LOCUS       NM_001015021            1933 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus DnaJ heat shock protein family (Hsp40) member B11
            (Dnajb11), mRNA.
ACCESSION   NM_001015021 XM_341007
VERSION     NM_001015021.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1933)
  AUTHORS   Tousson-Abouelazm,N., Papillon,J., Guillemette,J. and Cybulsky,A.V.
  TITLE     Urinary ERdj3 and mesencephalic astrocyte-derived neutrophic factor
            identify endoplasmic reticulum stress in glomerular disease
  JOURNAL   Lab Invest 100 (7), 945-958 (2020)
   PUBMED   32203149
  REMARK    GeneRIF: Urinary ERdj3 and mesencephalic astrocyte-derived
            neutrophic factor identify endoplasmic reticulum stress in
            glomerular disease.
REFERENCE   2  (bases 1 to 1933)
  AUTHORS   Cornec-Le Gall,E., Olson,R.J., Besse,W., Heyer,C.M.,
            Gainullin,V.G., Smith,J.M., Audrezet,M.P., Hopp,K., Porath,B.,
            Shi,B., Baheti,S., Senum,S.R., Arroyo,J., Madsen,C.D., Ferec,C.,
            Joly,D., Jouret,F., Fikri-Benbrahim,O., Charasse,C.,
            Coulibaly,J.M., Yu,A.S., Khalili,K., Pei,Y., Somlo,S., Le Meur,Y.,
            Torres,V.E. and Harris,P.C.
  CONSRTM   Genkyst Study Group; HALT Progression of Polycystic Kidney Disease
            Group; Consortium for Radiologic Imaging Studies of Polycystic
            Kidney Disease
  TITLE     Monoallelic Mutations to DNAJB11 Cause Atypical Autosomal-Dominant
            Polycystic Kidney Disease
  JOURNAL   Am J Hum Genet 102 (5), 832-844 (2018)
   PUBMED   29706351
REFERENCE   3  (bases 1 to 1933)
  AUTHORS   Bernal-Bayard,J., Cardenal-Munoz,E. and Ramos-Morales,F.
  TITLE     The Salmonella type III secretion effector, salmonella leucine-rich
            repeat protein (SlrP), targets the human chaperone ERdj3
  JOURNAL   J Biol Chem 285 (21), 16360-16368 (2010)
   PUBMED   20335166
REFERENCE   4  (bases 1 to 1933)
  AUTHORS   Wong,Y.H., Lu,A.C., Wang,Y.C., Cheng,H.C., Chang,C., Chen,P.H.,
            Yu,J.Y. and Fann,M.J.
  TITLE     Protogenin defines a transition stage during embryonic neurogenesis
            and prevents precocious neuronal differentiation
  JOURNAL   J Neurosci 30 (12), 4428-4439 (2010)
   PUBMED   20335479
REFERENCE   5  (bases 1 to 1933)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   6  (bases 1 to 1933)
  AUTHORS   Meunier,L., Usherwood,Y.K., Chung,K.T. and Hendershot,L.M.
  TITLE     A subset of chaperones and folding enzymes form multiprotein
            complexes in endoplasmic reticulum to bind nascent proteins
  JOURNAL   Mol Biol Cell 13 (12), 4456-4469 (2002)
   PUBMED   12475965
REFERENCE   7  (bases 1 to 1933)
  AUTHORS   Lau,P.P., Villanueva,H., Kobayashi,K., Nakamuta,M., Chang,B.H. and
            Chan,L.
  TITLE     A DnaJ protein, apobec-1-binding protein-2, modulates
            apolipoprotein B mRNA editing
  JOURNAL   J Biol Chem 276 (49), 46445-46452 (2001)
   PUBMED   11584023
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC093384.1.
            
            On Apr 20, 2005 this sequence version replaced XM_341007.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC093384.1, AY387070.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389, SAMEA5760400
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1933
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q23"
     gene            1..1933
                     /gene="Dnajb11"
                     /gene_synonym="LRRGT00084"
                     /note="DnaJ heat shock protein family (Hsp40) member B11"
                     /db_xref="GeneID:360734"
                     /db_xref="RGD:1307373"
     exon            1..248
                     /gene="Dnajb11"
                     /gene_synonym="LRRGT00084"
                     /inference="alignment:Splign:2.1.0"
     CDS             181..1257
                     /gene="Dnajb11"
                     /gene_synonym="LRRGT00084"
                     /note="dnaJ homolog subfamily B member 11; ERdj3; ERj3p;
                     ER-associated dnaJ protein 3; ER-associated Hsp40
                     co-chaperone; liver regeneration-related protein
                     LRRGT00084; ER-resident protein ERdj3; endoplasmic
                     reticulum DNA J domain-containing protein 3; DnaJ (Hsp40)
                     homolog, subfamily B, member 11"
                     /codon_start=1
                     /product="dnaJ homolog subfamily B member 11 precursor"
                     /protein_id="NP_001015021.1"
                     /db_xref="GeneID:360734"
                     /db_xref="RGD:1307373"
                     /translation="MAPQNLSTFCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKA
                     YRKLALQLHPDRNPDDPQAQEKFQDLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSH
                     GDIFSHFFGDFGFMFGGAPRQQDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVA
                     RQAPGKRKCNCRQEMRTTQLGPGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRD
                     GMEYPFIGEGEPHVDGEPGDLRFRIKVVKHRIFERRGDDLYTNVTVSLVEALVGFEMD
                     ITHLDGHKVHISRDKITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEE
                     AKEGIKQLLKQGPVQKVYNGLQGY"
     exon            249..405
                     /gene="Dnajb11"
                     /gene_synonym="LRRGT00084"
                     /inference="alignment:Splign:2.1.0"
     exon            406..503
                     /gene="Dnajb11"
                     /gene_synonym="LRRGT00084"
                     /inference="alignment:Splign:2.1.0"
     exon            504..636
                     /gene="Dnajb11"
                     /gene_synonym="LRRGT00084"
                     /inference="alignment:Splign:2.1.0"
     exon            637..779
                     /gene="Dnajb11"
                     /gene_synonym="LRRGT00084"
                     /inference="alignment:Splign:2.1.0"
     exon            780..862
                     /gene="Dnajb11"
                     /gene_synonym="LRRGT00084"
                     /inference="alignment:Splign:2.1.0"
     exon            863..920
                     /gene="Dnajb11"
                     /gene_synonym="LRRGT00084"
                     /inference="alignment:Splign:2.1.0"
     exon            921..1032
                     /gene="Dnajb11"
                     /gene_synonym="LRRGT00084"
                     /inference="alignment:Splign:2.1.0"
     exon            1033..1192
                     /gene="Dnajb11"
                     /gene_synonym="LRRGT00084"
                     /inference="alignment:Splign:2.1.0"
     exon            1193..1875
                     /gene="Dnajb11"
                     /gene_synonym="LRRGT00084"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcctggctgc tcgccggctt tggggctccc ggaaagtggc agctgaggaa ggggcgcact
       61 acctgtctcc gcggccaggc aagagagaga cccgggcgtg aggcggcctc cttgggctgg
      121 aaaggctggt cagccgacgc agcggcacgg gaggctgaga gggtgggacc aggggacacc
      181 atggccccgc agaacctgag caccttctgc ctgttgctgc tgtacctcat tggggctgtg
      241 atcgccgggc gggatttcta taagatcttg ggagtgcctc gaagcgcctc cataaaggat
      301 attaagaagg cctacaggaa actggccctg cagcttcacc ctgaccggaa ccctgacgac
      361 ccccaagccc aggagaaatt ccaggatctg ggtgctgctt atgaggttct gtcagatagt
      421 gaaaaacgaa aacagtatga tacctatggt gaagaaggct tgaaagatgg gcatcagagc
      481 tcccacgggg acattttttc acacttcttc ggagattttg ggttcatgtt tggaggagcc
      541 cctcgtcagc aggacaggaa tattccaaga ggaagtgaca tcatcgtaga tctagaagtc
      601 accttggaag aagtgtacgc agggaacttt gtggaagtag ttagaaacaa gcccgtagcc
      661 aggcaggctc ctggcaaacg gaaatgcaac tgtcggcagg agatgcgaac cacacagctg
      721 ggaccagggc gcttccaaat gacccaggaa gtggtttgtg acgagtgccc taatgtcaaa
      781 ctagtgaatg aagaacgaac actagaagtg gaaatagagc ctggggtgag agatggcatg
      841 gagtacccct ttattggaga aggtgagcct catgtggatg gggaacccgg agacttacgg
      901 ttccgaatca aagttgtcaa gcaccggata tttgagagga gaggggatga cctgtacaca
      961 aatgtgactg tctcactggt tgaggctctg gttggctttg agatggacat aactcacttg
     1021 gatggtcaca aggtacacat ttcccgggac aagatcacca ggccaggagc caagctgtgg
     1081 aagaaagggg aaggactgcc caactttgat aacaacaaca tcaagggctc cttgataatc
     1141 acctttgatg tggactttcc aaaggagcag ctcacagagg aagcaaaaga aggtatcaag
     1201 cagcttctca aacaagggcc agtgcagaag gtatacaacg ggctgcaggg ctattagaac
     1261 tgaagaactg gactctgaaa gagtggatca gcgatattta ttatctgcag gggtttttgt
     1321 gtgtgtttca ttattttcaa tatgcaagtt tgtcttaatc cttttttccc tgatgatcgt
     1381 catgacacga gctagaggtt tgcgaatctg tctattgcat tcagacaatg accagcagaa
     1441 ggttacctaa tacctctccc tctggggatt taacgtctgg tgctgcccaa ggttcaagga
     1501 ataaagtctc agaggactcc agagcacaga tgagggtcag agacaactgt tagctctttc
     1561 aaaatgccaa ctggagaagt gtgtttttaa atacaccttg ttatttttcc ttgactcctg
     1621 cttctgtttc ccgtgagccg atggtagtct cccatgagga tgggcacaca gcatgcagag
     1681 gaatggtgag cgcccagttc ccaggcccca ctgaacacac atggtgtcta tagcaacgag
     1741 ctcaaagagg cccaatagag tagagactga gccacacgaa ttaaagttac acaaagacct
     1801 cattgtctgt gagagaacat aatttcccga tttctttggt aataataaaa tctgatatgg
     1861 ctattttact gtttaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1921 aaaaaaaaaa aaa
//
