LOCUS       NM_001191853             801 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus DnaJ heat shock protein family (Hsp40) member C24
            (Dnajc24), mRNA.
ACCESSION   NM_001191853 XM_342483
VERSION     NM_001191853.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 801)
  AUTHORS   Thakur,A., Chitoor,B., Goswami,A.V., Pareek,G., Atreya,H.S. and
            D'Silva,P.
  TITLE     Structure and mechanistic insights into novel iron-mediated
            moonlighting functions of human J-protein cochaperone, Dph4
  JOURNAL   J Biol Chem 287 (16), 13194-13205 (2012)
   PUBMED   22367199
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Jul 17, 2010 this sequence version replaced XM_342483.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FM089292.1, SRR26360181.1986602.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-41                JAXUCZ010000003.1  112940600-112940640 c
            42-188              JAXUCZ010000003.1  112939787-112939933 c
            189-327             JAXUCZ010000003.1  112920251-112920389 c
            328-396             JAXUCZ010000003.1  112909913-112909981 c
            397-801             JAXUCZ010000003.1  112905369-112905773 c
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q33"
     gene            1..801
                     /gene="Dnajc24"
                     /gene_synonym="Dph4; RGD1564710; Zcsl3"
                     /note="DnaJ heat shock protein family (Hsp40) member C24"
                     /db_xref="GeneID:362184"
                     /db_xref="RGD:1564710"
     exon            1..41
                     /gene="Dnajc24"
                     /gene_synonym="Dph4; RGD1564710; Zcsl3"
                     /inference="alignment:Splign:2.1.0"
     exon            42..188
                     /gene="Dnajc24"
                     /gene_synonym="Dph4; RGD1564710; Zcsl3"
                     /inference="alignment:Splign:2.1.0"
     CDS             81..527
                     /gene="Dnajc24"
                     /gene_synonym="Dph4; RGD1564710; Zcsl3"
                     /note="zinc finger, CSL-type containing 3; DPH4 homolog
                     (JJJ3, S. cerevisiae); DnaJ (Hsp40) homolog, subfamily C,
                     member 24"
                     /codon_start=1
                     /product="dnaJ homolog subfamily C member 24"
                     /protein_id="NP_001178782.1"
                     /db_xref="GeneID:362184"
                     /db_xref="RGD:1564710"
                     /translation="MAFEQTVKKDWYSILGADPSADVSDLKQKYQKLILLYHPDKQSA
                     DVPAGTMEECVQKFIEIDQAWKILGNEETKKKYDLQRHEDELRNVGPVDAQVHLEEMS
                     WNKDEESFSLSCRCGGKYTVYKDEAQEANLISCDTCSLIVELLHQS"
     exon            189..327
                     /gene="Dnajc24"
                     /gene_synonym="Dph4; RGD1564710; Zcsl3"
                     /inference="alignment:Splign:2.1.0"
     exon            328..396
                     /gene="Dnajc24"
                     /gene_synonym="Dph4; RGD1564710; Zcsl3"
                     /inference="alignment:Splign:2.1.0"
     exon            397..801
                     /gene="Dnajc24"
                     /gene_synonym="Dph4; RGD1564710; Zcsl3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gccgcggctg caagtggact cctaccccag tgtggaacgt gggtatcaga gaaggccccc
       61 ttctggtttg aaggacgctg atggcttttg agcagacagt caaaaaggat tggtatagca
      121 ttctaggggc agacccatct gcagatgtgt cagacctaaa acaaaagtat cagaaactca
      181 tattactgta tcatccagat aaacaaagtg cagatgtgcc agcaggaacc atggaggagt
      241 gtgtgcagaa gttcattgaa attgatcagg catggaaaat tttagggaat gaagaaacca
      301 agaaaaagta tgacctgcag cggcatgaag atgagctaag aaatgtgggg ccagtagatg
      361 cacaggtaca ccttgaagag atgtcctgga acaaagatga ggagtctttc tctctgagct
      421 gtcgatgtgg tgggaagtac actgtctaca aagatgaagc acaagaagca aaccttattt
      481 cctgtgatac gtgctcactg attgtggaac tccttcatca gagctgagct gagtgttcat
      541 ccctggggtg ctttaactac aaggagaagg atgctttttg ttattagctg tataatttgt
      601 gaagatgatg aaatcttcaa gcaaagacca ccagattaac aaataaattc agttgtttat
      661 atatctaaaa tgtaaattat aggatattac aaaaaaggac ttgagtaata tttttgcatt
      721 cttagctaac aacttttgtt ttctctttgg tacaaaccga ttatttgcct tttgaaatat
      781 aagtatcttt ttcaaaaatc a
//
