LOCUS       NM_001134736            3084 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus dynein axonemal intermediate chain 3 (Dnai3),
            mRNA.
ACCESSION   NM_001134736 XM_001079375
VERSION     NM_001134736.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3084)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC168204.1.
            
            On Sep 5, 2008 this sequence version replaced XM_001079375.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168204.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00155309,
                                           SAMEA5760383 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3084
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q44"
     gene            1..3084
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /note="dynein axonemal intermediate chain 3"
                     /db_xref="GeneID:292165"
                     /db_xref="RGD:1563105"
     exon            1..105
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
     exon            106..192
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
     CDS             120..2885
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /note="WD repeat-containing protein 63; WD repeat domain
                     63; dynein intermediate chain 3, axonemal"
                     /codon_start=1
                     /product="dynein axonemal intermediate chain 3"
                     /protein_id="NP_001128208.1"
                     /db_xref="GeneID:292165"
                     /db_xref="RGD:1563105"
                     /translation="MAPKAQKSPKGQRKGKKKTKQQSLVSEEEEPMNMESMGHPEIYP
                     LVLTAKTQEIFNCRIDEDMTDEQTYKLIKKEDILADLQNRAAVSDFHPVKKIVLEYPG
                     EELLLVYDKDFKYGLNFYLIGTEEGKENFLKAPEIPEEQEDLKEHVPEDVYIYKPPVS
                     KPWISLGSEKEIEEESVQESKKRVTYMISRKRSQFGAPVTFRDQNASSVKDAYIECTS
                     YPDKSYTLTQVEKDIGLQVIAEVKDTSTQTRWAFPRNATTQYYPREFSEEEKNVLVES
                     KSLAEFFSTVSTSVEIALQQNEIMNTFTDDWRSLAEEESTFGDKTDTHLKEYQSFTDL
                     HNTMEKMITCVSWHPTIYGLIVVSVAVRLSYEERVQNSSRLLLQPSLILFWSFSDPIH
                     PQLMLESPDDIFCFEFCPSDPNIIAGGCINGQIILWDITAHAERIENIKTGGSRSKKA
                     TLKPMFLLEPDSNKEIMYVRHCAVSSIENGHRKVITDIHWLPDSFEINRMGSVFENRS
                     GINCQLITCSADCTICFWDIRPQKPTVTSAATATTTSTTNTNPQQPPAEKKKEESIEI
                     PFDVPSTFLHLDLSWKPLSRIKLSKGETSLDHCPTKLSLGEDPALCKIQGTSSIHVLL
                     RDKMLSQMKLLKAAEINPYQNLEGGMANMLKPIEDFRTKFFVGTEEGEVIYTDWKMER
                     DSETGRLMAKKPVNLYTVHDGAVHTVQRSPFFNDIILTVGGWNVAIWKEEVLTGPLLQ
                     TCCAPKRYTAGHWSLTRPGVFYIGREDGYVDIWDLLEKTHEPAQSQSICITMITYIKP
                     WTFSSKQQFIAIADYYGTLHILEIPWTLSHPSTNEVSSVNYYFEREVKHLEYVQQRKE
                     IREEEKKAMAMEMIKKKAKTYHRSKEQMEAELKLEYESYLELEQSVLFALGLGKVSEK
                     MSYLDLH"
     exon            193..231
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
     exon            232..413
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
     exon            414..518
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
     exon            519..668
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
     exon            669..868
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
     exon            869..985
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
     exon            986..1176
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
     exon            1177..1301
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
     exon            1302..1391
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
     exon            1392..1478
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
     exon            1479..1607
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
     exon            1608..1681
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
     exon            1682..1877
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
     exon            1878..1965
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
     exon            1966..2126
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
     exon            2127..2190
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
     exon            2191..2321
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
     exon            2322..2526
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
     exon            2527..2618
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
     exon            2619..2741
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
     exon            2742..3046
                     /gene="Dnai3"
                     /gene_synonym="RGD1563105; Wdr63"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atttttctgg gcgagaagag tcaggctccc atctcctact ctcgaaggag cgtttctctg
       61 gggaactgcc aggaggctgc tttcttttcc ctttagtgat tccagcctac atcggagcca
      121 tggcaccaaa agcacagaag agccccaagg gtcagagaaa gggcaaaaag aagacgaagc
      181 aacagtcgct tgtttcagaa gaagaggagc caatgaacat ggagagcatg ggccatccgg
      241 agatttaccc gttagtatta actgccaaga cccaggaaat attcaactgt cgaatagatg
      301 aagatatgac agatgagcaa acatataaac tcatcaaaaa agaagatatc ttggcagact
      361 tgcaaaaccg agccgcagta tctgacttcc acccagtcaa aaaaattgtc ctggagtacc
      421 cgggggagga gctcctcctc gtatatgaca aagatttcaa atatggactt aacttttacc
      481 tcattggaac agaggaaggc aaggaaaact ttctaaaggc accagaaata ccagaggaac
      541 aagaagatct caaggagcat gttccagaag acgtgtatat ctacaagcca ccagtctcca
      601 agccgtggat atctttgggc agtgagaaag aaattgagga ggagtccgtc caagaatcga
      661 aaaagcgggt gacctacatg atttctagga aacggagtca atttggtgca cccgtgactt
      721 tcagggacca gaatgcttct agcgtaaaag atgcctacat tgagtgtacg tcttacccag
      781 ataaaagtta caccctcacg caagttgaga aagacattgg cttgcaagtc atcgctgaag
      841 tcaaggacac aagcacacag accagatggg catttccaag aaatgctacg acacagtatt
      901 atccaagaga attctcagaa gaggagaaaa acgttctcgt agaatcaaaa tccttagctg
      961 agtttttcag cactgtgtcc accagtgtcg aaatagccct gcagcaaaac gagatcatga
     1021 acacatttac tgatgactgg aggagcctcg cagaggagga gagtaccttt ggggacaaga
     1081 ctgacaccca tctgaaggag taccagtcct tcacagacct ccacaacacc atggagaaaa
     1141 tgattacctg cgtctcttgg caccccacca tctacgggct catagtcgtg tcggtggccg
     1201 tacgcctctc ctacgaagaa agggtccaga attccagtag gctactgctt cagccatcac
     1261 tgattctctt ctggagtttc tctgacccca tacaccctca gttgatgctg gagagccctg
     1321 atgacatctt ctgcttcgag ttctgtccaa gtgaccccaa tatcatcgct ggaggctgca
     1381 tcaatggaca gatcatcctg tgggatatca cggcacacgc ggaacgcata gagaacatca
     1441 agacgggcgg tagcagaagt aaaaaggcca ctctcaagcc aatgtttctc cttgaaccag
     1501 acagcaataa agaaataatg tatgtcagac actgtgcagt gtcttccatt gaaaacggcc
     1561 ataggaaagt aatcacagat atacactggc tgccggactc atttgagatc aacaggatgg
     1621 gatccgtctt tgagaaccga agtggaataa actgtcagct catcacgtgc tcagcagact
     1681 gcacaatttg tttttgggat attcgacccc aaaaacctac agtcacatct gcagccacag
     1741 ccacaaccac aagcaccacc aatacaaacc cccaacaacc accggcagag aagaagaaag
     1801 aagaaagcat tgaaattccc tttgatgtgc cctcgacttt cttgcaccta gatctctcct
     1861 ggaaacccct gagtagaata aaactgtcca agggtgaaac aagtttagac cactgtccaa
     1921 ccaagctgag cctgggcgaa gaccctgctc tttgcaaaat acaaggtaca tcttccatcc
     1981 atgttcttct gagagacaag atgctaagtc agatgaaatt gctgaaggca gcagaaataa
     2041 acccctacca aaacctggaa ggtgggatgg ccaacatgct caagccgatt gaggacttcc
     2101 gcacgaagtt ctttgtggga acggaggaag gtgaggtgat ctacacagac tggaaaatgg
     2161 agagggattc tgaaactggg cgacttatgg ccaagaaacc tgtgaacctc tacaccgtcc
     2221 atgatggggc tgtccacact gtccagaggt cacctttctt caatgacatc atcctcactg
     2281 ttgggggatg gaacgtggcc atctggaagg aggaggtcct gaccggaccg ctccttcaaa
     2341 cgtgctgcgc accgaaaagg tacaccgcag ggcactggtc cctgacaagg cctggagtat
     2401 tctacatcgg tcgagaggat ggatatgtcg atatctggga cctcctggag aaaacacatg
     2461 aaccagccca gtcgcagagt atctgcatca ccatgatcac ctacatcaaa ccctggacct
     2521 tctcttctaa gcagcagttt atagccatag cagactacta tggaaccctg catatcttag
     2581 agatcccttg gacactaagt cacccttcca ctaacgaggt atcaagtgtg aactactact
     2641 ttgaaagaga agtcaagcat ctggaatacg tccagcagcg caaggaaatc cgtgaggaag
     2701 aaaagaaagc tatggccatg gaaatgataa agaagaaagc gaaaacctat cataggtcca
     2761 aagaacaaat ggaggctgag ctgaagttgg aatatgaaag ctatttggaa cttgagcagt
     2821 ctgtcctctt cgccctcggt ctaggcaagg tctcagagaa gatgtcatac ttggacttgc
     2881 attagcagag attctcgaag atggttgctg ggagacccca gtggtcttcc ccctcccttt
     2941 attgtttgtg tgaaggtaaa atagcaaact gatcatatat aggtttattt gtaaatacag
     3001 gcttttattt aactggtatt aaaagaatca aattttatca aatataaaaa aaaaaaaaaa
     3061 aaaaaaaaaa aaaaaaaaaa aaaa
//
