LOCUS       NM_001109193            1729 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus DnaJ heat shock protein family (Hsp40) member B14
            (Dnajb14), mRNA.
ACCESSION   NM_001109193 XM_001078145 XM_575045
VERSION     NM_001109193.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1729)
  AUTHORS   Li,K., Jiang,Q., Bai,X., Yang,Y.F., Ruan,M.Y. and Cai,S.Q.
  TITLE     Tetrameric Assembly of K+ Channels Requires ER-Located Chaperone
            Proteins
  JOURNAL   Mol Cell 65 (1), 52-65 (2017)
   PUBMED   27916661
REFERENCE   2  (bases 1 to 1729)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On or before Sep 9, 2010 this sequence version replaced
            XM_575045.3, XM_001078145.2, NM_001109193.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360190.1446520.1,
                                           SRR26643298.13778.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-164               JAXUCZ010000002.1  229032415-229032578
            165-336             JAXUCZ010000002.1  229047471-229047642
            337-482             JAXUCZ010000002.1  229056393-229056538
            483-668             JAXUCZ010000002.1  229069449-229069634
            669-763             JAXUCZ010000002.1  229071494-229071588
            764-873             JAXUCZ010000002.1  229072227-229072336
            874-1040            JAXUCZ010000002.1  229072813-229072979
            1041-1069           JAXUCZ010000002.1  229075217-229075245
            1070-1729           JAXUCZ010000002.1  229075246-229075905
FEATURES             Location/Qualifiers
     source          1..1729
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q43"
     gene            1..1729
                     /gene="Dnajb14"
                     /note="DnaJ heat shock protein family (Hsp40) member B14"
                     /db_xref="GeneID:499716"
                     /db_xref="RGD:1591949"
     exon            1..164
                     /gene="Dnajb14"
                     /inference="alignment:Splign:2.1.0"
     CDS             32..1165
                     /gene="Dnajb14"
                     /note="DnaJ (Hsp40) homolog, subfamily B, member 14"
                     /codon_start=1
                     /product="dnaJ homolog subfamily B member 14"
                     /protein_id="NP_001102663.2"
                     /db_xref="GeneID:499716"
                     /db_xref="RGD:1591949"
                     /translation="MEGNRDEAEKCVQIAREALSAGNRDKAQRFLQKAEKLYPLPAAR
                     ALLEIIMKNGSTAGNSTHCRKPPGSSDQSKPSFGKDGTSGAGEGGKVYTKDQVEGVLS
                     INKCKNYYEVLGVTKDAGDEDLKKAYRKLALKFHPDKNHAPGATDAFKKIGNAYAVLS
                     NPEKRKQYDLTGSEEEACSPQSNGRFNFHRGCEADITPEDLFNIFFGGGFPSGSVHSF
                     SNGRAAYSHQHQHRHSGHEREEERGDGGFSVFIQLMPVIVLILVSLLSQLMVSNPPYS
                     LYPRSGQTIKMQTENLGVVYYVNKDFKSEYKGALLQKVEKSVEEDYVTNIRNNCWKER
                     QQKTDMQYAAKVYRDERLRRKADALSMDNCKELERLTSLYKGG"
     exon            165..336
                     /gene="Dnajb14"
                     /inference="alignment:Splign:2.1.0"
     exon            337..482
                     /gene="Dnajb14"
                     /inference="alignment:Splign:2.1.0"
     exon            483..668
                     /gene="Dnajb14"
                     /inference="alignment:Splign:2.1.0"
     exon            669..763
                     /gene="Dnajb14"
                     /inference="alignment:Splign:2.1.0"
     exon            764..873
                     /gene="Dnajb14"
                     /inference="alignment:Splign:2.1.0"
     exon            874..1040
                     /gene="Dnajb14"
                     /inference="alignment:Splign:2.1.0"
     exon            1041..1729
                     /gene="Dnajb14"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggccgcgg acaccgaggc aggcgcgagc catggagggc aaccgcgacg aggcggagaa
       61 atgcgtgcag atcgctcgcg aggccctgag cgccggcaac cgcgacaagg cccagcgctt
      121 cctgcagaag gccgagaagc tgtacccgct gccggccgcg cgcgcattat tggaaataat
      181 tatgaaaaac ggaagcactg ctggaaatag cacgcattgc cgaaaaccgc cagggagcag
      241 cgaccagagc aagcccagct tcgggaagga tggcacttcc ggtgctggtg aaggcgggaa
      301 agtctacacc aaagaccaag tcgaaggcgt gctcagcata aacaaatgta aaaattacta
      361 cgaagtcctc ggagttacaa aagatgctgg tgatgaagat ttgaaaaaag cttataggaa
      421 gctggctttg aagtttcatc cagacaaaaa ccacgcccct ggagccacgg atgctttcaa
      481 aaagatcgga aatgcgtacg ccgttttaag caatccagag aaacgaaaac agtatgacct
      541 tacaggcagc gaggaggaag cctgtagtcc ccagagcaac ggcaggttca acttccaccg
      601 cggctgcgag gctgacataa ctccggaaga cctgttcaat atcttttttg gcggtggatt
      661 tccttcaggt agtgtacatt cattttcaaa tggccgggct gcttacagcc atcaacatca
      721 gcaccgacac agtgggcacg aaagagaaga agaaagagga gatggaggct tttccgtgtt
      781 tatccagctc atgcctgtca ttgtgctgat ccttgtgtcc ctgttaagcc agctgatggt
      841 ctccaatcct ccgtattcct tataccccag gtctggacaa actattaaaa tgcagacgga
      901 gaacctgggc gtggtgtact acgtcaacaa ggactttaaa agcgaatata aaggagcgct
      961 gttacagaag gtagaaaaga gtgtggaaga ggattacgtg actaacatcc ggaataactg
     1021 ctggaaagaa aggcagcaga aaacagatat gcagtatgca gcaaaagtgt accgtgatga
     1081 acggctacgg aggaaggcgg acgccctgag catggacaac tgcaaagagc tggagcggct
     1141 gaccagcctg tacaagggcg ggtaaccgag tgctgcccgc tcccttcctt gtactgtctt
     1201 ttctgtaaat tccatgtcgc catgaagcga agaagacttg attaaagact aagctgagta
     1261 gttgattcct gagaccttgg actgttaatg atctactggc tcatttcaat agtaagaact
     1321 gaaaactaaa tattttagta tgcttctgca attactttct cttaaaatct tacatgattc
     1381 cttccgaggt ctggagagga ttatcacacc tgtagcaatt gccagttttg tgagtctcca
     1441 gtattccttt gccatgtaaa tatttctagg atgattttgt atacatatga gcgcttgcct
     1501 tttatttaaa ttacgttagt gtttagctcc atgagacact ccgttcaggc cgatggaatg
     1561 gacacagtca catttcccat gaggtgtttg ggtgtgtgca atttaaacaa tgaaaatttt
     1621 tttcaaaaag aaaaaacaaa actttatgta aaatcttata tcagtgtaga aggaatcgac
     1681 acttttaata ttgttcttat atttcagaat atataatgat ataaacgaa
//
