LOCUS       XM_039111277            2605 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus DM1 protein kinase (Dmpk), transcript
            variant X13, mRNA.
ACCESSION   XM_039111277
VERSION     XM_039111277.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2605
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2605
                     /gene="Dmpk"
                     /gene_synonym="Dm15"
                     /note="DM1 protein kinase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 91 ESTs, 3 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     89 samples with support for all annotated introns"
                     /db_xref="GeneID:308405"
                     /db_xref="RGD:1309825"
     CDS             577..1890
                     /gene="Dmpk"
                     /gene_synonym="Dm15"
                     /codon_start=1
                     /product="myotonin-protein kinase isoform X13"
                     /protein_id="XP_038967205.1"
                     /db_xref="GeneID:308405"
                     /db_xref="RGD:1309825"
                     /translation="MRTTWDIKPDNILLDRCGHIRLADFGSCLKLQPDGTVRSLVAVG
                     TPDYLSPEILQAVGGGPGAGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYAKIV
                     HYREHLSLPRADMGVPEEAQDLIRGLLCPAEIRLGRGGAGDFQKHPFFFGLDWEGLRD
                     SVPPFTPDFEGATDTCNFDVVEDRLTAMETLSDMQEDMALGVHLPFVGYSYSCMASRD
                     NQVTDPTPMELEALQLPVSDLQGLDLPPPVSPPDQAAEEADPAAVPVPPAETETMVTL
                     RELQEALEEEVLTRQSLSRELEAIRTANQNFSSQLQEAEVRNRDLEAHVRQLQERMEM
                     LQAPGAAAVTGVPSPRATDPPSHLDGPPAVAVGQCPLVGPGPMHRRHLLFPARVPRPG
                     LSEAHCLLLFAAALAAAATLGCTGLVAYTGRLTPVWCFSGATFAP"
ORIGIN      
        1 gcctcaggca tagaactggc cagagagacc caggggatag tcagggacag gcagacatgc
       61 agccagggtt ctggggcctg gacaggggca gccaggcccc gtgacgggag gaccccgagc
      121 tccggcccgg ggaggggcca tggtgttgcc tgcccaacat gtcagccgaa gtgcggctga
      181 ggcagctcca gcagctggtg ctggacccag gcttcctggg gctggagccc ctgctcgacc
      241 ttctcctggg cgtccaccag gagctgggcg cctcccacct agcccaggac aagtatgtgg
      301 ccgacttttt gcaatgggtg gagcccattg cagcaaggct taaggaggtc cgactgcaga
      361 gggatgactt tgagattttg aaggtgatcg ggcgtggggc gttcagtgag gtagcggtgg
      421 tgaagatgaa acagaccggc caagtgtatg ccatgaagat tatgaataag tgggacatgc
      481 tgaagagagg cgaggtgtca tgcttccggg aagaaaggga tgtattagtg aaaggggacc
      541 ggcgctggat cacacagttg cactttgcct tccaggatga gaactacctg ggacatcaaa
      601 ccagataaca ttctgctgga ccgatgtggg cacattcgcc tggcagattt tggctcctgc
      661 ctcaaattgc agcctgatgg aacggtgagg tcgctggtgg ctgtgggcac cccggactac
      721 ctgtctcctg agattctgca ggctgttggt ggagggcctg gggcaggcag ctacgggcca
      781 gagtgtgact ggtgggcact gggcgtgttt gcctacgaaa tgttctatgg gcagacaccc
      841 ttctacgccg actccacagc cgagacgtat gccaaaattg tgcattacag ggaacacttg
      901 tctctgcctc gggcagacat gggtgtccct gaggaagctc aggacctcat tcgtgggctg
      961 ctgtgtcctg ctgagataag gctcggtaga ggtggggcag gtgacttcca gaagcatcct
     1021 ttcttctttg gccttgattg ggagggtctc cgggacagcg tgcccccctt cacaccagac
     1081 ttcgagggtg ccacagacac atgcaatttt gatgtggtgg aggaccggct cactgccatg
     1141 gagacactgt ccgacatgca ggaagacatg gcactcgggg tgcacctgcc ttttgtgggt
     1201 tactcctact cttgcatggc ctcaagagac aatcaggtca cggaccccac ccctatggaa
     1261 ctagaggccc tgcagttgcc tgtgtcagac ttgcaagggc ttgacttgcc gccccccgtg
     1321 tccccaccgg atcaagcggc tgaagaggct gaccccgcgg ctgtccctgt ccctccggct
     1381 gagacagaga ccatggtgac gctgcgggag ctccaggaag ccttggaaga agaggttctc
     1441 acccggcaga gcctgagccg cgagctggag gccatccgta ccgctaacca gaacttctcc
     1501 agccaactac aggaggccga ggtccggaac cgagacctgg aggcgcatgt tcggcagcta
     1561 caggagcgga tggagatgct gcaggcccca ggagctgcag ctgtcacggg ggtccccagt
     1621 ccccgggcca cggatccacc ttcccatcta gatggccccc cggccgtggc tgtgggccag
     1681 tgcccgctgg tggggccagg ccccatgcac cgccgtcacc tgctgttccc tgccagggtc
     1741 cctaggcctg gcctatccga ggcgcattgc ctgctcctgt tcgccgctgc tctggctgct
     1801 gccgccacac tgggctgcac tgggttggtg gcctataccg gccgtctcac cccagtctgg
     1861 tgtttctcgg gagccacctt cgccccctga accctaagac tccaagccat ttttcattta
     1921 ggcctcctag gaaggtcgag tgaccagaga aagacccaga gcctctctgt gcccatattc
     1981 acccccgacc ccccactgct ctgctccact ccacacttct gtgagcctgg gtccctatcc
     2041 tgctccgctc ctgtgatccg ggcccgcccc ctggcggctg gggagggagg aagagggctc
     2101 gtgcccagca ccccggttcc tgcagagcta ctgctgacta ctactgcagc ccaggcattc
     2161 gccaaccatg cttttactca gccccgacgt ggatgggcaa actggtcagc tcatccgatt
     2221 tcacttttca cgcccccagc catcagttaa aagccataag caataagtcc cttatctctg
     2281 gagacatccc attcccataa ggaaggatga gcaagacctc tgccagcaca catgggagtc
     2341 tttggcttcg gacagtctca ctcctggggg ttctgcaact ccttcctcac gtacactccc
     2401 gtactctccc gtcggagcca cggctgcaca cacccccaag gcagtgtggg tatttattga
     2461 ccttgttctc tgactcactg acagactccg ggacccacgt tttggatgca ctgagactcg
     2521 acattcctcg gtatttattg tctgtcccca cctacgacct ccactcctga ccctcgcaaa
     2581 taaaatactt ctggctgccc taaaa
//
