LOCUS       XM_039106913            2223 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus cyclin D binding myb-like
            transcription factor 1 (Dmtf1), transcript variant X3, mRNA.
ACCESSION   XM_039106913
VERSION     XM_039106913.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086022) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2223
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..2223
                     /gene="Dmtf1"
                     /note="cyclin D binding myb-like transcription factor 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 7 ESTs, 100 long SRA reads"
                     /db_xref="GeneID:114485"
                     /db_xref="RGD:70966"
     CDS             827..2086
                     /gene="Dmtf1"
                     /codon_start=1
                     /product="cyclin-D-binding Myb-like transcription factor 1
                     isoform X3"
                     /protein_id="XP_038962841.1"
                     /db_xref="GeneID:114485"
                     /db_xref="RGD:70966"
                     /translation="MSTVEEDSDTVTVETVNSVTFTQDTDGNLILHCPQNDPDEIDSE
                     DSTEPPHKRLCLSSEDDQSIDDSTPCISVVALPLSENDQSFEVTMTATTEVADDELSE
                     GTVTQIQILQNDQLDEMSPLGTEEVSAVSQAWFTTKEDKDSLTNKGHKWKQGMWSKEE
                     IDILMNNIERYLKARGIKDATEIIFEMSKDERKDFYRTIAWGLNRPLFAVYRRVLRMY
                     DDRNHVGKYTPEEIEKLKELRIKHGNDWATIGAALGRSASSVKDRCRLMKDTCNTGKW
                     TEEEEKRLAEVVHELTSTEPGDIVTQGVSWAAVAERVGTRSEKQCRSKWLNYLNWKQS
                     GGTEWTKEDEINLILRIAELDVADENDINWDLLAEGWSSVRSPQWLRSKWWTIKRQIA
                     NHKDVSFPDGGLSESQCSFCLPISLQS"
ORIGIN      
        1 gggattgggg atgtcaggga gaacacggga agaattggga gtggatatag tcaaaatgca
       61 tttattcata taaactctta aggaatctga ttcttaaaag attggcatgg gggcagggtc
      121 cagaaaacag agatgcaatc ggtgtagaca ccagcattga actttaaatc catgaagaac
      181 tgtagtctcc taaaagcgag gtcacactca cggaggacac ctttcacaat aattatacca
      241 caggaccaga aaccaaggag cagagagaga caccctgctt tcttctgtac tcttaaggcc
      301 tcttcttccc ttcggatcct ccggaaacta aacggtgcag acacctgcta aggaaaagac
      361 tctcctctat atcatccgca tcagctaggc agggactata cgaccgtatt gcttgctgag
      421 aatggcggtc gactccgcag caacccatca gcttgtcgac gcagacggaa gtgacgttca
      481 aggtggcgcg caggtccgcc ccacgggaga ggcgggccgg agaggggggg tactgagagg
      541 gcgggggcgg ggcgcggccg tggctccgtt tccggtggct ggttgcgctc gctcacccca
      601 gctgcagcca ctctctcccg tggctgcttc ctccatcctg gtattttttg gagcctccat
      661 cctggttctt ccaaagtgcc cggacccaaa acaggaaagt gttgcagatg cacaagcatg
      721 gaggagaaac agtctggata acgtgagtga tgctgctggc caaagcacag aggcgtgatt
      781 ctatgggaag ggctgtagct aatctatctg tggtctagat ttgagtatga gcacagttga
      841 agaggattct gacacagtaa cagtagaaac tgtgaattct gtgacgttta ctcaggacac
      901 agacgggaac ctcattcttc attgccctca gaatgaccct gatgaaatag actcagaaga
      961 cagtactgaa cctccacata agaggctttg tttgtcctcc gaggatgatc agagcattga
     1021 tgactctaca ccgtgcatat cggttgtggc actcccactt tcagaaaatg atcagagctt
     1081 tgaggtgacc atgacggcaa ctacagaggt ggcagatgat gaactttctg agggaactgt
     1141 gacacaaatt cagattttac agaatgatca actagatgag atgtctccat tgggtactga
     1201 ggaagtttct gcagttagcc aagcatggtt tacaactaaa gaagacaagg attctctcac
     1261 taacaaagga cataaatgga agcaagggat gtggtccaag gaagaaattg atattttgat
     1321 gaacaacatt gagcgctatc tgaaggctcg cggaataaaa gatgctacag aaatcatctt
     1381 tgagatgtca aaagacgaaa gaaaagattt ctacaggact attgcgtggg ggctgaaccg
     1441 gcctttgttt gcagtttata gaagagtgct gcgcatgtat gatgacagga accatgtggg
     1501 aaaatacact cctgaagaaa ttgagaagct caaggagctc cggataaagc atggcaatga
     1561 ctgggcaaca ataggggcgg ccctgggaag aagcgcctct tctgtcaaag accgctgccg
     1621 gctgatgaag gacacctgca acacagggaa atggacagaa gaagaagaaa agagacttgc
     1681 agaggtagtt catgaattaa caagcacgga gccaggtgac atcgtcacac agggtgtgtc
     1741 ttgggcagct gtagcggaaa gagtgggtac ccgctcagaa aagcaatgcc gttctaaatg
     1801 gctcaactac ctgaactgga aacagagtgg gggaactgag tggaccaagg aagatgaaat
     1861 caatctcatc ctcaggatag ctgagcttga tgtagctgat gaaaatgaca taaactggga
     1921 tcttctagct gagggatgga gcagtgttcg ttcaccacag tggcttcgaa gtaaatggtg
     1981 gaccatcaaa aggcaaatcg caaaccataa ggatgtttcg tttcctgatg gtggtctgtc
     2041 ggagagtcaa tgttcttttt gtctacccat ctcccttcag tcttaataaa aggtcttaaa
     2101 cagttacatg agaaccaaaa aaacaaccca gtgcttttgg agaataaatc aggatctggc
     2161 gttccaaaca gtaattgcaa ttccagtgta cagcatgttc agatcagagt cgcccgcttg
     2221 gaa
//
