LOCUS       NM_001109140            1607 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus DMRT-like family C2 (Dmrtc2), mRNA.
ACCESSION   NM_001109140 XM_001059574 XM_001068636
VERSION     NM_001109140.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1607)
  AUTHORS   Murphy,M.W., Zarkower,D. and Bardwell,V.J.
  TITLE     Vertebrate DM domain proteins bind similar DNA sequences and can
            heterodimerize on DNA
  JOURNAL   BMC Mol Biol 8, 58 (2007)
   PUBMED   17605809
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1607)
  AUTHORS   Kim,S., Namekawa,S.H., Niswander,L.M., Ward,J.O., Lee,J.T.,
            Bardwell,V.J. and Zarkower,D.
  TITLE     A mammal-specific Doublesex homolog associates with male sex
            chromatin and is required for male meiosis
  JOURNAL   PLoS Genet 3 (4), e62 (2007)
   PUBMED   17447844
REFERENCE   3  (bases 1 to 1607)
  AUTHORS   Kawamata,M. and Nishimori,K.
  TITLE     Mice deficient in Dmrt7 show infertility with spermatogenic arrest
            at pachytene stage
  JOURNAL   FEBS Lett 580 (27), 6442-6446 (2006)
   PUBMED   17098235
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473979.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001059574.1, XM_001068636.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..1607
                     /gene="Dmrtc2"
                     /note="DMRT-like family C2"
                     /db_xref="GeneID:499100"
                     /db_xref="RGD:1583739"
     exon            1..109
                     /gene="Dmrtc2"
                     /inference="alignment:Splign:2.1.0"
     exon            110..337
                     /gene="Dmrtc2"
                     /inference="alignment:Splign:2.1.0"
     CDS             114..1226
                     /gene="Dmrtc2"
                     /note="doublesex and mab-3 related transcription factor
                     like family C2; doublesex- and mab-3-related transcription
                     factor C2-like"
                     /codon_start=1
                     /product="doublesex- and mab-3-related transcription
                     factor C2"
                     /protein_id="NP_001102610.1"
                     /db_xref="GeneID:499100"
                     /db_xref="RGD:1583739"
                     /translation="MDPSETPALHHCSADSSPADEARVPQSTELIPRRPVSRSPTCAR
                     CRNHGVTAHLKGHKRLCLFQACECHKCVLILERRRVMAAQVALRRQQEAQLKRHLAQG
                     LMKGAAPLKAPLRVKKGGIRPGVPSGKENIAPQPQNPHGAVPLVLTPPGKENYGPLLL
                     SRPPEALPLPWTPVPPGPWGPGHWLPPGLSMPPPVVCRLLCQEPAVPLHPFPGFDPGT
                     SLRLPTHGALPTCPGSRSVLTAPLSGEPQGPPNLPHTCSTLILQSCGTPDSLLLQPQA
                     PGASCLAWTSGPSERQLQREAAEALVGLKDSSQAPRLTPSVPPNPAWISLLHPCGPPA
                     PPGGRGFQPVGPPLRPSPGSSVSLHIGRLGSISLLS"
     exon            338..492
                     /gene="Dmrtc2"
                     /inference="alignment:Splign:2.1.0"
     exon            493..569
                     /gene="Dmrtc2"
                     /inference="alignment:Splign:2.1.0"
     exon            570..750
                     /gene="Dmrtc2"
                     /inference="alignment:Splign:2.1.0"
     exon            751..877
                     /gene="Dmrtc2"
                     /inference="alignment:Splign:2.1.0"
     exon            878..938
                     /gene="Dmrtc2"
                     /inference="alignment:Splign:2.1.0"
     exon            939..1113
                     /gene="Dmrtc2"
                     /inference="alignment:Splign:2.1.0"
     exon            1114..1607
                     /gene="Dmrtc2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgtgaagga gcgggaaaag ccgctcgagc tggccgttcc tcttcgccac tttgtcgccc
       61 ttgtcttcgg gccgtctcct ggctgactgt gattcggctc gaggctgtga tccatggacc
      121 ccagtgaaac gccagctctc caccactgtt ctgctgactc ttccccagcc gatgaggcca
      181 gagtgcccca gagtacagaa cttattccca ggagaccagt cagtcgctct cccacctgcg
      241 cccgctgtcg gaaccatggg gtcacagccc acctcaaggg ccacaagcgc ctctgcctct
      301 tccaggcttg cgagtgtcac aaatgtgtcc tcatcctgga acgtcggagg gtcatggctg
      361 cccaagtggc cttgcgcagg cagcaggagg cacagctgaa aaggcacctg gctcagggac
      421 tgatgaaagg ggcagcccct ctgaaagccc cactccgtgt caagaaggga ggcattcggc
      481 caggggtccc ttctggaaag gagaacatag caccccagcc tcagaatccc catggagcag
      541 tcccgctggt actgacaccc ccagggaagg agaactatgg gcccctgctg ctcagccgcc
      601 ccccagaagc cttgccttta ccctggactc cagtgcctcc tgggccttgg ggccctggac
      661 actggttgcc cccgggcctc tcaatgccac ctccagtggt gtgccgcttg ctgtgccaag
      721 aacctgctgt ccctctacat cctttccctg gctttgaccc tggcacctct ctccggctgc
      781 ccactcatgg ggccctcccg acctgcccag gatctcgctc agtactgacg gctccacttt
      841 ccggagagcc ccaaggaccc cctaacctgc ctcacacgtg ctcaactctg atactccagt
      901 cctgtggcac cccagactct cttctgctac aaccgcaggc ccctggagcc tcctgcctgg
      961 cctggacatc tggcccctcg gagcggcagc tgcagcggga ggcagctgag gcccttgtag
     1021 gtctgaaaga ttcttcccag gccccacgcc tgaccccatc tgtcccccct aaccctgcct
     1081 ggatctctct gctccacccc tgtggcccac cagctcctcc tgggggaaga ggattccagc
     1141 ctgttggccc acctctccgg cccagtccag gttcctctgt ctctctgcat attgggcgtc
     1201 tgggatccat ctctctcctc agctagaaag cagaggtgga ggctacctca ctgggacaaa
     1261 gagacgacaa actgcaggca ctacatattt ggtattttat ttatgagttt tgcatgggat
     1321 tcaatgtaat gcaagcttca gccttctttt ttaataagct tttaggttcc ttttgtaggg
     1381 tgggtatttc cttggctgaa ggtggatatt ctcatagccc gtttgaatgc taagtccccc
     1441 ataaaggcag ttgggcagtt taagatgatc catacctaaa tatatttttt cgtgagttta
     1501 tgctctcttt atgcctgtgt tcttatgtct gtctctgaat gtgaaaatac aagaatatgt
     1561 tcactttgta tgtaggtttc tgtaagcaag aaataaacct ttgccat
//
