LOCUS       XM_039097953            7899 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus deleted in malignant brain tumors 1
            like 1 (Dmbt1l1), mRNA.
ACCESSION   XM_039097953
VERSION     XM_039097953.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..7899
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7899
                     /gene="Dmbt1l1"
                     /note="deleted in malignant brain tumors 1 like 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 23 Proteins, and 59% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:691970"
                     /db_xref="RGD:1593322"
     CDS             1..7425
                     /gene="Dmbt1l1"
                     /codon_start=1
                     /product="deleted in malignant brain tumors 1 protein"
                     /protein_id="XP_038953881.1"
                     /db_xref="GeneID:691970"
                     /db_xref="RGD:1593322"
                     /translation="MSCHARLLWLLFFHTAILPEAACYRRDIRGSGARLGKERPKRSP
                     IQGISEEPQQGNGEELVARPQGNGNPATILSVLPAAISTQPSSKLAPSSLASVLPVAD
                     PVPGSRRAHVPRLSLNGADMSPDPTPVIDPDPESSKPSGDWAPVRLSGNHGSCAGRVE
                     LFYQGVWGTVCDDLWDLTEANIICRQLGCGRAVSALSEAYFGQGSGKILLDNVHCKGH
                     EEHLEECSHLGWFSHNCDHSEDASVICSDAEYGMATLSDHPLAVMEGAMNPEKSRCGG
                     VITKAPGKIKNPPMNEMHDNITCVWEIRANTSDRIRLAFPSLDLDCTNEYFEILDGPP
                     SSVKSLGKPCRGLHVTFASHSNSMTLVYFRGENNIGKNFMAYYYFEAKEVTTKTPYLI
                     TIPTATSKMVTERPQFSKPAQPTHTPSGNVSPLPVPDSGDWPELRLVGGSNRCSGRVE
                     ILYQGVWGTVCDDLWDLNEAEVVCRQLGCGQAVSALGKAYFGPGSGDIFLDNLQCAGV
                     EHFLGQCAHSGWSDHNCGHHEDAGVICSDAEKPLSHVPGDWPELRLVGGSSRCSGRVE
                     ILHQGVWGTICDDLWGSNEAEVVCRQLECGQAVSSLGEAYFGPGSGDIFLDNLQCSGL
                     EHYLSQCPHSGWSEHNCGHHEDAGVICSDSGAPPPPMPPGPPPTSQDPLTGGSNSCGG
                     VISSLSGSFTSPQYPENYPTDIQCVWEIHVEKNFRIELMIPNLNLEDILGCPYDSVEI
                     FDGPRIPSLSMGKFCAPSAVVFFSSSDILTVVFRSDYMTTNTGFYAFFNAIPQDGKES
                     EERPVLRLAGSSGQCSGRVEILHQGAWGTVCDDLWDLNEAEVVCRQLGCGHAIAAPGS
                     AYFGPGSGNILLDNIQCSGKENHFGQCSSSAWLDHNCGHHEDAGVICSDAEVTPSPTE
                     GSQSCGGVISSLSGSFSSPWYPTNYPTDTECIWEIHVAEKFNIELTIPSLKLEDIYGC
                     PYDFVEVFDGQQVASLSMGKVCAGAELTFLSSSNFMTVVFKSDTMITNTGFYALYNTV
                     LQGERQNGMALRLVNGSHRCEGRVEISYNGTWGTVCDDSWDLTDAKVVCQQLGCGKAL
                     SAPAESYFDKGMGHIMLDDVQCMGDEAKVWQCTHLGWFSHNCGHHEDASVVCSGMDEA
                     PSGEPSDEIFHCGGLLTNSSGSFSSPWYPKKYPTNVVCAWDIQVDTGAHIRLTFEVVK
                     MENFYGCPYDFIEIFDGPRSEPFSLGRFCSETTPIFTSSSSHMSVVFHSDAIVTNIGF
                     FASYESLLQDEKNTDVALRLANGSHPCEGRVELYYNGSWGTVCDDSWDLRDAQVVCRQ
                     LGCGGAVVAIGRAHFERGLGPIVLDDVECMGTEARLWQCLHSGWLAHNCGHHEDAGVV
                     CSASLSQPAPSFPVSDMISALLGKQPEVHTSPGLALRLVNGTSRCEGRVEVCFANTWG
                     TVCGDNWSIEDAHVVCRQLGCGPALSALPGSSFGPGSGSIALDDVNCTGKESSLAECP
                     HRDWLTHNCGHQEDAGVICSDSAANGHPATPAPEEHPHDLHPDLQLVRLSDGRSQCEG
                     RVEIYFNGTWGTVCDDLWGIQAAQVVCQQLGCGAALAAPRSSLFGDGSGPIFLDDVRC
                     LGTETNLGHCHHLGLSVHNCEHHEDAGAVCSAVGVASAPAGVVPKADSLIIRLVDGKN
                     RCEGRVEVHHNGTWGTVCDDLWDIEDAHVVCQQLNCGKGVSALGSGYFGEGVGSIFLD
                     DVRCQGNETSLSQCHHPGLSVHNCGHHEDASVICSASDTERPTSLGNVSFFTVFSTSV
                     PTSNPATVWVPATGSTTAVVEVTPLSGKGLCPPHCTDVPLTSTEEESSSDTSSTSTES
                     SPPNDASSVSAEEETSSDASSASEEEETSSGVSSSEEVASSDVSSPSADTSSSNDASS
                     ASAEEISSDMSSTSAEGESGQSTDASSASVDASSDVSSGSAEDTASDSSSSSAESGSP
                     TDASSDSAQETSSDSSSASAEASSPDVSSASAEGKSGEPSDASSTSAEEETSSDTSST
                     SAESSSTTDTSSASASAEESSSSETSSASAEARSPDDISSTPSKPTSPRATVPTLTKV
                     TPSPDLPLRLVGGQNRCEGRLEVRHEGEWGTVCDDRWNIKNARVVCRLLGCGPALGAP
                     GRSHFGPGTGPILMNEVRCSGREDSLESCAHAGWTRHNCHHREDASVICAGPADSLVP
                     KDNAQLSCLPHLFQAVIDRGYLRRLGYSSWDIHLNDKMCRPQVTGRYLIFNIPYGHCG
                     TVMQKHQGSLSYSNSIRGRTQGHPGRVIVRHKVPQVKFTCKVDGQSAVEIVHGSDTKD
                     EASYDVSISFLQSPVSQNTGGRAPLASQREEVFLQATLHSHNPNLRLVVDTCVASPDA
                     SDFTTVKYDLIQEGCIKDNSYSNLHAPEKNVAQFKFNAFSFLKSYDVVYVQCKVAVCR
                     LGDHSSRCSQGCLNRGRRGAGSAEVREEQTEYFQTVGPLKIHREANQSKVLV"
ORIGIN      
        1 atgagctgcc acgcccgcct actttggctg ctgttcttcc acactgcgat tctacctgaa
       61 gcagcttgtt acaggaggga catcagaggg tccggagcaa ggctggggaa ggaacggcct
      121 aagagaagcc ccatccaagg catatctgag gaacctcaac aaggaaatgg tgaagagctg
      181 gtggcaaggc ctcaaggcaa tggaaatcca gccaccatat tatcagttct gcctgctgcc
      241 atctccactc aaccatcttc taagcttgcc ccgagttccc ttgcatcagt tctacctgtg
      301 gctgacccag tacctggcag tcgaagagcg catgtgccca ggctcagcct caatggtgct
      361 gacatgtcac cagaccccac tccagtaata gatcccgatc ccgagtcatc aaagccatca
      421 ggagactggg cccctgtgcg gctgtcaggc aaccacggca gctgtgcggg ccgtgtagaa
      481 ctcttctacc aaggagtctg gggcactgtg tgtgatgacc tctgggacct cacagaagca
      541 aacatcatct gcaggcagct agggtgtggc cgggctgttt cagccctgag tgaagcttac
      601 tttgggcaag gttctgggaa gattcttctt gacaacgtgc attgcaaggg gcatgaggag
      661 cacctggagg agtgctccca ccttgggtgg ttctcccaca actgtgatca cagtgaagat
      721 gccagtgtca tctgctcaga tgctgaatac ggaatggcca cactatcaga tcatccattg
      781 gctgtcatgg aaggagcaat gaatccagaa aaatctcggt gtggtggagt tattaccaaa
      841 gcacctggaa aaattaagaa ccctccaatg aatgaaatgc atgacaacat aacgtgtgtg
      901 tgggaaatca gggcaaatac ctctgatcgt atacggctgg cattcccgtc tcttgatctc
      961 gactgcacca atgagtattt tgaaatcctg gatggccctc catcctctgt gaagtccctg
     1021 gggaaaccct gccgtgggtt gcacgtcacc tttgcatctc actccaactc gatgacccta
     1081 gtgtacttcc gaggagagaa caacattggg aaaaacttca tggcttatta ttattttgaa
     1141 gctaaagaag taacaacgaa gaccccgtat ctgatcacta tacccacagc aacttccaag
     1201 atggtaacag aaagaccaca attctcaaag cctgcacagc ctacacatac tcctagtggg
     1261 aatgtctcac ctcttcccgt gcctgactca ggggactggc cagagctgcg gctagtgggt
     1321 ggctccaatc gctgctcagg gcgtgtggag atcctctacc agggagtctg ggggactgtg
     1381 tgtgatgacc tgtgggacct gaatgaagct gaggtcgtat gcagacagct ggggtgtggt
     1441 caggctgtgt ctgcccttgg caaggcctac tttggccctg gctcgggaga tatcttccta
     1501 gataacctcc aatgtgctgg ggtggagcac ttcctgggtc agtgtgccca ttctggctgg
     1561 tcagatcaca actgtggcca ccatgaagat gctggtgtca tctgctcaga tgctgaaaaa
     1621 cctctgtccc atgttccagg agactggcca gaacttcgcc tagtgggtgg ctccagtcgg
     1681 tgctcaggac gagtggaaat cctccaccag ggagtctggg gcaccatatg tgatgacctg
     1741 tggggttcaa atgaagctga ggttgtatgc cgccagctag agtgtgggca ggctgtttct
     1801 agtcttggtg aggcttactt tggcccaggc tcaggagaca tcttcctaga caatcttcag
     1861 tgttccggac tggaacatta cctcagccag tgtccacatt cgggatggtc tgaacacaac
     1921 tgtgggcacc atgaggatgc tggtgttatc tgctcagatt caggtgcccc tcctccacct
     1981 atgccaccag gtcctcctcc aacttctcag gatccactaa caggaggaag taactcttgt
     2041 ggaggagtca tttccagcct ctctggttca tttacaagtc cacagtatcc agaaaactat
     2101 ccaacagaca tccaatgtgt ttgggagatc catgtggaga agaattttcg catagaactc
     2161 atgattccga atttgaacct ggaagatatc cttggatgtc cctatgactc agttgagatc
     2221 ttcgatggcc ccagaattcc atcactctcc atggggaagt tctgtgcccc atcagctgtg
     2281 gtatttttct cctcctcaga catcttgaca gttgtgttcc gcagtgatta catgacaaca
     2341 aacactggct tttatgcttt cttcaatgca attccacaag acggaaagga gtcagaagaa
     2401 agaccagtgc tgcggttggc aggcagctct ggacagtgct caggacgagt ggagatcctc
     2461 catcaggggg cctggggcac cgtgtgtgat gacctgtggg acctgaatga agctgaggtt
     2521 gtatgcagac agctggggtg tggccatgcc attgctgctc ctggaagtgc ctactttggt
     2581 ccaggctctg gaaacatcct tctggacaac attcagtgct caggaaagga aaaccacttt
     2641 ggccagtgtt ccagctctgc ctggttagac cacaattgtg gccaccatga ggatgctgga
     2701 gttatctgtt cagatgcaga ggtgacccct tcaccgacag agggaagtca gtcctgtgga
     2761 ggagtaattt caagtctctc aggctccttc tccagtcctt ggtatcctac taactacccc
     2821 actgacacag agtgcatctg ggagatacac gtggctgaga agttcaacat agaactgacc
     2881 atcccaagcc tgaaactgga ggacatctat gggtgccctt acgactttgt ggaagtgttc
     2941 gatggtcagc aagttgcctc actctccatg ggcaaagtct gtgctggggc agaactcaca
     3001 ttcctctcct cttcaaattt catgacggtg gtgtttaaaa gtgacaccat gatcaccaac
     3061 acaggcttct atgctctgta caacaccgtt ctgcaaggcg aaaggcaaaa tgggatggcc
     3121 ttgagactgg tgaatggtag ccacaggtgc gagggccgag tagagatctc ttacaacggg
     3181 acctggggca cagtgtgtga tgacagctgg gacctgacag atgccaaggt ggtgtgccag
     3241 cagctcggct gtggtaaggc cttgtcagcc ccagctgaga gctactttga taaaggcatg
     3301 ggccatatca tgctggacga tgtacaatgc atgggggatg aagcaaaggt gtggcaatgc
     3361 acacatcttg gatggttctc ccacaactgc gggcaccatg aggatgccag cgtggtctgc
     3421 tcaggtatgg acgaggcacc aagtggagaa ccatcagatg aaatcttcca ttgcggtggt
     3481 ttgctcacaa atagttcagg ctccttctcc agcccttggt atcctaaaaa ataccccaca
     3541 aatgtggtgt gtgcctggga catacaagtg gataccggtg ctcacatcag actcaccttc
     3601 gaagtggtca agatggaaaa tttctatggc tgcccctatg acttcattga gatttttgac
     3661 ggcccacgaa gtgaaccatt ttcgctgggg agattctgct ctgaaacaac cccaatattt
     3721 acctcttcct caagccacat gagtgtggtg ttccacagtg acgcaatcgt caccaacatt
     3781 ggattctttg catcttatga gtctctgttg caagatgaga aaaacacaga tgtggcactc
     3841 agactagcca atggcagcca cccatgtgag ggccgcgtgg agctctacta caatgggagc
     3901 tggggtacag tgtgtgatga cagctgggac ctgagagatg cccaggtggt gtgccggcag
     3961 ctgggctgtg gtggggctgt ggtagccatt ggccgagcac attttgagcg aggcttaggc
     4021 cccattgtcc tggacgatgt ggagtgcatg ggaacggaag caagactgtg gcagtgtctg
     4081 cacagtggct ggctcgccca caactgtggc caccacgaag atgctggtgt tgtctgctca
     4141 gcctctttgt cccagccagc accatccttt cccgtgagtg atatgatttc agccttgcta
     4201 ggaaagcagc cagaggtgca cacatcacca ggtctggccc tgcggctggt gaatgggaca
     4261 agcaggtgtg aaggccgagt tgaagtgtgc tttgccaaca cctgggggac tgtgtgtggt
     4321 gacaactggt ccatagagga tgcccacgtg gtctgcagac aacttggctg tggtccagct
     4381 ttatctgccc tgccaggcag cagttttggc cctgggtcag gcagcatcgc ccttgatgat
     4441 gtaaactgca caggaaaaga atcttccctg gcagagtgcc ctcacagaga ctggctcacc
     4501 cacaattgtg ggcaccagga agatgctggt gttatctgtt cagattctgc agctaatgga
     4561 catccagcta ctccagctcc tgaggaacat ccacacgatt tgcatccaga tctgcagctg
     4621 gtgaggctgt ccgatgggag aagccagtgt gagggccgcg tagaaatcta cttcaatggg
     4681 acctggggga ccgtgtgtga cgatctttgg ggcatacagg ctgcccaagt agtatgtcaa
     4741 caactgggct gtggggcagc cctggcagcc cccaggagca gtctatttgg ggatggctct
     4801 ggccccatct tcctagacga cgtgagatgc ctgggcacag aaaccaacct ggggcactgc
     4861 caccacctcg gcctttctgt gcacaactgt gaacaccacg aggatgcagg cgccgtctgt
     4921 tcagctgttg gtgttgcctc agctccagca ggagtggttc ccaaagctga ctcgcttata
     4981 atcaggttgg tggatggaaa aaatcgatgt gaagggagag tggaagtcca ccacaatggc
     5041 acgtggggca ctgtttgtga tgacctctgg gacatcgaag acgcccatgt ggtgtgccag
     5101 caactgaact gcgggaaggg tgtcagtgcc cttgggagtg gctactttgg agagggtgta
     5161 ggcagcatct tcctggacga tgtgaggtgc cagggcaatg agacctcgct aagccagtgc
     5221 caccacccag gcttgtctgt ccacaactgt ggccaccatg aagatgccag tgtcatctgc
     5281 tcagcatcag acacagaaag gccaacttca ctgggtaatg tttctttctt tactgttttc
     5341 tctacatcag ttcctacctc aaacccagcc acagtttggg tccctgcaac tggcagcacc
     5401 accgctgtgg tagaagtaac tcctttatct ggtaagggcc tctgcccacc acactgcaca
     5461 gatgtgcctt taacctccac cgaagaggag agctcctctg acacatcttc aacctcaaca
     5521 gaatcaagcc ctccaaatga tgcatcttca gtctcagcag aagaggagac atcctctgat
     5581 gcatcttcag cctcagaaga agaagaaaca tcttcaggtg tatcttcatc agaggaagtg
     5641 gcctcttctg acgtttcttc accctcagca gacacaagtt cttcaaacga tgcatcttcg
     5701 gcctcagcag aagagatatc ctctgatatg tcttcaacct cggcagaagg ggagagtgga
     5761 cagtcaactg atgcatcttc agcctcagtg gatgcctcct cagatgtgtc ttcaggctct
     5821 gcagaagata ctgcctctga cagctcttca tcctcagcag aatcaggctc tccaactgat
     5881 gcatcttcag actcggcaca ggagacctct tcagatagtt cttcagcctc agcagaagca
     5941 agttctccag acgtgtcttc agcctcagca gaagggaaga gtggagagcc aagtgatgca
     6001 tcttcgactt ctgcagaaga agagacatcc tcagatacgt cttcaacctc agcagaatca
     6061 agctctacaa ctgatacatc ttcagcctca gcatcagcag aagagtccag ctcctctgaa
     6121 acttcttcag cctcagcaga ggcaagatct ccagatgata tttcttcgac cccatcaaag
     6181 ccaacctctc caagggccac ggttccaact ttgacaaaag tgactccgtc gcctgacctg
     6241 cctctgcgct tggtaggcgg gcagaaccgc tgtgagggcc ggctggaggt gcggcacgag
     6301 ggggagtggg gaactgtgtg cgatgaccgc tggaacatca agaacgcccg ggttgtgtgc
     6361 cgcctcctgg gctgcggtcc agcgctaggc gccccaggta gaagccactt tgggcccggc
     6421 acaggcccca tcctgatgaa tgaagtgcgc tgctctggca gggaggactc tctggagagc
     6481 tgtgcccacg ctggctggac aagacacaac tgtcaccacc gcgaggatgc tagtgtgatc
     6541 tgtgcaggtc cagcagactc tcttgtgccc aaggataatg cccagctatc ttgcttgcct
     6601 cacctcttcc aagctgttat tgaccgaggc tatctccgga gactaggcta ctcctcctgg
     6661 gacatccact taaatgataa gatgtgtcgc ccccaagtca ctgggcgtta cctcatcttc
     6721 aatattccgt atggccactg tggcaccgtc atgcagaagc accagggctc tctcagctac
     6781 tccaactcca tccgaggcag aacacaaggc caccctggcc gagtcattgt gaggcacaag
     6841 gtaccccagg tgaagttcac ctgcaaagtg gatggccagt ctgcagttga aatcgtgcat
     6901 gggagtgaca ctaaagacga agccagctat gatgtatcaa tttcatttct ccagtcacct
     6961 gtatctcaga atacaggggg cagagctcct ttggctagtc agagggaaga ggtcttcctc
     7021 caggccaccc tccacagcca caaccccaat ctgaggctcg ttgtggacac ctgtgtggct
     7081 tctcctgatg ccagtgattt cacaactgtc aagtatgatt tgatccagga aggctgcatc
     7141 aaagataatt cttactccaa cctccatgcc cctgagaaga acgtggccca gttcaagttc
     7201 aatgccttca gcttcctcaa gagctacgat gtggtctacg tgcagtgtaa agttgctgtc
     7261 tgccgactcg gggaccactc ttcccgatgc tcacaaggct gtctgaatcg gggaaggaga
     7321 ggtgcaggct ctgcagaggt cagagaggaa caaactgagt atttccaaac agtggggcca
     7381 ctgaagatac acagagaagc taatcaaagc aaggtcctgg tgtgatctct ccctcttgct
     7441 ctcactgagc atgtcggaaa actggattca gatctgtttc ttatcagcaa gcaatgtttg
     7501 atggctcaga agccagacgt tgaccacacg gtctacacag ccatgcagac aggtggaaga
     7561 acccgaggga ctctctgggg tttgttacta aatagatccc tgagcattaa cttctaaggc
     7621 agttgttctg tttgtaggct taaagaaaat gctgattttt gttcttaccg ttcactttca
     7681 agaacttgat cattgtctta aaatgtgcaa aacattaggg aaaacggggt tgtctctctt
     7741 taccctgtgg ccaattaaag attgttttta aatgtctact tactgtttgg gtgctgatag
     7801 gtaggtgggt ctctttctgc tcttctagaa atgtaagaat tcacttccgg accttgccaa
     7861 ttatcttgta aaaaataaag tattttctag gaagccaaa
//
