LOCUS       NM_001025288            1159 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus DMRT-like family C1a (Dmrtc1a), mRNA.
ACCESSION   NM_001025288 XM_577064
VERSION     NM_001025288.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1159)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC097356.1.
            
            On Jul 13, 2005 this sequence version replaced XM_577064.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC097356.1, CV104135.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1159
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq22"
     gene            1..1159
                     /gene="Dmrtc1a"
                     /gene_synonym="Dmrtc1"
                     /note="DMRT-like family C1a"
                     /db_xref="GeneID:108348153"
                     /db_xref="RGD:11451771"
     exon            1..59
                     /gene="Dmrtc1a"
                     /gene_synonym="Dmrtc1"
                     /inference="alignment:Splign:2.1.0"
     CDS             37..714
                     /gene="Dmrtc1a"
                     /gene_synonym="Dmrtc1"
                     /note="DMRT like family C1"
                     /codon_start=1
                     /product="doublesex- and mab-3-related transcription
                     factor C1"
                     /protein_id="NP_001020459.1"
                     /db_xref="GeneID:108348153"
                     /db_xref="RGD:11451771"
                     /translation="MQRPSGSREVRKAVSAVSASKKEQATRVKKHVVRRQKGTMAAAP
                     KSHVHVKKLTVEEGVRTGKNSVHQLQAQVDTATQQESSQGPVLLSQLPETTSVPYTPE
                     TMGQQLTVSLSGEPYGPSAMPSMCPSLILQPCATTDPMLLQPQGSSASNQASVSATLE
                     WQEMLEAAEALLALKNSSQTRHQPCGMPGTAGERGLQLPNPSMPPRPASSGSLPSGHL
                     DCMSLLT"
     exon            60..217
                     /gene="Dmrtc1a"
                     /gene_synonym="Dmrtc1"
                     /inference="alignment:Splign:2.1.0"
     exon            218..273
                     /gene="Dmrtc1a"
                     /gene_synonym="Dmrtc1"
                     /inference="alignment:Splign:2.1.0"
     exon            274..410
                     /gene="Dmrtc1a"
                     /gene_synonym="Dmrtc1"
                     /inference="alignment:Splign:2.1.0"
     exon            411..471
                     /gene="Dmrtc1a"
                     /gene_synonym="Dmrtc1"
                     /inference="alignment:Splign:2.1.0"
     exon            472..601
                     /gene="Dmrtc1a"
                     /gene_synonym="Dmrtc1"
                     /inference="alignment:Splign:2.1.0"
     exon            602..1135
                     /gene="Dmrtc1a"
                     /gene_synonym="Dmrtc1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcagcctgaa cacacgttcc actggctgaa ctgaaaatgc agaggccttc gggttcacgg
       61 gaagtacgta aagcagtttc tgctgtgagt gcctccaaga aggagcaggc cacacgggta
      121 aagaaacacg tggttcggag acagaaaggg actatggctg ctgcccctaa atcgcacgtg
      181 catgtcaaga aattgactgt ggaagaagga gttcgcactg gaaaaaacag tgtgcaccaa
      241 ctccaggccc aggttgacac agcaactcag caggagagct cccaagggcc tgtgcttctg
      301 agccagctcc cagaaacaac atctgtgcca tatactccag agacaatggg gcaacaactg
      361 acggtgtccc tttctgggga gccctatggg ccctctgcca tgccaagcat gtgcccaagc
      421 ctgattcttc agccctgtgc caccaccgac ccgatgctac tgcagccaca gggctccagt
      481 gcctccaacc aggcttcagt ttctgccacc ttagagtggc aggagatgct ggaggctgct
      541 gaggctctgc tggctctgaa aaattcttct cagacacgtc accagccctg tggcatgccc
      601 ggtactgctg gagagagggg actgcagctg cccaacccct ctatgccacc aaggcctgca
      661 agctctggtt cgctgccttc tggacatctg gattgcatgt ccctcttgac ctaagaaccc
      721 agactatgag gcctcgctaa agcactgcct gattgattcc tgtttctgaa cttgcaaaat
      781 ggctcctgtc caaagtgctt aatgtgtttt ttaagcattc aggtatttta taagctttca
      841 gatccttttt atgatgtagg gcaattactt ggctttccta tgttctttac cccacccctt
      901 atttctttgg aagctggggc tttttatgtg tcttataaaa tgctttgtgc aatctaatat
      961 gatcaatcaa tcagtgggtt ctgagtggta tcaaatgcca gtgttttcct ttgtgtgcac
     1021 tcacttgcac acataattgt gcactactgt acttaaacat gcatgtggaa acatgaggat
     1081 tttcacattg catctagatt tgtgtgttac caaaaataaa taattttgta aggcaaaaaa
     1141 aaaaaaaaaa aaaaaaaaa
//
