LOCUS       NM_001191740            1004 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus DnaJ heat shock protein family (Hsp40) member C17
            (Dnajc17), mRNA.
ACCESSION   NM_001191740 XM_230468
VERSION     NM_001191740.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Slater,L.H., Hett,E.C., Clatworthy,A.E., Mark,K.G. and Hung,D.T.
  TITLE     CCT chaperonin complex is required for efficient delivery of
            anthrax toxin into the cytosol of host cells
  JOURNAL   Proc Natl Acad Sci U S A 110 (24), 9932-9937 (2013)
   PUBMED   23716698
REFERENCE   2  (bases 1 to 1004)
  AUTHORS   Amendola,E., Sanges,R., Galvan,A., Dathan,N., Manenti,G.,
            Ferrandino,G., Alvino,F.M., Di Palma,T., Scarfo,M., Zannini,M.,
            Dragani,T.A., De Felice,M. and Di Lauro,R.
  TITLE     A locus on mouse chromosome 2 is involved in susceptibility to
            congenital hypothyroidism and contains an essential gene expressed
            in thyroid
  JOURNAL   Endocrinology 151 (4), 1948-1958 (2010)
   PUBMED   20160132
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Jul 17, 2010 this sequence version replaced XM_230468.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.88858.1,
                                           SRR26360181.2706361.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-105               JAXUCZ010000003.1  126649464-126649568 c
            106-175             JAXUCZ010000003.1  126629321-126629390 c
            176-234             JAXUCZ010000003.1  126628990-126629048 c
            235-322             JAXUCZ010000003.1  126628638-126628725 c
            323-408             JAXUCZ010000003.1  126627341-126627426 c
            409-505             JAXUCZ010000003.1  126627031-126627127 c
            506-549             JAXUCZ010000003.1  126624491-126624534 c
            550-627             JAXUCZ010000003.1  126624058-126624135 c
            628-708             JAXUCZ010000003.1  126623475-126623555 c
            709-819             JAXUCZ010000003.1  126622913-126623023 c
            820-1004            JAXUCZ010000003.1  126616043-126616227 c
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q35"
     gene            1..1004
                     /gene="Dnajc17"
                     /gene_synonym="RGD1308015"
                     /note="DnaJ heat shock protein family (Hsp40) member C17"
                     /db_xref="GeneID:311329"
                     /db_xref="RGD:1308015"
     exon            1..105
                     /gene="Dnajc17"
                     /gene_synonym="RGD1308015"
                     /inference="alignment:Splign:2.1.0"
     CDS             28..939
                     /gene="Dnajc17"
                     /gene_synonym="RGD1308015"
                     /note="DnaJ (Hsp40) homolog, subfamily C, member 17"
                     /codon_start=1
                     /product="dnaJ homolog subfamily C member 17"
                     /protein_id="NP_001178669.1"
                     /db_xref="GeneID:311329"
                     /db_xref="RGD:1308015"
                     /translation="MAVTKELLQMDLYALLGIEEKAADKEVKKAYRQKALSCHPDKNP
                     DNPRAAELFHQLSQALEVLTDAAARAAYDKVRKARKQAAERTQRLDEKRKKVKLDLEA
                     RERQAQAQGTEEEEESRSTTTLEQEIARLREEGSRQLEEQQRLIQEQIRQDREQRLRG
                     RTENTEGKGTPKLKLKWKCKKEDESQGGYSRDILLRLLQKYGEVLNLVLSKKKAGNAI
                     VEFATVRAAELAVRNEVGLADNPLKVSWLEGQPQGTVDPSPPGLSKGSVLSERDYESL
                     VMMRMRQAAERQQLIAQMQQEDEGRPT"
     exon            106..175
                     /gene="Dnajc17"
                     /gene_synonym="RGD1308015"
                     /inference="alignment:Splign:2.1.0"
     exon            176..234
                     /gene="Dnajc17"
                     /gene_synonym="RGD1308015"
                     /inference="alignment:Splign:2.1.0"
     exon            235..322
                     /gene="Dnajc17"
                     /gene_synonym="RGD1308015"
                     /inference="alignment:Splign:2.1.0"
     exon            323..408
                     /gene="Dnajc17"
                     /gene_synonym="RGD1308015"
                     /inference="alignment:Splign:2.1.0"
     exon            409..505
                     /gene="Dnajc17"
                     /gene_synonym="RGD1308015"
                     /inference="alignment:Splign:2.1.0"
     exon            506..549
                     /gene="Dnajc17"
                     /gene_synonym="RGD1308015"
                     /inference="alignment:Splign:2.1.0"
     exon            550..627
                     /gene="Dnajc17"
                     /gene_synonym="RGD1308015"
                     /inference="alignment:Splign:2.1.0"
     exon            628..708
                     /gene="Dnajc17"
                     /gene_synonym="RGD1308015"
                     /inference="alignment:Splign:2.1.0"
     exon            709..819
                     /gene="Dnajc17"
                     /gene_synonym="RGD1308015"
                     /inference="alignment:Splign:2.1.0"
     exon            820..1004
                     /gene="Dnajc17"
                     /gene_synonym="RGD1308015"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agtatcaatt caagttagac tagaaccatg gcggtgacca aagagctctt acaaatggat
       61 ctgtacgcgc tgctgggcat tgaagagaag gcggcagaca aagaggtgaa aaaggcctac
      121 aggcaaaaag cactctcctg ccacccagac aaaaatccag ataaccccag agcagctgaa
      181 ctcttccacc agctgtccca ggccttggag gtactgactg atgctgcagc cagggctgca
      241 tatgacaagg tgaggaaagc caggaagcag gctgcagaga ggacccagag acttgatgag
      301 aaaaggaaga aagtgaagct tgacctggaa gccagggagc ggcaggccca ggcccagggt
      361 actgaggaag aggaggagag caggagcacc accacactag agcaggagat tgctcgcctt
      421 cgagaagagg gttcccgtca actggaagag cagcaaaggc tgatccagga gcagatccgc
      481 caggaccgag aacagaggct gagaggaaga accgaaaata cagaaggcaa aggaaccccc
      541 aaactaaagc tgaagtggaa gtgcaagaag gaggatgagt cccagggtgg ctactccaga
      601 gacatcctcc tgaggctttt acaaaagtat ggggaggttc tcaacttggt actttccaaa
      661 aagaaggcag gcaacgccat agtggagttt gcaactgtca gagcggcgga gctggccgtc
      721 agaaatgaag tgggcctggc tgacaaccct ctgaaggttt cctggttgga gggacagccc
      781 cagggcacag tggaccccag ccccccagga ctgtcgaagg gctcagtgct gtcagaaagg
      841 gactatgaga gtctggtcat gatgcgcatg cgccaggccg ctgagcgcca gcagctgatt
      901 gcccagatgc agcaggaaga tgaggggcgg cccacgtagc cccgacttca gccttcccac
      961 cccacaccct tttgagtcat caccaataaa ctttttaaaa aaca
//
