LOCUS       NM_001014204            1371 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus DnaJ heat shock protein family (Hsp40) member C22
            (Dnajc22), mRNA.
ACCESSION   NM_001014204 XM_343329
VERSION     NM_001014204.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1371)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1371)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC086949.1.
            
            On Apr 20, 2005 this sequence version replaced XM_343329.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC086949.1, SRR8487226.183246.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132263, SAMD00132264
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1371
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q36"
     gene            1..1371
                     /gene="Dnajc22"
                     /gene_synonym="RGD1311098"
                     /note="DnaJ heat shock protein family (Hsp40) member C22"
                     /db_xref="GeneID:362998"
                     /db_xref="RGD:1311098"
     exon            1..65
                     /gene="Dnajc22"
                     /gene_synonym="RGD1311098"
                     /inference="alignment:Splign:2.1.0"
     exon            66..1006
                     /gene="Dnajc22"
                     /gene_synonym="RGD1311098"
                     /inference="alignment:Splign:2.1.0"
     CDS             167..1192
                     /gene="Dnajc22"
                     /gene_synonym="RGD1311098"
                     /note="DnaJ (Hsp40) homolog, subfamily C, member 22"
                     /codon_start=1
                     /product="dnaJ homolog subfamily C member 22"
                     /protein_id="NP_001014226.1"
                     /db_xref="GeneID:362998"
                     /db_xref="RGD:1311098"
                     /translation="MAKGLLMTYALWAFGGPVGLHHLYLGRDSHALLWMLTLGGGGLG
                     WLWEFWKLPSFVAQANGVQSWKQRPEEERPPLSLLRFASQMVVGVYFGLVALISLSST
                     ANFYIVGLPLAVGLGVLLVAAVGNQTSDFKNTLGAAFLTSPVFYGRPIAILPISLAAS
                     ITAQKHRRYKVSAVSETLSVRLYRVGLAYLAFTGPLAYSTLYNTAATINYAAETLGSF
                     LSWFNFFPLLGRLVESVLLLPCRIWWLLVGAPGFNSSQFQEWEKLYEFVDSFQDEKRQ
                     LAHQVLGIPEGATNEEIHRSYRDLVKVWHPDHNRHQTEEAQRHFLEIQAAYEVLSQPK
                     KPRASWR"
     exon            1007..1348
                     /gene="Dnajc22"
                     /gene_synonym="RGD1311098"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctggtctgaa gcggcttggc agcctgagca gtcaggtact gcggctctac tggcactgcc
       61 tgagggtcca aggactgtgg tgattctcat ggaggaccct gagatttctg caatctgatc
      121 agtgtcaaat gccactggat tcgctctgag actcttgccc tagaggatgg ccaaagggct
      181 cctgatgacc tatgcccttt gggcttttgg gggccctgtt ggactacacc acctgtatct
      241 gggaagggac agccatgccc tgctctggat gctcaccctg ggaggtggtg ggttgggctg
      301 gctctgggaa ttctggaagc ttccaagctt tgtggctcaa gccaacggag tccagagctg
      361 gaaacagagg ccagaagagg agagaccccc tctgagtctc cttcgctttg cttcccagat
      421 ggtagtaggt gtctattttg gtctcgtggc tctgatcagc ctttcttcca cagccaactt
      481 ctatatagtg ggcctcccac tggccgttgg cttaggggtc ttgctggtag ctgctgttgg
      541 taaccagacc tcagacttta agaacacctt aggagcagcc ttcctcactt cccctgtgtt
      601 ctatggccgc cccatagcca tcctgcccat cagtttggct gccagcatta cagcccagaa
      661 gcatcgccga tacaaagttt cagcagtgtc agagacactt agtgtgcgcc tctaccgtgt
      721 gggcttagct tacctcgcct tcacaggccc actggcctac agtaccctgt acaatacagc
      781 tgccaccatt aactacgcag cagaaaccct tggttctttc ttgagttggt tcaacttttt
      841 cccacttctc ggtcgtctcg tggagtctgt cttgcttctg ccttgccgga tctggtggct
      901 actggttggg gctcctggct tcaatagcag ccagttccag gaatgggaaa agctctatga
      961 atttgttgac agttttcagg atgagaaacg tcagctggct caccaggttc tgggcattcc
     1021 agaaggagcc accaatgaag aaatacatcg gagttaccga gacctggtga aggtctggca
     1081 cccagaccac aaccggcacc agacggagga ggcccagagg cacttcctag agatccaggc
     1141 tgcctatgaa gtcttgagtc agcccaagaa gcccagagca tcctggaggt gaaagcaacc
     1201 cctcaaggat gggctcagtc ttgtcagcac agtcttcaaa acccaggacc taacagtctt
     1261 aaagaagctg ctcgatagag gcgaggggaa ctttaaagga atgaggaagc atgtggtaga
     1321 aaatatattt atgtgttaaa tttctaaaaa aaaaaaaaaa aaaaaaaaaa a
//
