LOCUS       XM_039100411            3682 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus cyclin D binding myb like
            transcription factor 1 (Dmtf1l), mRNA.
ACCESSION   XM_039100411
VERSION     XM_039100411.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100411.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3682
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3682
                     /gene="Dmtf1l"
                     /note="cyclin D binding myb like transcription factor 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     3 samples with support for all annotated introns"
                     /db_xref="GeneID:501612"
                     /db_xref="RGD:1559460"
     CDS             675..2099
                     /gene="Dmtf1l"
                     /codon_start=1
                     /product="cyclin-D-binding Myb-like transcription factor
                     1"
                     /protein_id="XP_038956339.1"
                     /db_xref="GeneID:501612"
                     /db_xref="RGD:1559460"
                     /translation="MSIFEEVSDSETVQIVSSVFVTENSDKNLMPCQQNEADEMENSI
                     EPLNKRPCLSSEVDSTPCMSAFSFPLPEMEQSFGLVTTTATKIADEEFTKENRMQLQV
                     LQDDKPDKVSPLLMKEESIVSQVWVTGKDAKDALTNQGHKWRQGMWSKEETDILMSNI
                     EKYMNERGVKNPAEIIFKMSKGKRKDFYRSISFGLNRPLFSVYRRVVRMYDDRNHVGK
                     YSPEEIEKLNVLWQKHGNDWITIGAAMGRSPSSVRDRCRLMKDTFNAGKWTKEEEQIL
                     GDAVHELTGTEVDKKVTQGVCWATVAQRVGTRSAKQCRAKWLNYLNWKQTGGVEWTRK
                     DEVNLIHRLEKLDVADESEIRWDELANGWESVRSPQWLRSKWWNIKRQITNHKDFAFS
                     VLVKCLQQVYESQNASFMFWENKSGSEESDSNPDISAQQVPFGVTGIEDNKSICPAPV
                     TGLQITLQLVPRSSTESPAGGVDS"
ORIGIN      
        1 gatattttct agttcaatct atttgcctat gtcctagcca ctgtggtcct ggtatgcaga
       61 agaaatggcc atcctgattg gctactgcac tgtgacctca ggattctgtt gtcatggtaa
      121 tattcatgtt gtctctgtaa ggcctagctt aagctgatct aatactttat cctttccaag
      181 atacatgtta tttagacatc cacagcattt tattagaaat caacattcct gtgacaagtt
      241 tgcaggatat tatacttttg agtgataaca tctctcaaaa tttaagtttg aactgcaact
      301 ctttctggga acaggaaatc agtataattt tagactactc tgcactatta tgcatattga
      361 cataaatcaa cagttctctg aagttctcat gtttaatgat tttggagcct cttgatctag
      421 ctctgtgcac tcacatttat catcaaagag aaattttcaa ctagaccaaa agaaaacata
      481 aagtaaaatg tattaaccct ctttaagggc aactgttcct aacagcttgt catacacacc
      541 agctgtagca aaccttgcac tcacaagtat caaacagaaa attgttgaag ataatatcag
      601 tttatattat ccagttaaag tgacaatttt atggaaacta ctatagctta cctagcctgt
      661 aactagattt gaagatgagt atatttgaag aggtttctga ctcagaaaca gttcaaattg
      721 tgagctctgt atttgttact gagaattcag acaagaacct catgccttgc cagcagaatg
      781 aagctgatga aatggaaaat tctattgaac ctctgaataa gaggccttgt ttgtcctctg
      841 aagttgattc tactccttgc atgtcagctt tttcattccc attaccagaa atggaacaaa
      901 gctttggttt ggtcacaacc acagccacaa agatagctga tgaagagttt actaaggaaa
      961 ataggatgca acttcaggtt ttacaagatg acaaaccaga taaagtttct cccttattga
     1021 tgaaggaaga gtcaatagtt agccaagtat gggtcacagg taaggacgct aaggatgctc
     1081 taactaatca aggacataaa tggaggcagg gaatgtggtc caaggaagaa acagatattc
     1141 tgatgagcaa catcgaaaag tatatgaatg aacgtggagt caagaatcct gcagaaatca
     1201 tttttaagat gtcaaaaggt aaaagaaaag atttctacag gtctatatca tttggtctga
     1261 atcgaccatt gttttcagtg tatagaaggg tggtccgaat gtatgatgac agaaaccatg
     1321 tgggaaagta cagccctgag gaaatagaga agctcaacgt actctggcag aagcatggca
     1381 atgactggat aacaataggg gctgccatgg gaagaagtcc atcttcagtc agagaccggt
     1441 gtcgactgat gaaggatact ttcaatgcag gaaaatggac caaagaagaa gaacagatac
     1501 ttggagatgc ggttcatgag ttgacaggca ctgaggtgga taagaaagtc actcagggtg
     1561 tgtgttgggc aacagtggct caacgagtgg gtactcgctc agcaaagcag tgtcgtgcta
     1621 aatggctcaa ctacctgaac tggaaacaga ctggaggtgt tgagtggaca aggaaagatg
     1681 aagtcaatct cattcacagg ctagaaaagc ttgatgtagc tgatgaaagt gaaattcgct
     1741 gggatgaatt agctaatgga tgggaaagtg ttcgttcacc acaatggctg cgaagtaaat
     1801 ggtggaacat caaaagacaa attacaaatc acaaggattt tgcattctca gtcctagtaa
     1861 aatgtctcca acaagtatat gaaagtcaga atgccagctt catgttttgg gagaataaat
     1921 caggatcgga agaatcagac agtaaccctg atatcagtgc gcaacaagtc ccctttggag
     1981 tcacaggtat agaagataac aaatccatct gtccagcacc tgtgacagga ttgcaaatta
     2041 cactgcagct ggtccccagg tcctcaactg aatcacctgc tggtggtgtt gactcttaaa
     2101 tctataaacc tgcctaccca accacagtag attttgagat tcttcctttt tccatttttg
     2161 ttccattccc taaccttgca cctatttcct tcaaacaaat tcaactcatg gccttccctt
     2221 aactctgacc aatggttcca cagtaagcct ggcagctgtt gcacctgatt ctcctagccc
     2281 atcacatttc atcctttgtc cccaaagcat cctgttgaat attccagtca attacatgtg
     2341 acttgtggtt ttccaaatat catcactgaa cttttgctga aacaacattg aattttccac
     2401 atcaccagca gaattggcac tcaaagatga catcttgctt tttatcattt ttatggattt
     2461 caatgtattc gaagcataaa atttgcctga caaattttta gctaagatgg ctcttctact
     2521 ttaaattaat gatgctccta tttataaatt cagataccca aacagcagag aattaataat
     2581 ccttgttatg agtacagcca aagaagaatt tcccaacacc aatcataaga agaagaaatt
     2641 cacttagatt tattgaattc ttgtgtctct gacgatttaa tcagtcatca tagtagagca
     2701 agtgcactaa acaagtgatg gcaaaaccat acttgttatc tttcactcct gggcttgatc
     2761 aaggcagggg attttacagg cattgaatca gtgttgcctg tcagaacact aacaagtctc
     2821 attgagtcac caaagcttaa gtgtggtaat atccatcact atacatcaga cacactcctt
     2881 gatcaggtct ctgtgagggc tgattccatt tcagcaagtc ctcccattgt agtgcaatgc
     2941 tctcttattt caaacacaga tactttggag gtgattgtgt ggtagttact cttggttagt
     3001 tcattgctgg gagcaggaaa ccaatttcgg gagagaaaat aaggaactaa gtcaagaaaa
     3061 gtcactattg ttttaatgtt tttaaaagga acaagagttt ccaactaaac ccactatcag
     3121 ctaagaagtg tcctcccaca ggttacaatt atcacattga actgaaagta aatggaaaat
     3181 gtactccctg tacctgataa ctcagacatt ttaatagatg ttgtactata tcaaatacac
     3241 agaactctga gaaagaactt gtattgtacc ctccccaggc aatgtactgc ccaagtagca
     3301 attttagaga caaagtttac atttgtatct aaagaaacaa aaatatttat cactaatatt
     3361 tattgacaca attgctataa aattccacca aatgtgattg tgaacaataa ttacatcata
     3421 aatatttcat tttatagaac acaaaatgat ataaaatgtt gattggattg tgaacaatat
     3481 gggtgtgttt aagaataaaa cagctgactt acaatataac agtttaacat actttgtctg
     3541 aagttttctt tctggagaaa gggatgctta gaacaattgt gtagatttct ggcagagtaa
     3601 cttgaacatg ataatcattc acaagagcat tcaaaattct aaatcacggt gaggttgtta
     3661 tagagtttgt tgtgacagga aa
//
