LOCUS       XM_017592381            4119 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus cyclin D binding myb-like
            transcription factor 1 (Dmtf1), transcript variant X1, mRNA.
ACCESSION   XM_017592381
VERSION     XM_017592381.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017592381.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017592381.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4119
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4119
                     /gene="Dmtf1"
                     /note="cyclin D binding myb-like transcription factor 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 mRNA, 50 ESTs, 4 long SRA reads, 14
                     Proteins, and 92% coverage of the annotated genomic
                     feature by RNAseq alignments, including 173 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:114485"
                     /db_xref="RGD:70966"
     CDS             827..3109
                     /gene="Dmtf1"
                     /codon_start=1
                     /product="cyclin-D-binding Myb-like transcription factor 1
                     isoform X1"
                     /protein_id="XP_017447870.1"
                     /db_xref="GeneID:114485"
                     /db_xref="RGD:70966"
                     /translation="MSTVEEDSDTVTVETVNSVTFTQDTDGNLILHCPQNDPDEIDSE
                     DSTEPPHKRLCLSSEDDQSIDDSTPCISVVALPLSENDQSFEVTMTATTEVADDELSE
                     GTVTQIQILQNDQLDEMSPLGTEEVSAVSQAWFTTKEDKDSLTNKGHKWKQGMWSKEE
                     IDILMNNIERYLKARGIKDATEIIFEMSKDERKDFYRTIAWGLNRPLFAVYRRVLRMY
                     DDRNHVGKYTPEEIEKLKELRIKHGNDWATIGAALGRSASSVKDRCRLMKDTCNTGKW
                     TEEEEKRLAEVVHELTSTEPGDIVTQGVSWAAVAERVGTRSEKQCRSKWLNYLNWKQS
                     GGTEWTKEDEINLILRIAELDVADENDINWDLLAEGWSSVRSPQWLRSKWWTIKRQIA
                     NHKDVSFPVLIKGLKQLHENQKNNPVLLENKSGSGVPNSNCNSSVQHVQIRVARLEDN
                     TAISPSPMAALQIPVQITHVSSTDSPAASVDSETITLNSGTLQTFEILPSFHLQPTGT
                     PGTYLLQTSSSQGLPLTLTTSPTVTLAAAAPASPEQIIVHALSPEHLLNTSDNVTVQC
                     HTPRVIIQTVATEDITSSISQAELTADSDLHSSDFPEPPDALEADTFPDEIPRPKMTI
                     QPSFNNAHVSKYSDQNSTELMNSVMVRTEEEIADTDLKQEPPSDLASAYVTEDLESPT
                     IVHQVHQTIDDETILIVPSPHGFIQASDGIDAESVLPLTTLTDPIFQHHQEESNIIGS
                     SLGSPVSEDSKDVEDLVNCH"
ORIGIN      
        1 gggattgggg atgtcaggga gaacacggga agaattggga gtggatatag tcaaaatgca
       61 tttattcata taaactctta aggaatctga ttcttaaaag attggcatgg gggcagggtc
      121 cagaaaacag agatgcaatc ggtgtagaca ccagcattga actttaaatc catgaagaac
      181 tgtagtctcc taaaagcgag gtcacactca cggaggacac ctttcacaat aattatacca
      241 caggaccaga aaccaaggag cagagagaga caccctgctt tcttctgtac tcttaaggcc
      301 tcttcttccc ttcggatcct ccggaaacta aacggtgcag acacctgcta aggaaaagac
      361 tctcctctat atcatccgca tcagctaggc agggactata cgaccgtatt gcttgctgag
      421 aatggcggtc gactccgcag caacccatca gcttgtcgac gcagacggaa gtgacgttca
      481 aggtggcgcg caggtccgcc ccacgggaga ggcgggccgg agaggggggg tactgagagg
      541 gcgggggcgg ggcgcggccg tggctccgtt tccggtggct ggttgcgctc gctcacccca
      601 gctgcagcca ctctctcccg tggctgcttc ctccatcctg gtattttttg gagcctccat
      661 cctggttctt ccaaagtgcc cggacccaaa acaggaaagt gttgcagatg cacaagcatg
      721 gaggagaaac agtctggata acgtgagtga tgctgctggc caaagcacag aggcgtgatt
      781 ctatgggaag ggctgtagct aatctatctg tggtctagat ttgagtatga gcacagttga
      841 agaggattct gacacagtaa cagtagaaac tgtgaattct gtgacgttta ctcaggacac
      901 agacgggaac ctcattcttc attgccctca gaatgaccct gatgaaatag actcagaaga
      961 cagtactgaa cctccacata agaggctttg tttgtcctcc gaggatgatc agagcattga
     1021 tgactctaca ccgtgcatat cggttgtggc actcccactt tcagaaaatg atcagagctt
     1081 tgaggtgacc atgacggcaa ctacagaggt ggcagatgat gaactttctg agggaactgt
     1141 gacacaaatt cagattttac agaatgatca actagatgag atgtctccat tgggtactga
     1201 ggaagtttct gcagttagcc aagcatggtt tacaactaaa gaagacaagg attctctcac
     1261 taacaaagga cataaatgga agcaagggat gtggtccaag gaagaaattg atattttgat
     1321 gaacaacatt gagcgctatc tgaaggctcg cggaataaaa gatgctacag aaatcatctt
     1381 tgagatgtca aaagacgaaa gaaaagattt ctacaggact attgcgtggg ggctgaaccg
     1441 gcctttgttt gcagtttata gaagagtgct gcgcatgtat gatgacagga accatgtggg
     1501 aaaatacact cctgaagaaa ttgagaagct caaggagctc cggataaagc atggcaatga
     1561 ctgggcaaca ataggggcgg ccctgggaag aagcgcctct tctgtcaaag accgctgccg
     1621 gctgatgaag gacacctgca acacagggaa atggacagaa gaagaagaaa agagacttgc
     1681 agaggtagtt catgaattaa caagcacgga gccaggtgac atcgtcacac agggtgtgtc
     1741 ttgggcagct gtagcggaaa gagtgggtac ccgctcagaa aagcaatgcc gttctaaatg
     1801 gctcaactac ctgaactgga aacagagtgg gggaactgag tggaccaagg aagatgaaat
     1861 caatctcatc ctcaggatag ctgagcttga tgtagctgat gaaaatgaca taaactggga
     1921 tcttctagct gagggatgga gcagtgttcg ttcaccacag tggcttcgaa gtaaatggtg
     1981 gaccatcaaa aggcaaatcg caaaccataa ggatgtttcg tttcctgtct taataaaagg
     2041 tcttaaacag ttacatgaga accaaaaaaa caacccagtg cttttggaga ataaatcagg
     2101 atctggcgtt ccaaacagta attgcaattc cagtgtacag catgttcaga tcagagtcgc
     2161 ccgcttggaa gataatacag ccatctctcc aagccccatg gcagcgttgc agattcccgt
     2221 ccagatcacc cacgtctctt caacagactc ccctgctgct tctgttgact cagaaacaat
     2281 aacactaaac agtggaacac tgcaaacatt tgagattctt ccatctttcc atttacagcc
     2341 tactggtact ccaggcacct accttcttca aacaagctca agtcaaggcc ttcccctaac
     2401 actgaccaca agtcccacag taaccctggc agctgctgct cctgcttctc ctgaacagat
     2461 cattgttcat gctttatccc cggaacattt gttgaacaca agtgacaatg tcacagtaca
     2521 gtgtcacaca ccaagagtca tcattcaaac tgttgctaca gaggacatca cttcttcaat
     2581 atcccaagca gaactgacag ctgatagtga tcttcattca tctgattttc ctgagcctcc
     2641 agatgcacta gaagcagaca ctttcccaga tgaaattcct cggcctaaga tgactataca
     2701 accatcattt aataatgctc atgtgtctaa atacagtgac caaaatagca cagaactgat
     2761 gaatagtgtc atggtcagaa cagaggaaga aattgctgac actgacctta agcaagaacc
     2821 accttccgac ttagccagtg cttatgttac tgaggattta gagtctccta ccatagtaca
     2881 ccaagttcat cagacaattg atgatgagac aatacttatc gttccttcac cacatggctt
     2941 tatccaggca tctgatggta tcgacgctga gtctgtcttg cctttgacaa cactaacaga
     3001 tcccatattt caacatcatc aggaagaatc gaatataatt ggatcatctt tgggcagtcc
     3061 tgtttctgag gactcaaagg atgttgagga cttggtaaac tgtcactaga ttgttagaag
     3121 caggtacttc aggaagccac attgttgact acagactaca ttgtctccaa agaaaggagc
     3181 catcccaaga gtcttggtct gccattcctc tggcctgtgc atagctgctg tgcttaagcc
     3241 atgcacatcg ttgctgctgt taccttttac ctccttttaa gtagatcatc tgaggtccaa
     3301 ttttataagt gtgttatgat ggaggacagg aagtgtgagc tgcccagact tgttaagttt
     3361 tgtgtcaaga gggagttgca gtcagtgcag ctacttctgt caccaaagct taactcctct
     3421 ggtttacatc taaacagtaa tacccatctc tgcggtggac actgagctct gcccagactc
     3481 aggctggtct gcttacaatt caggttatat tagcaacaag gtccagctca ccttagcagt
     3541 gactttcaga aagactaact taggagttta tgacatgacc aggtccaaga tcatgggagg
     3601 tggctgtgat ggttaaccca ttgctggcag tgggagctga ctgaggcagg gtaaaggacg
     3661 aagcagagag tcaagaaaat tcactacagg tctttggttt ttaactttta aagggaatgt
     3721 gggtaaagtg gtaacacaat gcactggtaa ccaagcagtt atcaccctca tcagaaacca
     3781 gtccttagtt tacagttagc actttgaagt gagattaaat gaggggaggt aatattgcct
     3841 gtatttgata accatgactt ttttttatta cacgttttac tatataaatt gcccagaaga
     3901 tagttgaggg gtattagagt atgctgttca cttagtgcat tacctggtgg gggtacagta
     3961 tagcttctcc ctcaggcact tttaaaaaac aaagtttgct tctgtatcaa aagaaaacaa
     4021 atcaagagtc attcctaagg taaagccaaa agtagcctct agggctttaa tgatatgatc
     4081 cttatagaaa agtaaaaaaa aaaaaaaaaa aaaaaaaaa
//
