LOCUS       XM_039100204            8973 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus DMRT-like family C1b (Dmrtc1b),
            transcript variant X1, mRNA.
ACCESSION   XM_039100204
VERSION     XM_039100204.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8973
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..8973
                     /gene="Dmrtc1b"
                     /note="DMRT-like family C1b; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 34 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:680068"
                     /db_xref="RGD:1596820"
     CDS             7424..8344
                     /gene="Dmrtc1b"
                     /codon_start=1
                     /product="doublesex- and mab-3-related transcription
                     factor C1-like isoform X1"
                     /protein_id="XP_038956132.1"
                     /db_xref="GeneID:680068"
                     /db_xref="RGD:1596820"
                     /translation="MFPVMSEISSNYQNITYGKKKAIWGQPRLYWMLWEKRVKGRMSA
                     FKPSVVVRVPERRVQILSAQRNNWIHYREQHGLLPAGSAPKKEQGTRLKRSLDQGVIQ
                     NMAVPPKFHKHAKRLAVEAEKRNGKESSVRKHEARPHKTPREGSSHGTLMSNKPREHA
                     ILSYTPVTWQQQSVISFPAEQHHSFVRPKRYSSVIVQNRAISGPLLLQPQVPNVNKQD
                     SVAAALEWQRKLEAAEALLALRDTPLPPPNFASLQPLGNMPNSYLPEHGPQGSDGEKG
                     LQPRSRHLPRSRAANSVSLTGSLECMSFFT"
ORIGIN      
        1 ggccagctgt gtcccagagg aggtgtcctg ggaggtgtgg agggtgtgga ggtatgctcg
       61 ccccaaagca tcccgtcctt ggggagccgt cacaaaacgc accaccagag cttgtgtgca
      121 gcacaagcat ctggtgcaca gagggtaggt gtccaacagc gctcccttgc tctcggtatt
      181 cttgtgggga tttcaaagga aacaagacag atggaagtcc tggagtttgt ggcccaagtg
      241 aatgacatcc ggcccagagc cttgctgtgg cagtaaatga ggcattgcaa gaagaggaga
      301 aagtgcccgg tgctgagcgg tggcccagaa gcagctgctg gtgatgatgt gaccagtgca
      361 agtgttagtg cgagttccgg tcccagggcc tgtaccacgg ctgaagcaag tgtcagcgcc
      421 agtgccaatg caagtgccag ggccagggct agagccatgt aggagtaacg atggtcagta
      481 ccggggacag tgccggtgcc agtcacaatc tcaggccaga gtcagggctt ctgctgccac
      541 cagggatggc tgatgctgag gcttccttgc tttggttttg atagtccaag gggtgcagga
      601 gcagcgggcc ctgaggccct gatgtggaaa gagtgcaggg gcagagtgga ggcaggaagc
      661 attcacagta ttgtgctcca tccagttctc tgtgcttcgc ggtgacttgg cgctcaatcc
      721 ccacggcaag gtcgtgcttg ctttgtagct accccctttc cggttgatga acggttgtga
      781 gggaatcaag cgatggaggc tgaggaggtg gttgagtggt gcaagtcttt cctcacgtgg
      841 ggaaggctat gggctccatc ccaggaacca taaagcaaaa ccaatcaaag gggactccct
      901 ttgaactgtg tcagatcagc gtggaagtca aggcatacta aaatctttcc caaaccctct
      961 cttttctaag gcgtgtgatt aagtaggagc atctacgttc atgcttggca tgcatccagt
     1021 gtttccttgt tccttattta ggagaggttt attcatttac acaaaacaca tgtgacacac
     1081 tgtcacttta tatctcaaat acacgacata agcgtcagtg gttagttttt tgtttttttt
     1141 tttttttttt tttttggagg ttttgaagga atttccaaca cactgatccc ctgctcgaga
     1201 tattaagagg caaaacacaa atgtggccaa aatctgacac acaacaaaac caggtgacat
     1261 ttacttgcat gaacccagag ctttggaatg taggggaaat aaacttgact tagacacctt
     1321 gctcatggac tcatttattt aacatacatc tagtgactgg ttaccatacg tgaggcactg
     1381 ttcagggcac tggaagtctg aggatacacc agattcagcc tctgccacac ccctgagagt
     1441 ctggttgagg ctctccatgt aaataagtta ggtagatgtg gcattcagat gtgatggggt
     1501 gatggtgtga accaggtggt cagggagccc agaggagagg catggcaacc tgggagggga
     1561 gcagcaggga gcagcaggct ttattgaagt cagggaacag cacctgagac ctacagcact
     1621 agagacggtt aaactgccaa agacccctgt aggatattgt ggatacctgg aagacatctt
     1681 gcttccgtgg acctggcaag atactggact taggctgtga gagtgagaac ttgtgtgcag
     1741 aagacacaca ctttagttgt gctgtgagag gagagagggc gtgagaagta cccgggagta
     1801 gacactcttg gctctgaggt gagtctgagg gaaggcccac ctccagcagc tgtggtgtct
     1861 gctctggatt ctggcacccg tgcagctagt gcattacaca ctctgcatcc tttcatccat
     1921 catttctaag gagtagcagg atggtagtaa ctgtctattc actgtacagc gattgtcccc
     1981 tgaatcatgg gcacaaaaca gaggttgtct cccaaggctt gggagagaca gagctcagtg
     2041 ctttatgagg gtattggtaa gattccaggg aagtttcatg aatgaaaaaa gaaagacaaa
     2101 gctgtgtgaa cagcagtaaa ggattctgat ggtgtgtgga gtgttgtctc actgtggaca
     2161 gaagtgagag acaagtgtgt cttagcctgg atcagagcca gtgagtgcct tgatggccca
     2221 gctgaggacc agtccagtgt aacatagcta cacaagttgt gtgcgtggat agggtcctga
     2281 tggaaatata ggcctgcatg acatggattt gaaggagcca atatccggtg ataagttaga
     2341 ccagcttcca gtgggtatca ggagcagagt agctggcctt tcagctgacc tttcactctt
     2401 acagactgct gggcacattt aacttgtgtg cttctgtgcc ttggaaagct ccccgcctct
     2461 agacagaacc gtgaacagat ctggtcaccg cactcttggg gcctcccctc agatatatat
     2521 atatatagtc cagagagcat tgtatctaaa ttgctcaatt cgttcaatac tgtgtagaca
     2581 tcaaggagaa gtgtctgctg gtggggtgag agtgaccata acactagaat ctgaggcgga
     2641 ctgtagtggg gattgtggga atgatctctg actttctctg gagttgggct cttggggatg
     2701 aatatgtgga catcagtcta agccctttcc ttggtgtgcc agacatcccc aggtgtctat
     2761 cagcaggtaa ccccttgcca atagtgaaca ctgaataata aatgccatat atggtagttc
     2821 tttttcctcc agaataccca tggagataga ctgtctacag cacacaatcc taaagtacta
     2881 ataggtacct tagcgagctc ttctgcccca ttgaaagcac taaggatgtt atctgtccac
     2941 ctgttactta cctgcaccat cgaatgatct ctgtctcgaa atgccaagtc catcccacct
     3001 gtctggtttt gtttgggggg cggggtgatg attgtgcagg aacactactg ttacagaaca
     3061 taccagatgt aggaaaacat atttccacct agatgggata aaagcaatag aaagcagatg
     3121 gctcctcttt ttgttgttgt ccctaagaag aggagacaat atttccacca tttctagaag
     3181 gatgagacaa cactctgggt agcactgtgt gatacaagcc cccatttaca cagaaaagag
     3241 agcaatgtat tttgagagtc ccaagaattc caattccccg tagttctaaa gtccagtgtg
     3301 ttaatgtccc gctctctgct acctggtgtt gcagtttctc tattttccat tatgattttt
     3361 attttctctc tatggctgta tagcacacat ctgtgactgg gtgtgtgtcc agtgcccaca
     3421 gaggtcaaaa gggtggtgag acaggtgtct gggtactgga accatgctcc attgtgagtc
     3481 atagtgtgag ccaggtcctc tctaccactg agccatctgt ccacctcaag cggttgcgat
     3541 ttgtaacatg ttctcctcca catgaaatta agggttcagt tgtgttctat cctcccttgg
     3601 agccttgtgc tgaggaaact gtgttacact gaaattcaag gtcaccaagg agaagaaaga
     3661 aatgctcaca caggcagaaa aaccatgtgt agttggcaca aaggttttct ctggcaggct
     3721 gtctctcttg aggtgtaatg tgtggactgg gaaatgtttg tgaagagaga aggctagaac
     3781 aggaaccaga gagtctttct aaaagggcca ccgaccccct gttcatgaac ccttctcctt
     3841 gtaatactcc tgcctctacc cctccatgac caattgatga ataaggccca ggattactcc
     3901 atatgagggt atttttgcaa tgaaaggggg caaagacaca agcgattcca tccttggttt
     3961 tttgggaaca tgcaggtgcc ccttggggat cacaggtgga tctgtgggaa atttcctgtt
     4021 gactggtctc tgtgccttga acagtgatgc taccattact gtgaaagcag cagtggttca
     4081 agagtgtgag tgaggggctg gggatttagc tcagtggtag agcgcttacg taggaagagc
     4141 aaggccctga gttcggaacc cagctccgaa aaaaagaacc aaaaaaaaaa aaaaaaaaag
     4201 agtgtgagtg agtggccttt cagaacaaat aaagacacta gttcctgcca tttacactcc
     4261 tgatgccctt agcgtcacaa atctgacagc tcagtcattg catccgaggc gagtatcagt
     4321 gtgaaaagtg aagaaatttc acaaagccaa agaacattta tgccagcatt tatttcgaca
     4381 tcacgggaca ggattctttg gagagcaggg acctgaggtg ccgaaggtct tgatcactgt
     4441 gcatgggtcc ctgtctagga ctcccattgt cccagcctcc ggttgatccg cgtcctctcc
     4501 tgcggcggaa acagacaaga caggtggacc cttattaggc ctgctggaac tgagaagagg
     4561 actcaggttc tgtgtagggg agagcatggg agacagcctg gcaagctgca agtggagaga
     4621 gaggcaaggg ctggctgggg tcctcacctg aagaacttgg acacgcgtgg caaggctctc
     4681 tgaaagcagc ccctccaggt ccttcgcaga ggagcaggct ccctggtctc tcttgggctg
     4741 ttggatgagt tctccatggt gtgagcatag accacaccat cctgggagaa gtgcgttggg
     4801 tttctcctaa tctgaaagag agagttgaag ccgcactcat tcccatcatg gctgctgtgc
     4861 acaaccacat tcgcctacag tgctgtgcat tcatacagct gttggagatg tggaggaagg
     4921 agaagagggg ctacctgtcc tgttcatacc tcagcctccc aggaaggtct tccagcccac
     4981 atactatgag attaccgacc caggatgcgg aaagaagggg acaaaaatca tccttcccag
     5041 agtgtctgtt ctgtctggag gaactcctag gactcccttg cagtgatcag tggagctgat
     5101 ttctgttctc aatttctctg attgagtata aatgctatgc acgccccttc acagtgcctg
     5161 cccagtctgc ccagtctgcc cagtctgccc agtctgcgca tgcccactcg gcctgtgtct
     5221 aggcctgctc attctgcccc gtctcttcct acccaccgtg ccccttcaca gggcctgccc
     5281 actttgctcc tccccttgcc tgcccacagt gctccttcct gtgactgccc actcttccct
     5341 tgcccatgat tcctcccggc ttcagtctgg tacattcagc cccaccagtg gatacaattt
     5401 tgataagtga cctcttctat tttcctgtgt ctctcacttc aaggttactt cctcccctcc
     5461 cttccattgt atctttatct cctccgtgtc cctccctccc tcctcttcca acttcacttt
     5521 gattttcaca ccctctgtct cgatctctgc ccgtcatctc cactggaccc cggaagcctc
     5581 aagactagtt ctcttcctga gcagagagac actcagtggt cccactgtga gaagaaagct
     5641 tgcttaaatt ttagccatac ctcatttggg gggacagtat ttgatcctgt gccctcagca
     5701 gactctcctg atcccagtgt gcacctacct gtcaggtttc ttgtctttgg ttctttcaaa
     5761 agttccggtc tagtgtcact taagcaggga cattttatac tgtgtttcaa gcagtcagtg
     5821 ccatcataga gctcccgaca tagatctctg cgctgggttt cacacactga gctgtgaaat
     5881 cctgtaggtg aagtcatgag ggatcatttg gatgaagctg tgccattttg aagtgcctct
     5941 gtagcttcac aatgcggagg aaaatggagg gtggcatctt tggcctttga ctacatgtgc
     6001 tgtgtgaagc tatttgtggc tatccgccat cgcttgtctt cgatggtccc catgggcatc
     6061 actacagagt tgtaggtgga cctggagtgg gagggagatt gggggaagag ttggagtgat
     6121 gcttgttgtg gggctgtcac tgaagaggaa gtttgccaga caaactcttt cattccagac
     6181 aggctatctg tagtccctga ggtgctgatc cgaaatcgcc aggtacattt tgcccaatgc
     6241 tcagaactgt cctggcctcc cttctgaggt gaatatgttt ccttgtcctc gctgtgtccc
     6301 tttccagtcc atgtacccaa ctcccacaag gtccctatgc taaccaggag aaaggtccac
     6361 cttttggtcc agcaaccata atagaactcc tggttccctg gccagcactt gttgccatgc
     6421 tgagctacca ccagggggca gaacaagatg ggagagctgt cggagacaga acccctgagc
     6481 tctctatgat gcagcttctg gaccaggttt cccaggagcc caaatcagtc ataagctaac
     6541 tgcccttgcc aagattttgt cctgtaagtt gtttgaagac aggccctgct tgagaggccc
     6601 tgacatctgc agtgacgatg gaggactggc tcccgtgggt aggcctactg gtccattccc
     6661 ttaccagcat ggcagtgtgg aagttggctg cttaaacagg atgagggaag tggtatgtgt
     6721 cactgtctca aggtaatgta accatgtcag tcatctgaca gcagggaatc agaaacagca
     6781 gaaggtcagt gtcagcaaca ggatcttctc agtctgcctt ggactgaatc atgtctcctc
     6841 acaatttatg ttgctgtttt tgacacctaa acccagagat tattgggttt ggaaccttaa
     6901 gtgtggaatt aagatggatc ttagccataa gtgggaggct gacgtacagg gattaatgtc
     6961 atcatgtgaa gaaacagcag acaacttgct ctgtgtatgc acaaatgcta gaaggagatg
     7021 ctgtgtgagg gctcagtgag aagcaggcta agctgggatg ctaggcagaa gccaagcctg
     7081 gacacacttt gatcttgtac ttgccagtct gcagaaccat caggaaataa atctgttgtt
     7141 ctaatcatct tgtcttcggt attaatttta tggaagtcca cagagtggac cagtgtgccc
     7201 atccttgcga ttctctgaag aatgaacccg gggttcctat ggataagtca caggtagctt
     7261 gctcattggg acactgaaac tgggtgtgaa gcatgggtgt ttgccccttt ggaattttgt
     7321 gaagaacaaa agttacctac actcacctat tatgatgggt ccccgagatc ttcaggatgt
     7381 gggagagggt gtggcatgat agattctccc actgtgagtt tgaatgtttc ctgtaatgtc
     7441 tgaaatttca tcgaattatc aaaatattac atatggaaaa aagaaagcca tttgggggca
     7501 gcctaggctt tactggatgc tgtgggagaa aagggttaag ggaagaatga gtgcattcaa
     7561 gccttctgtt gtagtgcgtg ttccagagag gagagtccag atcctgtcag cccagagaaa
     7621 caactggata cattacaggg aacagcatgg gctcttgcct gctgggagtg ccccaaagaa
     7681 ggagcagggt acacgactga agaggtccct ggatcaagga gtgatacaga atatggccgt
     7741 tccacctaaa tttcacaagc atgccaagag gttggctgtt gaagcagaaa aacgcaatgg
     7801 gaaggagagc agtgtgcgca agcatgaggc caggccccac aaaaccccac gggagggaag
     7861 ttctcatggc actctgatga gcaacaagcc acgcgaacat gccattctgt cctatactcc
     7921 agtgacttgg cagcagcaat ctgtgatttc ttttcctgct gagcagcacc attcctttgt
     7981 caggcccaaa agatactcaa gtgtgatcgt gcaaaaccgt gccatctctg ggcctcttct
     8041 actgcagcca caggtcccta atgtcaacaa gcaggattct gttgctgctg ccttagagtg
     8101 gcagaggaag ctggaggctg ctgaggctct gttggctctg agggacactc ctctgcctcc
     8161 tcctaacttt gcctctctac aaccgcttgg caacatgcca aatagctatc ttcctgaaca
     8221 tggaccacaa ggttctgatg gagagaaggg gctgcagcct cgtagccgcc acctaccacg
     8281 ctcaagggct gccaactccg tctctcttac tggaagtctg gagtgcatgt ccttcttcac
     8341 ctaagagacc agagggggag gtctcactac agcactgcct atttagtatc ttgtttcatc
     8401 taaaggaaca agtgttttta aatattttta ttttttgcaa tgagatctca cacagcgagc
     8461 ctggacttgg attcagtaca cagctgacga tgattttgaa ctcctgattt ttttctccac
     8521 ctcccaagtg ctcagattat aggcatgttt taccatgcct ggctttctaa aaattatcat
     8581 taagttttca ggagttttgt aagcttccag acccttttat ggtatagggc atttacttga
     8641 gtaaggtttg aggttgcaca tctctctctc tctctctctc tctctctctc tctctctctc
     8701 tctctctctc tctctctctc tctctctctg ttattccttt ggaataattg cattctgtgg
     8761 ctcgtagaga aaaaaaaaca gtattgtgtg ctctaatgtg accaatcact gggattccga
     8821 gtgggctcgg atgccagcat tttcatttgt cctgtgattg ttcactcgct ggcacaccat
     8881 gtaatcattc atgtggaatc acgaagactt tccaatgtgt ccaggcatgt gtagaggggc
     8941 aaataataaa catgtgctgt aggctctgaa caa
//
