LOCUS       NM_001005873            2825 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus DEAH-box helicase 40 (Dhx40), mRNA.
ACCESSION   NM_001005873 XM_213429
VERSION     NM_001005873.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2825)
  AUTHORS   Xu,J., Wu,H., Zhang,C., Cao,Y., Wang,L., Zeng,L., Ye,X., Wu,Q.,
            Dai,J., Xie,Y. and Mao,Y.
  TITLE     Identification of a novel human DDX40gene, a new member of the
            DEAH-box protein family
  JOURNAL   J Hum Genet 47 (12), 681-683 (2002)
   PUBMED   12522690
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC083821.1.
            
            On Oct 23, 2004 this sequence version replaced XM_213429.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083821.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2825
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q26"
     gene            1..2825
                     /gene="Dhx40"
                     /note="DEAH-box helicase 40"
                     /db_xref="GeneID:287595"
                     /db_xref="RGD:1359618"
     exon            1..204
                     /gene="Dhx40"
                     /inference="alignment:Splign:2.1.0"
     CDS             93..2432
                     /gene="Dhx40"
                     /EC_number="3.6.4.13"
                     /note="DEAH box protein 40; DEAH (Asp-Glu-Ala-His) box
                     polypeptide 40"
                     /codon_start=1
                     /product="probable ATP-dependent RNA helicase DHX40"
                     /protein_id="NP_001005873.1"
                     /db_xref="GeneID:287595"
                     /db_xref="RGD:1359618"
                     /translation="MSRFPAVAGRAPRRQEEGERPVELQEERPSAVRIADREEKGCTS
                     QEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIG
                     VTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILG
                     DPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKL
                     SAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDIL
                     VFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPP
                     PPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQ
                     RSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFP
                     YLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCE
                     DLLLPIAAMLSVENVFIRPVDPEYQKEAEQKHRELAAKAGGFNDFATLAVIFEQCKSS
                     GAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVLRRCLC
                     AGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYAR
                     IVCPIRYEWVRDLLPKLHELNAHDLSSVARREMRDDARRKWTNKENVKQLKDGISKEV
                     LKKMQRRNDDKSISDARARFLERKQQRIQDHSDTLKETG"
     exon            205..372
                     /gene="Dhx40"
                     /inference="alignment:Splign:2.1.0"
     exon            373..518
                     /gene="Dhx40"
                     /inference="alignment:Splign:2.1.0"
     exon            519..638
                     /gene="Dhx40"
                     /inference="alignment:Splign:2.1.0"
     exon            639..866
                     /gene="Dhx40"
                     /inference="alignment:Splign:2.1.0"
     exon            867..933
                     /gene="Dhx40"
                     /inference="alignment:Splign:2.1.0"
     exon            934..1065
                     /gene="Dhx40"
                     /inference="alignment:Splign:2.1.0"
     exon            1066..1165
                     /gene="Dhx40"
                     /inference="alignment:Splign:2.1.0"
     exon            1166..1252
                     /gene="Dhx40"
                     /inference="alignment:Splign:2.1.0"
     exon            1253..1435
                     /gene="Dhx40"
                     /inference="alignment:Splign:2.1.0"
     exon            1436..1516
                     /gene="Dhx40"
                     /inference="alignment:Splign:2.1.0"
     exon            1517..1674
                     /gene="Dhx40"
                     /inference="alignment:Splign:2.1.0"
     exon            1675..1789
                     /gene="Dhx40"
                     /inference="alignment:Splign:2.1.0"
     exon            1790..1898
                     /gene="Dhx40"
                     /inference="alignment:Splign:2.1.0"
     exon            1899..1993
                     /gene="Dhx40"
                     /inference="alignment:Splign:2.1.0"
     exon            1994..2063
                     /gene="Dhx40"
                     /inference="alignment:Splign:2.1.0"
     exon            2064..2292
                     /gene="Dhx40"
                     /inference="alignment:Splign:2.1.0"
     exon            2293..2798
                     /gene="Dhx40"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aacaccccaa cgtcatcagg gcgcgccctc gcttttcccc tcccatctcc tcggctccgt
       61 ggacgtgttc gcttcttctc cggaccgggt ctatgtcccg gtttcccgcc gtcgcgggca
      121 gggcgccaag gcggcaggag gagggcgagc ggccagtaga gctccaggaa gagcggccgt
      181 cagctgttcg catcgctgac agagaagaga aaggatgcac atcacaggag ggaggaacaa
      241 ctccaacgtt tcctattcag aaacaaagaa aaaagctcat tcaagctgtg agggacaatt
      301 cgttcctcat cgttactgga aatacaggaa gtggtaaaac aactcaactc cctaaatacc
      361 tttatgaagc agggttttca cagcatggta tgattggtgt aactcagcca cggaaagtcg
      421 ctgccatatc agttgctcag agggttgctg aagaaatgaa atgcactttg ggatctaaag
      481 ttggatacca agttcgtttt gatgattgca gctccaagga aacagcaatc aaatacatga
      541 ctgatgggtg tttactcaaa catattttgg gagatccaaa tcttaacaaa ttcagtgtca
      601 ttattttgga tgaagcccat gaaagaactt taactacaga tatcttattt ggtttactga
      661 agaagctgtt tcaggataag tctcctaaca ggaaagaaca tttaaaggtg gtggtgatgt
      721 cagcaactat ggagctagcc aagctctctg cattctttgg aaattgcccc atatttgata
      781 tacctggaag actctatcca gtcagagaga aattctgcaa tttgattggc ccacgagaca
      841 gagaaaatac tgcatatatt caagcgattg tgaaagtgac catggatatt catttgaatg
      901 aaatggctgg agacatctta gtttttctga ctggccagtt tgagatagag aagagctgtg
      961 agctgctttt tcagatggcg gagtctgttg actatgatta cgatgtgcaa gacaccacgc
     1021 tcgatggctt gttgatcctg ccctgttatg gctctatgac aacagatcaa caaaggagaa
     1081 tatttttgcc acctccacct ggaattagaa aatgtgttat atccaccaat atttctgcaa
     1141 catctttgac aatagatggg atcaggtatg tggtggatgg aggctttgtg aaacaattaa
     1201 atcacaatcc gaggttaggg ctggacatcc tggaggtggt tcctatatca aaaagtgaag
     1261 cattacagcg aagtggccga gctggcagga ctgcctcagg aaaatgcttt aggatttata
     1321 gtaaagattt ttggaaccag tgtatgcctg atcatgtgat cccagagatt aagagaacta
     1381 gtttgacatc tgtagttctg acattaaagt gccttgccat acatgatgtc ataaggtttc
     1441 catatttgga tccacctaat gagagactta ttttggaagc acttaaacag ctttaccagt
     1501 gtgatgctat tgacaggagt ggtcatgtga caagattggg tttatccatg gtggagttcc
     1561 ctcttccccc acatctgacg tgtgcagtga tcagggctgc ttctcttgat tgtgaagatt
     1621 tgctgcttcc aatagcagca atgctatctg tggaaaatgt cttcatcaga cctgttgatc
     1681 cagagtatca gaaggaagca gaacagaaac atcgggaatt ggcagcaaaa gctggaggat
     1741 ttaatgactt tgcaacttta gccgtcattt ttgaacagtg caaatcaagt ggagctccag
     1801 cttcgtggtg ccaaaagcac tggattcact ggcggtgctt attttctgcg ttccgtgtgg
     1861 aagctcaact tcgggaactg atcaggaaac tcaaacagca aagtgatttc ccaagagaga
     1921 cttttgaagg ccctaaacat gaagtactac gaagatgtct ttgtgcaggc tacttcaaaa
     1981 atgttgctcg aagatctgtt ggcagaacat tttgtacaat ggatgggcgt ggaagtccag
     2041 ttcatattca tccttcctca gcacttcatg aacaggaaac gaaacttgaa tggataattt
     2101 ttcatgaagt attagttacc accaaagtct atgcaagaat tgtgtgtcca atccgttatg
     2161 aatgggtgag agacttacta cccaagttgc atgaacttaa tgcacatgat ctgagcagtg
     2221 tggctagacg tgaaatgaga gacgatgcaa gaagaaaatg gacaaataag gaaaatgtga
     2281 aacagctaaa ggatggaata tcaaaagaag ttttaaagaa aatgcaaaga agaaatgatg
     2341 acaaatccat atcagatgcg cgggctcgtt tccttgagag aaagcaacag agaatccagg
     2401 accacagtga cacattaaag gaaacaggct aagcagtgga ttgtccaatt caggaagcag
     2461 gaaagcagcc aggaaatgtg cttctgtttt gccagttatt tcagacagta ctatcaaaag
     2521 gaagtggtca gcagctgttc atagcctgtg agccgaaagc aaataaatca cgtctcgtca
     2581 atactaacaa atgacatttt gaaagaaaag attgggttgc atagtcatag tacatgaaac
     2641 caatgaaaga tgatacaata ttttcctcac ttctgttttg ctggccttaa ctggtatcaa
     2701 acagtgtcac gagatatttt caaagaacac tgaattgtat ttaatcagcg tgtattccat
     2761 ttgcattgaa gcattaaaga ttattttcct taaatctcaa aaaaaaaaaa aaaaaaaaaa
     2821 aaaaa
//
