LOCUS       XM_039111235            2807 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus DM1 protein kinase (Dmpk), transcript
            variant X6, mRNA.
ACCESSION   XM_039111235
VERSION     XM_039111235.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086019) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2807
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..2807
                     /gene="Dmpk"
                     /gene_synonym="Dm15"
                     /note="DM1 protein kinase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 136
                     ESTs, 57 long SRA reads, 1 Protein"
                     /db_xref="GeneID:308405"
                     /db_xref="RGD:1309825"
     CDS             167..2092
                     /gene="Dmpk"
                     /gene_synonym="Dm15"
                     /codon_start=1
                     /product="myotonin-protein kinase isoform X6"
                     /protein_id="XP_038967163.1"
                     /db_xref="GeneID:308405"
                     /db_xref="RGD:1309825"
                     /translation="MSAEVRLRQLQQLVLDPGFLGLEPLLDLLLGVHQELGASHLAQD
                     KYVADFLQWVEPIAARLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIM
                     NKWDMLKRGEVSCFREERDVLVKGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLL
                     SKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCL
                     KLQPDGTVRSLVAVGTPDYLSPEILQAVGGGPGAGSYGPECDWWALGVFAYEMFYGQT
                     PFYADSTAETYAKIVHYREHLSLPRADMGVPEEAQDLIRGLLCPAEIRLGRGGAGDFQ
                     KHPFFFGLDWEGLRDSVPPFTPDFEGATDTCNFDVVEDRLTAMETLSDMQEDMALGVH
                     LPFVGYSYSCMASRDNQVTDPTPMELEALQLPVSDLQGLDLPPPVSPPDQAAEEADPA
                     AVPVPPAETETMVTLRELQEALEEEVLTRQSLSRELEAIRTANQNFSSQLQEAEVRNR
                     DLEAHVRQLQERMEMLQAPGAAGESLTHSQPGGRRVEMGCHGGPQSPGHGSTFPYGPP
                     AVAVGQCPLVGPGPMHRRHLLFPARVPRPGLSEAHCLLLFAAALAAAATLGCTGLVAY
                     TGRLTPVWCFSGATFAP"
     polyA_site      2807
                     /gene="Dmpk"
                     /gene_synonym="Dm15"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aggaggaggc ctcaggcata gaactggcca gagagaccca ggggatagtc agggacaggc
       61 agacatgcag ccagggttct ggggcctgga caggggcagc caggccccgt gacgggagga
      121 ccccgagctc cggcccgggg aggggccatg gtgttgcctg cccaacatgt cagccgaagt
      181 gcggctgagg cagctccagc agctggtgct ggacccaggc ttcctggggc tggagcccct
      241 gctcgacctt ctcctgggcg tccaccagga gctgggcgcc tcccacctag cccaggacaa
      301 gtatgtggcc gactttttgc aatgggtgga gcccattgca gcaaggctta aggaggtccg
      361 actgcagagg gatgactttg agattttgaa ggtgatcggg cgtggggcgt tcagtgaggt
      421 agcggtggtg aagatgaaac agaccggcca agtgtatgcc atgaagatta tgaataagtg
      481 ggacatgctg aagagaggcg aggtgtcatg cttccgggaa gaaagggatg tattagtgaa
      541 aggggaccgg cgctggatca cacagttgca ctttgccttc caggatgaga actacctgta
      601 cctggtcatg gaatactacg tgggcgggga cctgctaacg ctgctgagca agtttgggga
      661 gcggatcccc gccgagatgg cgcgcttcta cctggccgag attgtcatgg ccatagactc
      721 ggtgcaccgg ctgggctacg tgcacaggga catcaaacca gataacattc tgctggaccg
      781 atgtgggcac attcgcctgg cagattttgg ctcctgcctc aaattgcagc ctgatggaac
      841 ggtgaggtcg ctggtggctg tgggcacccc ggactacctg tctcctgaga ttctgcaggc
      901 tgttggtgga gggcctgggg caggcagcta cgggccagag tgtgactggt gggcactggg
      961 cgtgtttgcc tacgaaatgt tctatgggca gacacccttc tacgccgact ccacagccga
     1021 gacgtatgcc aaaattgtgc attacaggga acacttgtct ctgcctcggg cagacatggg
     1081 tgtccctgag gaagctcagg acctcattcg tgggctgctg tgtcctgctg agataaggct
     1141 cggtagaggt ggggcaggtg acttccagaa gcatcctttc ttctttggcc ttgattggga
     1201 gggtctccgg gacagcgtgc cccccttcac accagacttc gagggtgcca cagacacatg
     1261 caattttgat gtggtggagg accggctcac tgccatggag acactgtccg acatgcagga
     1321 agacatggca ctcggggtgc acctgccttt tgtgggttac tcctactctt gcatggcctc
     1381 aagagacaat caggtcacgg accccacccc tatggaacta gaggccctgc agttgcctgt
     1441 gtcagacttg caagggcttg acttgccgcc ccccgtgtcc ccaccggatc aagcggctga
     1501 agaggctgac cccgcggctg tccctgtccc tccggctgag acagagacca tggtgacgct
     1561 gcgggagctc caggaagcct tggaagaaga ggttctcacc cggcagagcc tgagccgcga
     1621 gctggaggcc atccgtaccg ctaaccagaa cttctccagc caactacagg aggccgaggt
     1681 ccggaaccga gacctggagg cgcatgttcg gcagctacag gagcggatgg agatgctgca
     1741 ggccccagga gctgcaggcg agtccctcac gcactcccag ccaggaggac gccgggtgga
     1801 gatgggctgt cacgggggtc cccagtcccc gggccacgga tccaccttcc catatggccc
     1861 cccggccgtg gctgtgggcc agtgcccgct ggtggggcca ggccccatgc accgccgtca
     1921 cctgctgttc cctgccaggg tccctaggcc tggcctatcc gaggcgcatt gcctgctcct
     1981 gttcgccgct gctctggctg ctgccgccac actgggctgc actgggttgg tggcctatac
     2041 cggccgtctc accccagtct ggtgtttctc gggagccacc ttcgccccct gaaccctaag
     2101 actccaagcc atttttcatt taggcctcct aggaaggtcg agtgaccaga gaaagaccca
     2161 gagcctctct gtgcccatat tcacccccga ccccccactg ctctgctcca ctccacactt
     2221 ctgtgagcct gggtccctat cctgctccgc tcctgtgatc cgggcccgcc ccctggcggc
     2281 tggggaggga ggaagagggc tcgtgcccag caccccggtt cctgcagagc tactgctgac
     2341 tactactgca gcccaggcat tcgccaacca tgcttttact cagccccgac gtggatgggc
     2401 aaactggtca gctcatccga tttcactttt cacgccccca gccatcagtt aaaagccata
     2461 agcaataagt cccttatctc tggagacatc ccattcccat aaggaaggat gagcaagacc
     2521 tctgccagca cacatgggag tctttggctt cggacagtct cactcctggg ggttctgcaa
     2581 ctccttcctc acgtacactc ccgtactctc ccgtcggagc cacggctgca cacaccccca
     2641 aggcagtgtg ggtatttatt gaccttgttc tctgactcac tgacagactc cgggacccac
     2701 gttttggatg cactgagact cgacattcct cggtatttat tgtctgtccc cacctacgac
     2761 ctccactcct gaccctcgca aataaaatac ttctggctgc cctaaaa
//
