LOCUS       NM_001014178            1560 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus divergent protein kinase domain 1B (Dipk1b),
            mRNA.
ACCESSION   NM_001014178 XM_342393
VERSION     NM_001014178.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1560)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1560)
  AUTHORS   Bonaldo,M.F., Lennon,G. and Soares,M.B.
  TITLE     Normalization and subtraction: two approaches to facilitate gene
            discovery
  JOURNAL   Genome Res 6 (9), 791-806 (1996)
   PUBMED   8889548
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AI070071.1, EV771144.1 and CA504820.1.
            
            On Oct 19, 2007 this sequence version replaced NM_001014178.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132261,
                              SAMD00132263 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-526               AI070071.1         1-526
            527-1031            EV771144.1         207-711
            1032-1560           CA504820.1         1-529               c
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p13"
     gene            1..1560
                     /gene="Dipk1b"
                     /gene_synonym="Fam69b; PIP49; RGD1308600"
                     /note="divergent protein kinase domain 1B"
                     /db_xref="GeneID:362090"
                     /db_xref="RGD:1308600"
     exon            1..141
                     /gene="Dipk1b"
                     /gene_synonym="Fam69b; PIP49; RGD1308600"
                     /inference="alignment:Splign:2.1.0"
     CDS             79..1374
                     /gene="Dipk1b"
                     /gene_synonym="Fam69b; PIP49; RGD1308600"
                     /note="pancreatitis-induced protein 49; protein FAM69B;
                     family with sequence similarity 69, member B"
                     /codon_start=1
                     /product="divergent protein kinase domain 1B"
                     /protein_id="NP_001014200.2"
                     /db_xref="GeneID:362090"
                     /db_xref="RGD:1308600"
                     /translation="MRRLRRLVHLVLLCPFSKGLQGRLPGLRVKYVLLVWLGIFVGSW
                     MVYVHYSSYSELCRGHVCQVVICDQYQKGIISGSVCQDLCELQKVEWRTCLSSAPGQQ
                     VYSGLWQDKEVTIKCGIEEALNSKAWPDAVPRRELVLFDKPTRGTSIKEFREMTLSFL
                     KANLGDLPSLPALVDQILLMADFNKDSRVSLAEAKSVWALLQRNEFLLLLSLQEKEHA
                     SRLLGYCGDLYLTESIPHGSWHGAVLLPALRPLLPSVLHRALQQWFGPAWPWRAKIAI
                     GLLEFVEELFHGSYGTFYMCETTLANVGYTATYDFKMADLQQVAPEATVRRFLQGRHC
                     EQSSDCIYGRDCRAPCDKLMRQCKGDLIQPNLAKVCELLRDYLLPGAPADLYEELGKQ
                     LRTCTTLSGLASQVEAHHSLVLSHLKTLLWREISNTNYS"
     exon            142..276
                     /gene="Dipk1b"
                     /gene_synonym="Fam69b; PIP49; RGD1308600"
                     /inference="alignment:Splign:2.1.0"
     exon            277..384
                     /gene="Dipk1b"
                     /gene_synonym="Fam69b; PIP49; RGD1308600"
                     /inference="alignment:Splign:2.1.0"
     exon            385..561
                     /gene="Dipk1b"
                     /gene_synonym="Fam69b; PIP49; RGD1308600"
                     /inference="alignment:Splign:2.1.0"
     exon            562..1543
                     /gene="Dipk1b"
                     /gene_synonym="Fam69b; PIP49; RGD1308600"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggccgctgc gggcctggcc gggctggggc tgaggccgag ccagccgcgg gcttccgcag
       61 cccgggccgg agcccatcat gcggcggctg cggcgcttgg tgcacctagt gctcctctgc
      121 cctttctcta agggcctgca gggccggctc ccaggcctca gggtcaagta tgtcttgctg
      181 gtctggctgg gcatcttcgt gggcagctgg atggtctatg tgcactactc gtcctattca
      241 gagctctgcc gagggcacgt ctgtcaggtg gtgatctgtg accagtacca gaaaggcatc
      301 atctcgggct ctgtctgcca ggacctgtgt gagctgcaga aggtggagtg gaggacctgc
      361 ctgtcttcag ccccaggcca gcaggtgtac agtgggctct ggcaagacaa agaggtgacc
      421 atcaaatgtg gcattgaaga ggcgctgaac tccaaggcct ggccagatgc agtcccgagg
      481 cgggagctgg tgctgtttga caagcccacc aggggcacct ccatcaagga gtttcgggag
      541 atgaccctca gcttcctgaa ggctaactta ggagacctgc cctccctgcc agcgctggtt
      601 gaccagatac ttcttatggc ggacttcaac aaggacagca gggtatccct ggcggaagcc
      661 aagtctgtgt gggccctgct gcagcgcaat gagttcctgc tgctgttgtc ccttcaggag
      721 aaggagcatg cttcccggct gctgggctac tgcggggacc tctaccttac cgagagcatc
      781 cctcacggct cctggcacgg ggcagtgttg ctgcctgcct tgcgccccct tctaccatct
      841 gtgctgcaca gggctctcca gcagtggttt ggacctgcat ggccatggcg tgcaaagatc
      901 gccattggcc tgttggaatt tgtagaggag ctcttccatg gttcctatgg taccttctac
      961 atgtgtgaga ctacacttgc caatgtgggg tacacagcca cctacgactt caagatggct
     1021 gacctgcagc aggtggcccc agaggccact gtgcgtcgct tccttcaggg ccgccactgt
     1081 gagcagagct ctgactgcat ctatgggcga gactgcaggg cgccatgtga caagctcatg
     1141 aggcagtgca agggtgacct catccagccc aacttggcca aggtgtgcga gctgctgagg
     1201 gactatctgc tgcccggagc ccctgcggac ctttatgagg agctgggcaa acagcttcgc
     1261 acatgcacca cactgagtgg actggccagc caggttgagg ctcaccattc tctggtgctt
     1321 agccacctta agaccttact ctggagggag atctccaaca ccaactactc ttaaggctgc
     1381 aggctccggc cacttgggct ctgctgtggg tggaactccc acaggctatc tacccccctg
     1441 caatcaagtc tccccactca tcccagctca gcaggagtcc ctgtcagagg ctggcccact
     1501 ggggccattc ctctgaatat gtaaataaat ggctcttatg tgaaaaaaaa aaaaaaaaaa
//
