LOCUS       XM_008759050            1916 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus DM1 protein kinase (Dmpk), transcript
            variant X11, mRNA.
ACCESSION   XM_008759050
VERSION     XM_008759050.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_008759050.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1916
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1916
                     /gene="Dmpk"
                     /gene_synonym="Dm15"
                     /note="DM1 protein kinase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 83
                     ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 105 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:308405"
                     /db_xref="RGD:1309825"
     CDS             167..1780
                     /gene="Dmpk"
                     /gene_synonym="Dm15"
                     /codon_start=1
                     /product="myotonin-protein kinase isoform X11"
                     /protein_id="XP_008757272.1"
                     /db_xref="GeneID:308405"
                     /db_xref="RGD:1309825"
                     /translation="MSAEVRLRQLQQLVLDPGFLGLEPLLDLLLGVHQELGASHLAQD
                     KYVADFLQWVEPIAARLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIM
                     NKWDMLKRGEVSCFREERDVLVKGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLL
                     SKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCL
                     KLQPDGTVRSLVAVGTPDYLSPEILQAVGGGPGAGSYGPECDWWALGVFAYEMFYGQT
                     PFYADSTAETYAKIVHYREHLSLPRADMGVPEEAQDLIRGLLCPAEIRLGRGGAGDFQ
                     KHPFFFGLDWEGLRDSVPPFTPDFEGATDTCNFDVVEDRLTAMVSGGGETLSDMQEDM
                     ALGVHLPFVGYSYSCMASRDNQVTDPTPMELEALQLPVSDLQGLDLPPPVSPPDQAAE
                     EADPAAVPVPPAETETMVTLRELQEALEEEVLTRQSLSRELEAIRTANQNFSSQLQEA
                     EVRNRDLEAHVRQLQERMEMLQAPGAAGP"
ORIGIN      
        1 aggaggaggc ctcaggcata gaactggcca gagagaccca ggggatagtc agggacaggc
       61 agacatgcag ccagggttct ggggcctgga caggggcagc caggccccgt gacgggagga
      121 ccccgagctc cggcccgggg aggggccatg gtgttgcctg cccaacatgt cagccgaagt
      181 gcggctgagg cagctccagc agctggtgct ggacccaggc ttcctggggc tggagcccct
      241 gctcgacctt ctcctgggcg tccaccagga gctgggcgcc tcccacctag cccaggacaa
      301 gtatgtggcc gactttttgc aatgggtgga gcccattgca gcaaggctta aggaggtccg
      361 actgcagagg gatgactttg agattttgaa ggtgatcggg cgtggggcgt tcagtgaggt
      421 agcggtggtg aagatgaaac agaccggcca agtgtatgcc atgaagatta tgaataagtg
      481 ggacatgctg aagagaggcg aggtgtcatg cttccgggaa gaaagggatg tattagtgaa
      541 aggggaccgg cgctggatca cacagttgca ctttgccttc caggatgaga actacctgta
      601 cctggtcatg gaatactacg tgggcgggga cctgctaacg ctgctgagca agtttgggga
      661 gcggatcccc gccgagatgg cgcgcttcta cctggccgag attgtcatgg ccatagactc
      721 ggtgcaccgg ctgggctacg tgcacaggga catcaaacca gataacattc tgctggaccg
      781 atgtgggcac attcgcctgg cagattttgg ctcctgcctc aaattgcagc ctgatggaac
      841 ggtgaggtcg ctggtggctg tgggcacccc ggactacctg tctcctgaga ttctgcaggc
      901 tgttggtgga gggcctgggg caggcagcta cgggccagag tgtgactggt gggcactggg
      961 cgtgtttgcc tacgaaatgt tctatgggca gacacccttc tacgccgact ccacagccga
     1021 gacgtatgcc aaaattgtgc attacaggga acacttgtct ctgcctcggg cagacatggg
     1081 tgtccctgag gaagctcagg acctcattcg tgggctgctg tgtcctgctg agataaggct
     1141 cggtagaggt ggggcaggtg acttccagaa gcatcctttc ttctttggcc ttgattggga
     1201 gggtctccgg gacagcgtgc cccccttcac accagacttc gagggtgcca cagacacatg
     1261 caattttgat gtggtggagg accggctcac tgccatggtg agcgggggcg gggagacact
     1321 gtccgacatg caggaagaca tggcactcgg ggtgcacctg ccttttgtgg gttactccta
     1381 ctcttgcatg gcctcaagag acaatcaggt cacggacccc acccctatgg aactagaggc
     1441 cctgcagttg cctgtgtcag acttgcaagg gcttgacttg ccgccccccg tgtccccacc
     1501 ggatcaagcg gctgaagagg ctgaccccgc ggctgtccct gtccctccgg ctgagacaga
     1561 gaccatggtg acgctgcggg agctccagga agccttggaa gaagaggttc tcacccggca
     1621 gagcctgagc cgcgagctgg aggccatccg taccgctaac cagaacttct ccagccaact
     1681 acaggaggcc gaggtccgga accgagacct ggaggcgcat gttcggcagc tacaggagcg
     1741 gatggagatg ctgcaggccc caggagctgc aggtccctag gcctggccta tccgaggcgc
     1801 attgcctgct cctgttcgcc gctgctctgg ctgctgccgc cacactgggc tgcactgggt
     1861 tggtggccta taccggccgt ctcaccccag tctggtgttt ctcgggagcc accttc
//
