggcgg
     2341 agcactggga ctcatgtcag ccttagggga gcaggcccac ttctcgattc ctgtcatccc
     2401 tcttaactgt gtcttatttt gagctgcagc tacctgtgct acctggaact caaaggatgt
     2461 aaagcatcac caggctatga cttttaaatc cctaccccat aatggttgca gataacatct
     2521 ctctcaccta agaagacacg ctcttgtctt actgtctaaa cacttgctgt cttctgggtt
     2581 ttctcctttc tccacagtag cctcaccttg catggtgagt ttaaaatgtt cttaatgaac
     2641 tcagacccat ataaaaaagg taaagagatc tggtatatgg ctttatggct ttttctagcc
     2701 cctgaatttg cttctgagat gattaaactc cacttcaacg ttcctgtggg tctcagttct
     2761 gcctgaggcc tctctcacgc ctaacatgtc cgattgtcca actgctcctg gaacagaagg
     2821 tgggagtcct gaggatgagg gattgtgcat ggtgcagtca gccccagtgt ggggccccgt
     2881 cttcgcctca ttcagcgaca tgggcagctg agcagttacg gcaggacact ttcccactca
     2941 tatccctccc tgctgatgtg gtctctgctt cattcttaga tcttgagact ctgtttctga
     3001 catcttagtt actaacattt agggtggcta catagtattt atttatttat gtaatagtaa
     3061 taaaatgaaa aagttaagtc tcagggtccc agaatttttc tgatttctat aatccatcag
     3121 cagagcatta agaaacaaca gagcatgcct ccagatgtaa agtgttttga gtcctggctt
     3181 cacgatccgg tacagacctc tccgttcatt taaactctca gtgcaggcgt gtgctttgtc
     3241 gttccacatt ttgaaaacta tttgcacagt tgagatctta gaccatcagc aggagttgca
     3301 actcagtcat ttcagtggct gagaatttgt ttataaataa ccttgtttcc caaaaaaagg
     3361 gttaaaatat ttgaacaact gttattaaag aaagctgtgt cctcctccac ctgagtcacc
     3421 aaccagtgtc acctcttcac cttgttggga atgtctggag gcatttcaga gttggtcttc
     3481 caaccttcgc aagcacttta gatccccctc cctttgtgtc tgtgttctct tgtgcctcct
     3541 tgggaactgc tagtcctcac tctcagtatc tgacttaagc actgccactt tacttctcca
     3601 tttaaatgtg tctgtggctt taccagcctg ttaacttacg agtccagatg ttgaggataa
     3661 gatgctgtcc ttctataaac tgtacaccat tctttaaggc ttgtatttac tcaggaaacg
     3721 tattctagta tcttctcact gattgaaatc tcaagtgaca aatacttctt tatacctgca
     3781 aaatggtacc taattccttc ttagttcatg agccataggt caggcagcta gatggtcagt
     3841 gagccatagg tccggtggct agatggctga aaccttcgtc agagtagaac aaggagctcc
     3901 tgccagcact gagtcaggga caaatggctg ttccacccag agtggcagga ggacaggctt
     3961 gccatctgaa gctaggaagc aaggagctgg catgttgtct ctagcaatga caatgctccc
     4021 tcctgggtca gctcagaagg ttctggaacc gtgcttctct catactcagc ccatggagct
     4081 aaggccccag cagttttcta aaactttcaa agatgaattt agttgcaaaa tcaagctaag
     4141 caatttccac tgcaggcttt acaaagagct gttggtcctc tcatcctggt gctgagcaca
     4201 attttagaca tggttagtgc cccttggaca ttgattgctc cattaactgt ccctggggag
     4261 gatgaaggtg tttacttgtg gtatgggcgc agtgggtctg tgtcttaatg cacagtgcgg
     4321 tgctgggcac gctgggaaag gccctgggtg aaagggctgt tactgaagag ctggacagtt
     4381 tgggtttgat cactccccgt gctgatcgcc ccctcgcatt ctttcccttg actgtgaatg
     4441 ctcttacaag gtaatttaca tatttgcttt ctgttgaaat aactgaaagt gttaaatcta
     4501 ccagttgtgt atgtcttgta tacagagtgt catatgtatt aagttgtgta tttttataga
     4561 gtaaagtcaa atagcaaa
//
