LOCUS       XM_039100232            5775 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus divergent protein kinase domain 2B
            (Dipk2b), transcript variant X1, mRNA.
ACCESSION   XM_039100232
VERSION     XM_039100232.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100232.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5775
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5775
                     /gene="Dipk2b"
                     /note="divergent protein kinase domain 2B; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 23 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:501512"
                     /db_xref="RGD:1559731"
     CDS             161..1468
                     /gene="Dipk2b"
                     /codon_start=1
                     /product="divergent protein kinase domain 2B isoform X1"
                     /protein_id="XP_038956160.1"
                     /db_xref="GeneID:501512"
                     /db_xref="RGD:1559731"
                     /translation="MELGRPGAAATAFRQRWPAWMLLWVSTLSCSFSLPASLPPSLVP
                     RVRSSYTLGKTFLGLDKCNACIGTSICKKFFKEEIRLDNSLVSHLGLPSQDLLSYAAN
                     YSDDSKTWRPVEISRLVSKYQSEISDKRICASASGPKTCSIERILRKTGRFQKWLQAK
                     RLTPDLVQGLPSPFLHCPSQRLLDRVVRRYAEVVDAGSIFMDHFTDRDKLRLLYTLAV
                     NAHPIILQIFPGAEGWPMPKYLGSCGRFLVSTSTRPLQEFYDAPPEQAADIAYQLLGV
                     LESLRSNDLNYFFYFTHVDAGMFGIFDNGHLFIRDASALGIIDKQEASQAADRTGENE
                     DIFSCLVSGCQVQMSSCDTVPEKQNLVLVCQQLLPQLLRGKFPSPVQQEIDSALSLCS
                     KDASTNLEVFGATSLLKNILRSLRTCDPRFAYRYPDCKYNDRF"
ORIGIN      
        1 ctgctagctc ttcagcatcc tccgacagaa acctcagagg cttgaacagg gcagcaacct
       61 gaagccagct gcttttggca gcttcctttc cggtcaggcc taacctctgt gcagctctta
      121 gtgcaccact gactaccaag ggtgcagagc agagcacagg atggagcttg gacgaccagg
      181 ggctgcagct accgccttcc gtcaacgctg gccagcctgg atgctgctgt gggtctcaac
      241 cctgagctgt tctttctcct tgccagcttc tctccctcct tctctggtac cccgagtcag
      301 aagcagctac actctgggaa agacattcct cggtcttgat aaatgcaatg cctgcatcgg
      361 gacatccatt tgtaagaagt tctttaaaga agaaataagg ttggacaact cactggtttc
      421 ccacttggga ctgccttctc aggacttgct ttcttatgct gcaaattact cagatgactc
      481 taaaacctgg cgccctgtgg agatttctcg actggtcagc aagtaccaaa gtgagatctc
      541 tgacaagagg atctgtgcct ctgcatcagg accaaagacc tgcagcattg agcgcatcct
      601 tcggaaaaca ggaaggttcc agaaatggct tcaggccaag cgcctcacac ctgacctggt
      661 gcagggcctg cccagtccct tcctgcactg cccttcacaa agactcttgg accgtgtggt
      721 tcgacgatat gctgaagtag ttgatgctgg cagcatcttc atggaccact tcactgaccg
      781 tgacaagctg cgtctcctct acacactggc tgtcaatgca caccccatca tcctgcagat
      841 cttccctgga gcagagggct ggccgatgcc caagtacctg ggctcctgtg gtagattcct
      901 ggtcagtact agtaccagac cgctgcaaga attttatgat gcccctccag agcaagctgc
      961 tgacattgcc taccaactcc ttggggtcct ggaatccctg aggagcaatg atttgaacta
     1021 tttcttctac ttcacccatg ttgatgcagg catgtttggc atctttgaca atgggcatct
     1081 gttcatccgg gatgccagtg cgctaggcat catcgacaag caggaagcca gccaagcagc
     1141 tgacaggact ggagagaatg aagacatttt tagctgcctg gtttctggat gccaggtcca
     1201 gatgtcttcc tgtgacactg tccctgagaa gcaaaacctt gtgctggtgt gtcagcagct
     1261 gctgcctcaa cttctccggg gaaagtttcc ctcccctgtg caacaggaga tagactctgc
     1321 tctcagctta tgtagcaagg atgccagcac aaacctagaa gtttttgggg ccaccagtct
     1381 gctcaagaat atcttgagat ctctgagaac ctgtgatcct agatttgcct accgctaccc
     1441 agactgcaaa tataatgaca gattctgagt ggctgaagag accatctgca agctcttcca
     1501 tgtccccggt tgagttactg tcaaactgta agaagcaatt ccattttgaa tatttaagta
     1561 cattgatttc ctaagaaaca caaaaaacta gtaggagaaa ctctgacact gcatcactga
     1621 tgtcactgtg gcagagtcag aaggttggca taggaaaacc aggtgtgaac actcaatatc
     1681 tttgaacctc cattttctgt atattttacc agacttttgc aagtttaaag aaaacagaga
     1741 tataaggggc cgacaaatac cgttgtgacc tacaaagcat gttccataag catacacaga
     1801 ttgggcaagt gagaaaatcc catgtgttgg tagcctggtg gagataaaag gccaggtgaa
     1861 ggcagggctt tgggccattg gaactcaagc cccctattcc tactctcctg catctgtgag
     1921 aagagactat aaaccagaag gatgttctca cctgctccta gctcctgaac gctctgggca
     1981 cctgggtctc cttatgcatg tgcagaagtc acctcaggac atggaaaaga gccaagggta
     2041 aaaagagaag ggggacaact ggggctaatg tttttgttta agtcctctaa aagcaagggt
     2101 caaagcccaa ttatctgagg tttttagagg atatgcatac agggaaagca gaaaagggga
     2161 aactggcaaa gactgaaagg ccaactcatg aaggtaggca atgcaggaaa aacagtctga
     2221 gcttctacag gaccaagaca gagacataca ccaaaggagc cctacatctc ccatgaatag
     2281 atccatttta ttatccagct gtgttcagag ctagccagat taagctgtgg caaatgtgac
     2341 tgcagcttag ttgcaaaaac agatttcaga acacagcagc ctatgggcaa taaacagatt
     2401 ccattgttca ttgtagctgc agcctgagat caaggtctgg tctctctgca caacccgagg
     2461 agtcctagaa ctctcatcca aatgtggcct tacaagtcat tataaaaaca tttgttttca
     2521 aggtcaacca atgggataca ttttactcaa caactatttt gtcgtacctt taaagtactc
     2581 aactacgtgg cttatgggcc tctgcgcata atgttgtctg ccctccataa caatcataaa
     2641 ggtctcttag acctttacct agccttccta tgaggcctct acttgtgggg attgtttggt
     2701 ctacctcctt tctctacctc taaatcagta ccttggcagt cagaatacct gactaaacaa
     2761 acctcactgc atacacagaa aaacaggccc agggaggctg agatttgatg gaacactgct
     2821 gaaaccctcc ctaccagtcc attccccagt tcccttcctc atcagtctca gactctcatt
     2881 tcggactatt caattctatt ttcattcaca tttaaagttg aatcccaagg atcctatctt
     2941 gtgatatacc tggtggtctt tcaaagtttc cttttgacaa cagtctcaga tattgtccca
     3001 tggcaaccac agcattgaga ataacagacc aaactgatgc cacacctgag aagccagtcc
     3061 tctggctagc tgcagagaat gaacatttca tacctgcatt atcatgattt cctctcccca
     3121 ctgacttgct tgcagtatgt gctcccaggc agcctcctga ccaaagaacc cagggaaggg
     3181 gctgcagcct cgactatcca aagatgtaca tggacataag accaccccca caactctcca
     3241 gtgctcatgc cagcatcagc ctctctcaat agaaccattg catttccact gaagactgtg
     3301 agtgactttg atttagggtc cacagagttg agaaatggag ctcacaataa tcttcctctt
     3361 acctctccac cacatatctg tggggacggc aagaaggagg gaacagatcc tctagaccaa
     3421 tggtctggga ctctgaaaaa tggcccttca aaaatcatgg agctagaaag gaaacacagc
     3481 cctaaatagc tactgaatca gaacaaagaa atcttatgtc ttctttgatg gagtcgcaga
     3541 agtgatcaaa gaataaaact acctgaatat ccgcaggagg tgagtgggag acttgttttt
     3601 agtatgaact aaagcaaaca ctgcgggttt gcgcagctgt gtatatttgc agttcaggcc
     3661 aaaggaagac agataaccgt ttaggcaggg tctaacactt ttggtaatgt ctacccatct
     3721 agtggctttt tgccaggtca ggaagttaag aagttccttt tttcttacat tttgaaggga
     3781 aagcagacct tttcttgcca tcatgactga agattacaga ccccctccta gatgctatct
     3841 ccaagccaca tcctccctat tcactccctg ccatctgttg attctctacc ggtccctaca
     3901 tgtgatagac atagaacaga gtcaccagtc ctccctccac aagtgacacc tcttcctcca
     3961 gtgcaggaat gtaggtagca agcagcactg gctgtcagcc ctttgggctc tgccttggtc
     4021 actctgtggc ttcacttgat cgatacctag tcaccgggct tgggataaaa tgtgttgcct
     4081 caaccaattt gggccaatta actacacctt gtatgggtaa tttttatccc aaaactctac
     4141 ttgcatcaga ccaagatttc tgctgggcct gaatcatggt ttaactgacc ctgctcctcc
     4201 ttttcctatg aattcttttc acaggtgtaa atgagtggcc aaaatggtgg ctccacatta
     4261 ttcacatctt aatccccaga agctgtgaca gttacctata tgagaaagga catgtttaag
     4321 gatcatggga ctttccagga ttatctaggt agatgctaaa tggaagccca tgtgtctttg
     4381 taaaatggag gcagagggac ctttgagaga gaagaaccag tgatgtgaag actgacagga
     4441 tgcaactata agccaaaaaa ctccagcagt caccatgaag tggcaaggga ggaatccttc
     4501 tgccagatcc tccagaggaa ctatggcttt aataatcccc taatttctac ccagtaagcc
     4561 ccaagaattg tgagagaata caattctact gggcagcacc acctccttca cagtaatttg
     4621 ctttagcact ctaaaatcta ctaaatatca gcttccaaag agctctactt gcaacattca
     4681 cccacagtct actgtgggca aatggaaagt aatacttgag ctaagaatgt actgcactag
     4741 tagagccttt gcctagcaag caagggccct agtttccatc cccaatacag caaaatcatg
     4801 gcctggcatg gggaagtata ggatcgatcc tcatccagag ctgagggttt ccttcctcca
     4861 aagctctaga catcactgaa gaccctgctc agtcttatgt ttattcagag gctttcttga
     4921 taatccagcc accagaaacc actttctgaa ctgtgtccct aaagttctgg tccacatgtt
     4981 tgtgcctctt ttaagtttgg ttttaggaag atctgtgtct tgcttgccat ccaactcaga
     5041 gcttcccaag tctggcggtg ttgtgaaaaa ctttgtgttt acaataaaaa gggaggacta
     5101 gacacaaagc agaggctaga aaatgcttct tcagcccttc cctactttgt tcatgtgctt
     5161 tcttggctac caatcagaga gagtcacttc tcagtaacca agagacaagt gagtcaacat
     5221 gcaagagact tcaaccagaa tacaattgtt gtcagctata ttctgctgcc ggagattttg
     5281 agtgcaggca ttattttgcc agtttatatt agctgtacct tttagcctgt aagctgggct
     5341 atatgatttg taggaaccaa agaaaatgga aacatgagat ggatctattc agaaacagct
     5401 cctagttgta aacaaagcta agctgaggcc ctctactgtg taggttacag gctcaccaag
     5461 caggcaagga ctgcagagac agatcctcct tacacttgtc attaagtgtt gctaccattt
     5521 attgtgggtt tgtttgcctt ccacacagaa aggcagcaga tgtaggacaa agatgaaata
     5581 aaatgtatgc ttaaggccta tgagatcaga ctcaggaatt gtaacaacag cccagcccac
     5641 aagcctgact gtataggagt atgctggttt ccgtggtttg gtaagtatgg caattgttga
     5701 ccctgccagt gttcttgcaa catctaagcc tggacatttt ctctgaaatt aaaataaata
     5761 ctgttgttta ccttt
//
