LOCUS       NM_001170456            2275 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus divergent protein kinase domain 1A (Dipk1a),
            mRNA.
ACCESSION   NM_001170456 XM_001060943 XM_341181
VERSION     NM_001170456.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2275)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2275)
  AUTHORS   Bonaldo MF, Lennon G and Soares MB.
  TITLE     Normalization and subtraction: two approaches to facilitate gene
            discovery
  JOURNAL   Genome Res 6 (9), 791-806 (1996)
   PUBMED   8889548
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AI706300.1 and BC166752.1.
            
            On or before Dec 20, 2009 this sequence version replaced
            XM_001060943.1, XM_341181.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC166752.1, CA338618.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132295, SAMD00132296
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-62                AI706300.1         1-62
            63-2275             BC166752.1         14-2226
FEATURES             Location/Qualifiers
     source          1..2275
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14p22"
     gene            1..2275
                     /gene="Dipk1a"
                     /gene_synonym="Fam69a; RGD1308581"
                     /note="divergent protein kinase domain 1A"
                     /db_xref="GeneID:360906"
                     /db_xref="RGD:1308581"
     exon            1..108
                     /gene="Dipk1a"
                     /gene_synonym="Fam69a; RGD1308581"
                     /inference="alignment:Splign:2.1.0"
     CDS             55..1341
                     /gene="Dipk1a"
                     /gene_synonym="Fam69a; RGD1308581"
                     /note="family with sequence similarity 69, member A"
                     /codon_start=1
                     /product="divergent protein kinase domain 1A"
                     /protein_id="NP_001163927.1"
                     /db_xref="GeneID:360906"
                     /db_xref="RGD:1308581"
                     /translation="MARSVCAGAWLRKPHYLQARLSYMRVKYLFFSWLVVFVGSWILY
                     VQYSTYTELCRGKDCKKIICDKYKTGVIDGPACNSLCVTETLYFGKCLSTKPNNQMYL
                     GVWDNLPGVVKCQMEQAPHLDFGTDLEPRKEIVLFDKPTRGTTVQKFKEMVYSLFKAK
                     LGDQGNLSELVNLILTVADGDRDGQVSLGEAKSAWALLQLNEFLLMVILQDKEHTPKL
                     MGFCGDLYVMESVEYTSLYGISLPWVMELFIPSGFRRSMDQLFTPSWPRKAKIAIGLL
                     EFVEDVFHGPYGNFLMCDTSAKNLGYNEKYDLKMVDMRKIVPETNLKELIKDRHCESD
                     LDCVYGTDCRTSCDLSTMKCTSEVIQPNLAKACQLLKDYLLHGAPGEIREELEKQLYS
                     CIALKITANQMEMEHSLILNNLKTLLWKKISYTNDS"
     exon            109..243
                     /gene="Dipk1a"
                     /gene_synonym="Fam69a; RGD1308581"
                     /inference="alignment:Splign:2.1.0"
     exon            244..351
                     /gene="Dipk1a"
                     /gene_synonym="Fam69a; RGD1308581"
                     /inference="alignment:Splign:2.1.0"
     exon            352..528
                     /gene="Dipk1a"
                     /gene_synonym="Fam69a; RGD1308581"
                     /inference="alignment:Splign:2.1.0"
     exon            529..2262
                     /gene="Dipk1a"
                     /gene_synonym="Fam69a; RGD1308581"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggccgcgct cgggtccgcc tccgactgcg gcgcggcggg gcgatgtgag tgccatggcg
       61 aggagtgtct gcgcgggggc ctggctgagg aaaccccatt acctccaggc tcgcctgtcc
      121 tacatgcggg tgaagtacct tttcttctcc tggctggtgg tttttgttgg aagctggatc
      181 ctatatgtgc agtattcaac ctatacagag ctctgcagag ggaaggactg taagaaaatc
      241 atatgtgaca aatacaagac cggagttatt gatgggcctg catgcaacag cctctgtgtc
      301 acagaaacac tgtactttgg aaaatgtctg tccaccaagc ccaacaacca gatgtactta
      361 ggcgtctggg acaacctgcc aggtgtcgtg aagtgtcaaa tggagcaagc tccccatctt
      421 gactttggaa ctgacctgga gccaagaaag gaaatcgtgc tatttgataa accaaccagg
      481 ggaactactg tacagaaatt caaagaaatg gtgtacagtc tcttcaaggc aaaattaggt
      541 gaccaaggaa acctctctga gttggttaac ctcatcctga cagtggctga tggagacaga
      601 gatggccagg tgtccctagg agaagccaag tcagcatggg cacttctcca gttgaatgag
      661 tttctcttga tggtaatact tcaagataaa gaacataccc ccaaactaat gggattctgt
      721 ggtgatctct atgtgatgga aagtgttgaa tatacctctc tgtatggaat aagtcttcca
      781 tgggttatgg aactttttat cccatctggg ttcagaagga gcatggatca gttgttcaca
      841 ccatcatggc ccagaaaagc caagatagcc ataggacttc tagaatttgt agaggatgtt
      901 ttccatggcc cttatggaaa ctttctcatg tgtgacacca gtgccaaaaa cctaggatat
      961 aatgagaaat atgacttgaa aatggtggac atgaggaaaa ttgtgccaga gacaaaccta
     1021 aaggaactca tcaaggaccg ccactgtgag tctgacctgg actgcgtcta cggtacagac
     1081 tgcagaacta gctgtgacct gagtacaatg aagtgtactt cagaagtaat acaaccgaac
     1141 ttggcaaaag cttgtcagtt actcaaagac tacctactgc atggtgctcc aggcgaaatc
     1201 cgggaagaac tagaaaagca gctttattct tgtattgctc tcaagatcac agcaaatcaa
     1261 atggaaatgg aacactcttt gatactaaat aacctgaaga cattattgtg gaagaaaatt
     1321 tcctacacaa atgactccta gtaaaatttg gactattacc actattgaga atctacttat
     1381 gtttgagcat ttaaaagaat ggcttctgtc ccctgggcct atggagtcgt tttaaatgca
     1441 tgttatgaca gtgatggcag gtatagagcc aagagatgtc caaaactcat tcctgccttt
     1501 ttacaagttc ataagtatat tcactgttaa ctattttgac tttaaaaaaa ttaatgctgt
     1561 gaaaagcctc attgcataca gtgagtggtc tgtaggtgtt agccaatccc attgcatagt
     1621 gagtgttctg taggttgtca acctatctat cccattgctg gacattgttt gcactgaagc
     1681 tgctgtctaa acaaagacat tcatacatgg acttactaat gttttagcat ggtaaaagtt
     1741 tgcacagtaa cacaaagaat gctacacagg taaactcaaa ggactcgttt attaaagctc
     1801 agttaatata gcatggttta ctgtatactt acacatttta ccttcagatg gctccactgc
     1861 tgaatggctt tttagcttca agcatatatt ctacatgcag ttaccactgc aactgaaatt
     1921 cattatcctg aagctctgat agtgtcaaca agtgatgtac attatcttag gctggggatg
     1981 tagaccagca gtcaactgtt tacctgacac tgtaaggcag aggctacaga tgcagactgc
     2041 ctcagctgag acagaccaag gaagactgga ataaatcagc aagagttctt gctccttgtg
     2101 gttgaagggc tatttcttaa gaggcataaa tatatcacct agtacttttt cccacatgaa
     2161 cctgataggc aaggtttaat atttgaccct ttcaagttat tttcttatgt acattcgggt
     2221 ctggcatgta caataaagat gaaacaaaac aaaaaacaaa aaaaaaaaaa aaaaa
//
