LOCUS       XM_039111232            2822 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus DM1 protein kinase (Dmpk), transcript
            variant X5, mRNA.
ACCESSION   XM_039111232
VERSION     XM_039111232.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086019) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2822
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..2822
                     /gene="Dmpk"
                     /gene_synonym="Dm15"
                     /note="DM1 protein kinase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 134
                     ESTs, 56 long SRA reads, 4 Proteins"
                     /db_xref="GeneID:308405"
                     /db_xref="RGD:1309825"
     CDS             167..2107
                     /gene="Dmpk"
                     /gene_synonym="Dm15"
                     /codon_start=1
                     /product="myotonin-protein kinase isoform X5"
                     /protein_id="XP_038967160.1"
                     /db_xref="GeneID:308405"
                     /db_xref="RGD:1309825"
                     /translation="MSAEVRLRQLQQLVLDPGFLGLEPLLDLLLGVHQELGASHLAQD
                     KYVADFLQWVEPIAARLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIM
                     NKWDMLKRGEVSCFREERDVLVKGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLL
                     SKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCL
                     KLQPDGTVRSLVAVGTPDYLSPEILQAVGGGPGAGSYGPECDWWALGVFAYEMFYGQT
                     PFYADSTAETYAKIVHYREHLSLPRADMGVPEEAQDLIRGLLCPAEIRLGRGGAGDFQ
                     KHPFFFGLDWEGLRDSVPPFTPDFEGATDTCNFDVVEDRLTAMVSGGGETLSDMQEDM
                     ALGVHLPFVGYSYSCMASRDNQVTDPTPMELEALQLPVSDLQGLDLPPPVSPPDQAAE
                     EADPAAVPVPPAETETMVTLRELQEALEEEVLTRQSLSRELEAIRTANQNFSSQLQEA
                     EVRNRDLEAHVRQLQERMEMLQAPGAAGESLTHSQPGGRRVEMGCHGGPQSPGHGSTF
                     PYGPPAVAVGQCPLVGPGPMHRRHLLFPARVPRPGLSEAHCLLLFAAALAAAATLGCT
                     GLVAYTGRLTPVWCFSGATFAP"
     polyA_site      2822
                     /gene="Dmpk"
                     /gene_synonym="Dm15"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aggaggaggc ctcaggcata gaactggcca gagagaccca ggggatagtc agggacaggc
       61 agacatgcag ccagggttct ggggcctgga caggggcagc caggccccgt gacgggagga
      121 ccccgagctc cggcccgggg aggggccatg gtgttgcctg cccaacatgt cagccgaagt
      181 gcggctgagg cagctccagc agctggtgct ggacccaggc ttcctggggc tggagcccct
      241 gctcgacctt ctcctgggcg tccaccagga gctgggcgcc tcccacctag cccaggacaa
      301 gtatgtggcc gactttttgc aatgggtgga gcccattgca gcaaggctta aggaggtccg
      361 actgcagagg gatgactttg agattttgaa ggtgatcggg cgtggggcgt tcagtgaggt
      421 agcggtggtg aagatgaaac agaccggcca agtgtatgcc atgaagatta tgaataagtg
      481 ggacatgctg aagagaggcg aggtgtcatg cttccgggaa gaaagggatg tattagtgaa
      541 aggggaccgg cgctggatca cacagttgca ctttgccttc caggatgaga actacctgta
      601 cctggtcatg gaatactacg tgggcgggga cctgctaacg ctgctgagca agtttgggga
      661 gcggatcccc gccgagatgg cgcgcttcta cctggccgag attgtcatgg ccatagactc
      721 ggtgcaccgg ctgggctacg tgcacaggga catcaaacca gataacattc tgctggaccg
      781 atgtgggcac attcgcctgg cagattttgg ctcctgcctc aaattgcagc ctgatggaac
      841 ggtgaggtcg ctggtggctg tgggcacccc ggactacctg tctcctgaga ttctgcaggc
      901 tgttggtgga gggcctgggg caggcagcta cgggccagag tgtgactggt gggcactggg
      961 cgtgtttgcc tacgaaatgt tctatgggca gacacccttc tacgccgact ccacagccga
     1021 gacgtatgcc aaaattgtgc attacaggga acacttgtct ctgcctcggg cagacatggg
     1081 tgtccctgag gaagctcagg acctcattcg tgggctgctg tgtcctgctg agataaggct
     1141 cggtagaggt ggggcaggtg acttccagaa gcatcctttc ttctttggcc ttgattggga
     1201 gggtctccgg gacagcgtgc cccccttcac accagacttc gagggtgcca cagacacatg
     1261 caattttgat gtggtggagg accggctcac tgccatggtg agcgggggcg gggagacact
     1321 gtccgacatg caggaagaca tggcactcgg ggtgcacctg ccttttgtgg gttactccta
     1381 ctcttgcatg gcctcaagag acaatcaggt cacggacccc acccctatgg aactagaggc
     1441 cctgcagttg cctgtgtcag acttgcaagg gcttgacttg ccgccccccg tgtccccacc
     1501 ggatcaagcg gctgaagagg ctgaccccgc ggctgtccct gtccctccgg ctgagacaga
     1561 gaccatggtg acgctgcggg agctccagga agccttggaa gaagaggttc tcacccggca
     1621 gagcctgagc cgcgagctgg aggccatccg taccgctaac cagaacttct ccagccaact
     1681 acaggaggcc gaggtccgga accgagacct ggaggcgcat gttcggcagc tacaggagcg
     1741 gatggagatg ctgcaggccc caggagctgc aggcgagtcc ctcacgcact cccagccagg
     1801 aggacgccgg gtggagatgg gctgtcacgg gggtccccag tccccgggcc acggatccac
     1861 cttcccatat ggccccccgg ccgtggctgt gggccagtgc ccgctggtgg ggccaggccc
     1921 catgcaccgc cgtcacctgc tgttccctgc cagggtccct aggcctggcc tatccgaggc
     1981 gcattgcctg ctcctgttcg ccgctgctct ggctgctgcc gccacactgg gctgcactgg
     2041 gttggtggcc tataccggcc gtctcacccc agtctggtgt ttctcgggag ccaccttcgc
     2101 cccctgaacc ctaagactcc aagccatttt tcatttaggc ctcctaggaa ggtcgagtga
     2161 ccagagaaag acccagagcc tctctgtgcc catattcacc cccgaccccc cactgctctg
     2221 ctccactcca cacttctgtg agcctgggtc cctatcctgc tccgctcctg tgatccgggc
     2281 ccgccccctg gcggctgggg agggaggaag agggctcgtg cccagcaccc cggttcctgc
     2341 agagctactg ctgactacta ctgcagccca ggcattcgcc aaccatgctt ttactcagcc
     2401 ccgacgtgga tgggcaaact ggtcagctca tccgatttca cttttcacgc ccccagccat
     2461 cagttaaaag ccataagcaa taagtccctt atctctggag acatcccatt cccataagga
     2521 aggatgagca agacctctgc cagcacacat gggagtcttt ggcttcggac agtctcactc
     2581 ctgggggttc tgcaactcct tcctcacgta cactcccgta ctctcccgtc ggagccacgg
     2641 ctgcacacac ccccaaggca gtgtgggtat ttattgacct tgttctctga ctcactgaca
     2701 gactccggga cccacgtttt ggatgcactg agactcgaca ttcctcggta tttattgtct
     2761 gtccccacct acgacctcca ctcctgaccc tcgcaaataa aatacttctg gctgccctaa
     2821 aa
//
