LOCUS       NM_001271598            1138 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus dehydrogenase/reductase 7C (Dhrs7c), transcript
            variant 1, mRNA.
ACCESSION   NM_001271598 XM_001078936 XM_003750847 XM_003750848 XM_003752337
            XM_003752338 XM_213343
VERSION     NM_001271598.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1138)
  AUTHORS   Treves,S., Thurnheer,R., Mosca,B., Vukcevic,M., Bergamelli,L.,
            Voltan,R., Oberhauser,V., Ronjat,M., Csernoch,L., Szentesi,P. and
            Zorzato,F.
  TITLE     SRP-35, a newly identified protein of the skeletal muscle
            sarcoplasmic reticulum, is a retinol dehydrogenase
  JOURNAL   Biochem J 441 (2), 731-741 (2012)
   PUBMED   21995425
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            FM120380.1, JAXUCZ010000010.1 and FN805189.1.
            
            On or before Oct 21, 2012 this sequence version replaced
            XM_003752337.1, XM_003752338.1, XM_001078936.2, XM_003750847.1,
            XM_003750848.1, XM_213343.5.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ215595.1, FQ214964.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760386, SAMEA5760475
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-162               FM120380.1         1-162
            163-306             JAXUCZ010000010.1  53011145-53011288
            307-797             FM120380.1         164-654
            798-878             FN805189.1         610-690
            879-1022            JAXUCZ010000010.1  53011145-53011288
            1023-1281           JAXUCZ010000010.1  53012023-53012281
FEATURES             Location/Qualifiers
     source          1..1138
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q24"
     gene            1..1138
                     /gene="Dhrs7c"
                     /gene_synonym="RGD1306989"
                     /note="dehydrogenase/reductase 7C"
                     /db_xref="GeneID:287411"
                     /db_xref="RGD:1306989"
     exon            1..146
                     /gene="Dhrs7c"
                     /gene_synonym="RGD1306989"
                     /inference="alignment:Splign:2.1.0"
     exon            147..306
                     /gene="Dhrs7c"
                     /gene_synonym="RGD1306989"
                     /inference="alignment:Splign:2.1.0"
     CDS             153..1088
                     /gene="Dhrs7c"
                     /gene_synonym="RGD1306989"
                     /EC_number="1.1.1.105"
                     /note="isoform 1 precursor is encoded by transcript
                     variant 1; dehydrogenase/reductase (SDR family) member 7C;
                     sarcoplasmic reticulum protein of 35 kDa; short-chain
                     dehydrogenase/reductase family 32C member 2"
                     /codon_start=1
                     /product="dehydrogenase/reductase SDR family member 7C
                     isoform 1 precursor"
                     /protein_id="NP_001258527.1"
                     /db_xref="GeneID:287411"
                     /db_xref="RGD:1306989"
                     /translation="MGIMAVLMLPLLLLGVSGLLFIYQEASRLWSKSAVQNKVVVITD
                     ALSGLGKECARVFNAGGARLVLCGKNWEGLESLYAALTSVADPSKTFTPKLVLLDLSD
                     ISCVEDVAKEVLDCYGCVDILINNASVKVKGPAHKISLELDKKIMDANYFGPITFTKV
                     LLPNMISRRTGQIVLVNNIQAKFGIPFRTAYAASKHAVMGFFDCLRAEVEEYDVVVST
                     VSPTFIRSYQAYPEQRNWGSSICKFFCRKLTYGVHPVEVAEEVMRTVRRKKQEVFMAN
                     PVPKAAVFIRTFFPELFFAVVACGVKEKLSVPEEG"
     exon            307..419
                     /gene="Dhrs7c"
                     /gene_synonym="RGD1306989"
                     /inference="alignment:Splign:2.1.0"
     exon            420..630
                     /gene="Dhrs7c"
                     /gene_synonym="RGD1306989"
                     /inference="alignment:Splign:2.1.0"
     exon            631..723
                     /gene="Dhrs7c"
                     /gene_synonym="RGD1306989"
                     /inference="alignment:Splign:2.1.0"
     exon            724..879
                     /gene="Dhrs7c"
                     /gene_synonym="RGD1306989"
                     /inference="alignment:Splign:2.1.0"
     exon            880..1138
                     /gene="Dhrs7c"
                     /gene_synonym="RGD1306989"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgagagcta taaataacca ttagagccca agcgagtggc cttaacacat ggatttcctt
       61 ccaaaaatgc agacccattt taattaaatt tgtaattagc cttaggggag ggcaggcccc
      121 ctggactcct tcagtgtgga aagactaaca agatggggat catggctgtc ctgatgctac
      181 ccctgctgct tctgggggtc agcggcctcc tcttcattta ccaggaggcc tccaggctgt
      241 ggtcgaagtc tgccgtgcag aacaaagtgg tggtcatcac cgatgccctc tcaggactgg
      301 gaaaagagtg tgctcgggtg ttcaatgcag gtggagcaag gttggtgctg tgtggaaaga
      361 actgggaggg gctggagagc ctctacgctg ccttgaccag tgtggctgac cccagcaaga
      421 cattcacccc caagctggtc ctcctggatc tctcagacat tagctgtgtt gaagatgtgg
      481 ccaaagaggt cctagactgc tatggctgtg tggacatcct catcaacaac gccagcgtga
      541 aagtgaaggg gcctgcccat aagatttctc tggagcttga caaaaagatc atggacgcca
      601 actactttgg acccatcact ttcaccaaag ttctgcttcc caacatgatc tctaggagga
      661 cgggccagat cgtgttagtg aacaacatcc aagcaaagtt tggaatcccg ttccgcacag
      721 cgtatgcagc ctccaagcat gctgtcatgg gcttcttcga ctgcctcaga gctgaggttg
      781 aggaatacga tgttgtggtc agcaccgtga gcccaacttt catccgttcc taccaggctt
      841 atcctgagca aagaaactgg gggtcatcca tttgtaaatt cttttgcaga aagctgacct
      901 atggcgtgca cccggtggag gtggctgagg aagtgatgcg cacagtgcgg aggaagaagc
      961 aagaggtgtt catggccaac cctgtcccca aggctgccgt gtttatccgc accttcttcc
     1021 ctgagttatt cttcgctgtt gtggcctgtg gagtgaagga gaagctcagt gtcccagaag
     1081 agggttgacc ttgttgtcaa aggagtcact gaaggggaat aaaggctttc cttgagaa
//
