LOCUS       XM_008762741            2578 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus distal-less homeobox 6 (Dlx6), mRNA.
ACCESSION   XM_008762741
VERSION     XM_008762741.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 19, 2024 this sequence was replaced by
            NM_001427389.1.
            
            On Jan 21, 2021 this sequence version replaced XM_008762741.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2578
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2578
                     /gene="Dlx6"
                     /note="distal-less homeobox 6; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     3 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 37 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:500023"
                     /db_xref="RGD:1561539"
     CDS             404..1300
                     /gene="Dlx6"
                     /codon_start=1
                     /product="homeobox protein DLX-6"
                     /protein_id="XP_008760963.2"
                     /db_xref="GeneID:500023"
                     /db_xref="RGD:1561539"
                     /translation="MMTMTTMADGLEGQDSSKSAFMEFGQQQQQQQQQQQQQQQQQQQ
                     QQQQPPPPPPPPPPQPHSQQTSPAMAGAHYPLHCLHSAAAAAAAAGSHHHHHQHHHHG
                     SPYASGGGNSYNHRSLAAYPYMSHSQHSPYLQSYHNSSAAAQTRGDDTDQQKTTVIEN
                     GEIRFNGKGKKIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKI
                     WFQNKRSKFKKLLKQGSNPHESDPLPGSAALSPRSPALPPVWDVSASAKGVSMPPNSY
                     MPGYSHWYSSPHQDTMQRPQMM"
ORIGIN      
        1 gcgtctgcat caagtctgaa agcagacgcg caactttcgc agaatccacc ttaaaatctc
       61 tgctttaaac tgcaccagcc cccaaaaatc caagggggga aaagcaaggg ggggagaaga
      121 gagcagattc cccctccccc ctctcctctc ccatccctcc cccttcctcc tccctttggg
      181 ttaacaaggc cctgctcact atatctcttt atattaaata tatatatatt agagaagagt
      241 gaggaagaga accacctccg ccccctcctt ttaaattttt tttaattttt ttttgcaagg
      301 atcccgggag ctaaggtggc tgcaaagggg agagcggtgc gagccaagtg ggggagggtg
      361 aaggaaaccc gggagaaggc tttctccagc ccccaaagtt ttgatgatga ccatgactac
      421 gatggctgac ggcttggaag gccaggactc gtccaaatcc gccttcatgg agttcgggca
      481 gcagcaacag cagcagcagc aacagcagca acagcagcag cagcagcagc agcagcagca
      541 acagcagccg ccgccgccgc caccgccgcc gccgccgcag ccgcactcgc agcagacctc
      601 cccggccatg gcaggcgcac attaccctct gcactgcttg cactcggccg ccgcggcggc
      661 ggcggcggcc ggctcccacc accaccacca ccagcaccac caccacggct cgccctacgc
      721 gtcgggcgga ggcaactcct acaaccaccg atcgctcgcc gcctacccct acatgagcca
      781 ctcgcagcac agcccttacc tccagtccta ccacaacagc agcgcggccg cccagacgcg
      841 cggggacgac acagatcaac aaaaaacgac agtgatcgaa aacggggaaa tcaggttcaa
      901 cggaaagggg aaaaagattc ggaagcctcg gaccatttat tccagcctgc agctccaggc
      961 tttaaaccac cgctttcagc agactcaata cctggccctt ccagagagag ccgaactggc
     1021 tgcttcctta ggactgacac aaacacaggt gaagatatgg tttcagaata aacgctctaa
     1081 atttaagaaa ttgctgaagc agggtagtaa cccacatgag agtgaccccc tcccgggttc
     1141 agcagccctg tcaccacgct caccagccct gcctccagtg tgggacgttt ccgcctctgc
     1201 caagggcgtc agtatgcctc ccaacagcta tatgcctggg tattcgcact ggtattcctc
     1261 accacaccag gacaccatgc agagaccaca gatgatgtga cttgtctgtg tgaacagcct
     1321 acgggagctt ctgaaggagg caaggagaat ccaggactct cttgcatctg ccaaacagcc
     1381 taagcattga gctcagagga actgtccctg tgatatctct ctctctctct ctctctctct
     1441 ctctccttcc tttccttccc tccttctatt ctccatctcc ctttctccct tccttccttt
     1501 catttttttg tttttcatcc ctgttaatct ttctttattt cttgcccatc tttccacgtt
     1561 ttctttattt cccttccctc ctgtcctgca atctcctaat ctcctgtctt cagcaacctt
     1621 aataagtaac cttgtaacac acacacacac acacacacac acacacacac acacacagag
     1681 agagagagaa agagagagag agagagagag agagagagag agagagagag agagagagag
     1741 agactggctt ttgtgccagt gttctggaaa cccatcactg caaggatatt ttccttcaca
     1801 ctctgggatc caggccctga gcctcctctt tagtactctc catccaaatg actttttttt
     1861 tacagacatt ctccaccggc agaagaatct gcacaaacat ggcagcattt ttacttgtta
     1921 atgagtttaa gacattatgt ggtgaaagac aaggattttg gactcctgaa tttttattta
     1981 ccaatgcaag actgagagga ggaggaggaa gaggaggaag aggaggggga ggaggaggag
     2041 gggaggagga agaagaagaa gaagaagaag aagaagaaga agaagaagaa gaagaaagaa
     2101 agaaagaaag aaagaaagaa agaaagaaag aaggaaggaa agaaggaaag aaggaaagaa
     2161 ggaaagaaag ggaaggaaac cccccccctc aaaatccctt ctctaaagaa agaagaaaat
     2221 ttggctgtaa aactagaaca ttgccacaaa ggaaacgctg catgtctttt caaaatgcaa
     2281 tgatcaggaa cggcaactca gctagataca aacagtaaca gcaacaagga agatgctctt
     2341 tgtgtaaccc acctccaaac cctgaactgg aatcaagaac agccaagaaa caaccaaaac
     2401 caccattcga ttgctttgac acctttccta gtgaatagtg gcattcacta agctaatagg
     2461 gacgtttata tcaaggaaca tttctgtata tattgttgaa ttttagttgt atatatactt
     2521 tgtatgtttt tgtcttcttt catatatgga gtaaaagcca caaaatgttg ggagtgtc
//
