LOCUS       XM_039100305            7789 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus diacylglycerol kinase kappa (Dgkk),
            mRNA.
ACCESSION   XM_039100305
VERSION     XM_039100305.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100305.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7789
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7789
                     /gene="Dgkk"
                     /note="diacylglycerol kinase kappa; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     ESTs, 3 Proteins, and 97% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:367745"
                     /db_xref="RGD:1561510"
     CDS             21..4178
                     /gene="Dgkk"
                     /codon_start=1
                     /product="diacylglycerol kinase kappa"
                     /protein_id="XP_038956233.1"
                     /db_xref="GeneID:367745"
                     /db_xref="RGD:1561510"
                     /translation="MDGVDSVPQGTAQPQDGEQPAESPEPPPPPPPPAPPPPSPPPPS
                     PPPPAPPPFPEPSPEPVPEPALGPCPEATPEPATERDAKSTPEPALEPDSKPDPEPDS
                     ERVPEPDPEPDSERVPEPDPEPDSERVPEPDPEPDSESAPEPDPEPDSEPAPEPDPEP
                     DSEPAPEPDPEPDSEPAPEPDPEPDSEPAPEPDPEPDSERVPEPDPEPDSERAPEPDP
                     EPDSEPAPEPDPEPDSERVPEPAPDPTLELASEPTREPTPDLDTGLALEPAMERAPES
                     CPEPTPESCPKMSPALHLLQVVPGEKSGRTSPVLLPLPSPKPPVTWSRIKKILKEGPL
                     LKNCNSFKRWKLRYCLIQGQKLHFAHHPSFAHFETIDLSQVVLAESSCRNLCHGFCVI
                     TPHRKVSLVAPSRQDMEEWINIIKTVQQGEIRQIPAAENNPFLIGMHYWYSSPNPRTQ
                     FCNVCRENIPALSRDAIICEVCKVKSHKVCALRANKDCKWNTLSITDDLLLPADEIQT
                     MPHQWVEGNIPANSQCTVCHESCGSYHRLQDFRCLWCGSTVHGACQKRFSKECSFGSC
                     RSLIVPPTALSDPRGDGQLVVSSEFWNLDWPLTCSCPLLIFINSKSGDHQGIIFLRKF
                     KQYLNPSQVFDLAKGGPEAGIAMFKNFARFRVLVCGGDGSVSWVLSTIDAYGLHDRCQ
                     MAIIPLGTGNDLARVLGWGAFWSKGKSPLEILSRVEQAHVRILDRWSVMIRETPKPVP
                     LLKGQVGMDIPRFEAAAIKNVESATTELNKILKAKYPTEMVIATRFLCSAVQDFIDDI
                     VKAWHQIKQNTTAVESVILKSDLMYDKLSVLLDLLAEDAVAASAERTATAYGSRSKPD
                     GKAFVPELDHIAKAKMELAERAQKLQQSLKLILFQVEQVLDDESRQSLSVKNFASSLF
                     LGDGDDDSDDYDQSPRHRSRCDTLSSIPSLRSEDLDNLDLEHLHVTPETIRFKERCVM
                     NNYFGIGLDAKISLEFNARREEHPEQYNSRLKNKIWYGLLGSKELLQRSYRKLEERIH
                     LECDGEAVSLPNLQGIVVLNITSYAGGVNFWGSNTATTEYEAPAIDDGKLEVVAIFGS
                     VQMAMSRIINLHHHRIAQCREVIITIDGEGGIPVQVDGEAWIQKPGLIKIKYKNTAQM
                     LMRDRDFENSMKTWESKHTEIQAVPAPHLDFQESQDSLSDGEYAQMQHLARRAENLIS
                     RLTDLSKVHQHVSVLMDSVNASATILNDVFYSQDSGNEAGAASCIPIETLSRTDAVDV
                     TFSLKGLYDDTKAFLDENLLRDAKDRAMLETALDAMNMELRRILAIGWLSQIFYPEEQ
                     ASDTYSLSRRFRVKFPKLGKKKREEGGKPKSSQRFPGFLGKFWRRRNRGKQAKDDDPP
                     TPSSSQL"
ORIGIN      
        1 acctcagacg gtgtgctgca atggacggtg tagattcggt gccccagggc actgcccagc
       61 ctcaggatgg agaacagcct gctgagtccc cagagccacc gccgccccca ccgcctccgg
      121 ccccaccgcc gccgtcccca ccgccgccgt ccccaccgcc gcctgctcct ccaccattcc
      181 ccgagccctc tccagaacca gtaccagagc ctgctctggg accctgtcca gaggcgactc
      241 cagaaccagc cacagaaaga gacgcaaaat caaccccaga gccggccctg gagccggact
      301 caaagccaga ccccgaacca gactcagagc gggtcccaga gccggacccc gaaccagact
      361 cagagcgggt cccagagccg gaccccgaac cagactcaga gcgggtccca gagccggacc
      421 ccgaaccaga ctcagagtcg gccccagagc cggaccccga accagactca gagccggccc
      481 cagagccgga ccccgaacca gactcagagc cggccccaga gccggacccc gaaccagact
      541 cagagccggc cccagagccg gaccccgaac cagactcaga gccggcccca gagccggacc
      601 ccgaaccaga ctcagagcgg gtcccagagc cggaccccga accagactca gagcgggccc
      661 cagagccgga ccccgaacca gactcagagc cggccccaga gccggacccc gaaccagact
      721 cagagcgggt cccagaacct gccccagatc caactctaga gttggcctca gaaccgacta
      781 gagagccaac cccagatctt gacacggggc tggccctaga acctgccatg gagagggccc
      841 cagagtcatg cccagaacca actccagagt cctgtccaaa gatgagtcca gcactacatc
      901 tgttgcaggt agttcctgga gagaaaagtg gaaggacatc accagtgcta ttgccattgc
      961 cgtcgcccaa accgccagta acatggtcca gaataaagaa aatactgaag gaaggacccc
     1021 tgctaaagaa ctgtaactcc ttcaagagat ggaagcttag atattgtttg attcaaggac
     1081 agaagctcca ctttgcacac catccttcgt ttgcacactt tgaaacgatt gatctgtctc
     1141 aagtcgtatt ggcagaaagt agctgtagaa atctttgcca cggtttttgt gttatcacac
     1201 cacatcgaaa agtctcttta gttgcaccca gccggcaaga tatggaagaa tggattaaca
     1261 tcataaaaac tgtccagcag ggagaaatcc gtcagatacc tgcagccgaa aacaaccctt
     1321 tccttatcgg aatgcactac tggtattcca gtcctaatcc tcggactcag ttctgcaatg
     1381 tttgtcgaga gaacattcct gccttatctc gagatgccat catttgtgaa gtatgcaagg
     1441 tgaaatctca caaagtctgt gctttgagag caaacaaaga ctgcaaatgg aacactttat
     1501 ccataactga tgaccttctt ctacccgctg atgaaataca aacaatgcca catcagtggg
     1561 tagaaggaaa tataccggcc aactctcagt gcaccgtatg tcatgagagt tgcggtagtt
     1621 atcacagact ccaggatttc cgctgcctct ggtgtggctc tacggtgcac ggggcctgcc
     1681 agaagcggtt ttccaaggaa tgttccttcg gaagttgtcg ctcattgatc gttccaccca
     1741 cagcattgag cgacccaaga ggtgatggtc agctagtagt atcgtctgaa ttctggaatc
     1801 tcgactggcc actgacttgt tcctgtccct tgctcatctt catcaactct aaaagtggag
     1861 atcatcaagg gatcatcttc ctccgaaaat tcaaacaata ccttaatccg tctcaagtat
     1921 tcgacctggc gaagggtgga cctgaagcag gtattgctat gttcaagaac tttgcccgtt
     1981 ttcgcgttct ggtttgcggt ggagatggca gcgtgagctg ggtcttatct acaattgatg
     2041 cctatggatt gcatgatcgg tgtcagatgg caatcatccc acttggaact ggtaatgatc
     2101 tcgctcgtgt ccttggctgg ggagcattct ggagtaaagg caaatcacca ctggaaattc
     2161 tcagcagagt agagcaggct cacgtgagga ttttagacag atggagtgtg atgatccgtg
     2221 agacacccaa gccagttcca ctgctgaaag gacaggtggg aatggatatc ccaagatttg
     2281 aggctgctgc catcaagaac gtagaatctg caaccactga gttgaacaaa attctgaagg
     2341 ccaagtaccc cactgagatg gtcatcgcca caagattcct gtgctcagca gtgcaagatt
     2401 ttatcgatga tattgtaaag gcctggcatc aaataaaaca gaacactaca gcagtggagt
     2461 ctgtgatttt gaaaagcgac ttaatgtatg ataaactcag tgtccttctt gatctcctgg
     2521 ctgaggatgc agtagctgcc tccgctgagc ggacagccac agcatatggc agcagaagca
     2581 aaccagatgg aaaagccttc gtccctgaac tagaccacat agcaaaggct aaaatggagt
     2641 tggctgaaag ggctcagaaa ctccagcaat ccttgaaact catcctattc caggttgaac
     2701 aagttctgga tgacgaaagc agacagagct tatcagtgaa gaactttgct tcatctttgt
     2761 tcctgggcga tggagacgat gactcagatg actatgatca gagcccaaga caccggtctc
     2821 gctgtgacac cttatcttct ataccttctc tgagaagtga agaccttgat aaccttgact
     2881 tagaacactt acatgttaca cctgaaacga tacgcttcaa agaaaggtgt gtcatgaaca
     2941 actactttgg aattggacta gacgcaaaga tttctctgga gttcaatgcc agaagagaag
     3001 aacacccaga acaatacaat agccgcctta agaacaaaat atggtatggt cttctgggaa
     3061 gcaaggaact gctacagcgc tcatacagga aactagaaga acgaatacac ctcgagtgtg
     3121 atggagaagc tgtctccttg ccaaaccttc aaggcattgt agtgctcaac attaccagct
     3181 acgctggagg tgtcaacttc tggggaagca acacagcaac cacagaatat gaggcccctg
     3241 caattgatga tgggaagcta gaggtagtgg caatctttgg ttctgtgcag atggccatgt
     3301 ctcgcatcat caacctgcat catcatcgaa ttgcccagtg ccgtgaggtg ataataacta
     3361 ttgatggtga aggtggtatc cctgtgcagg tggatgggga agcctggatt cagaaaccag
     3421 gccttatcaa gattaaatac aagaatactg cccagatgtt gatgagagat cgggactttg
     3481 agaactcaat gaaaacatgg gaatctaagc atactgaaat ccaagctgtc ccagcacccc
     3541 acctggattt ccaggaatct caagacagcc tctctgatgg ggagtatgcc cagatgcagc
     3601 acttggctcg gcgtgcagaa aacctcatta gcagactgac tgacctaagc aaggtccacc
     3661 agcatgtgtc tgtcctcatg gattctgtga atgccagtgc taccatactg aatgatgtgt
     3721 tctatagcca agacagtggc aatgaagcag gggcagcttc ctgcattccc attgagactc
     3781 taagcagaac tgatgcagta gatgttacat ttagtcttaa agggctctac gatgacacca
     3841 aagctttcct ggatgaaaac ttgttgagag acgctaagga tcgggccatg ctagaaactg
     3901 ccttggatgc catgaatatg gagttgagaa ggatactggc aattggctgg ttgagtcaaa
     3961 tcttttatcc agaggaacag gcttctgaca cttacagttt aagtcgaagg tttagagtga
     4021 aattccccaa gttggggaag aagaaacgag aagagggagg aaagccgaaa tcaagccaaa
     4081 gattccctgg ttttcttggc aagttctggc gtcgcagaaa tcgtggcaag caagcaaaag
     4141 atgatgaccc tccaacacct tcaagttctc aactatagtc cttgaaagct ggaaagagag
     4201 atcataatac agacttctac taaaaactct caagacctca ataaaggctg aactaaatta
     4261 tttcagaaca aacacgagca ccaccaagaa aggccatcca aatccttata ctaatatatt
     4321 ttccctggac ttaatcagat ctccttagag ggttacattt ttctcgttgg ccaaagattc
     4381 ttgttccgag ttgtcttgtt cagttctcct tctctttgtg tatcttgggc acctatagtg
     4441 tttattggga caggctcttt ataaatggct tgggagctat aagaatgtag aggagtgcat
     4501 ctcattagga aatattagaa tggggttatt tcactcagaa agaaactgtt gataccaagg
     4561 aataatgaat gacttactct cagaaagatg aggaaggggc agggtgttca ggcttggttg
     4621 agtttctcct ccaatccctg ccaactgaaa cttgaatttc aaaagatgac tcctagttgg
     4681 cttaagaaga tgagaacaag gtcctggagc ttgtccactc atctgttaca atgactatgt
     4741 gaaactttcc ttgtagatat aggactcttc tctctcttct ctcctctcct cgtcctcctc
     4801 ttctctcctc tcacttttct cttcttcctc cacaacctcc ttctctctaa tcttcctccc
     4861 cttcggtttc ctttcctttc cctctcccct tctcctccac tatagtactc cctctctccc
     4921 cataaactct ttgtttttcc atgtgtacac gtatgtcttt gcacatgtcc aggtggtgct
     4981 ctcatggctg ggtgggccca ctggttggaa ctcacccctc atggcaacca cacaggctcc
     5041 tgtacttttg ccttgatccc agcctgcatg tctccatgga gtgcttgcct gcattcttgc
     5101 tggatttttt aactaaatgt tttgccgctg tgctgcagta tagattatat acagagacat
     5161 aaagatgtac atatatatat atacatatat atttttaaga actgaaaata caactcgacc
     5221 tctaagtgac cctctaattt attgtgataa cccaggaatc cctcctcatc cctattatcc
     5281 cacacacata tatactctac caactgccct agttcttggt ggagcttcta atcttttggt
     5341 gcatttttta gtgtcttagc tggggtctac ttatagccca gctaattctg acacccactt
     5401 ctgagccagg ccacagaagg ggaacagaat caacaatgcc ctgcagaggg gccaagctgg
     5461 catgctgccg tttagctgtt tctcctggct ctacatcagc aactgcccaa gctctatcac
     5521 cctcctcccc aatgaaaaga tgacaaagca ttctaccctt taaatgtcaa agtcagggtc
     5581 tacctgacaa tcaaaccaca gcccatgccc ttccccaaaa gcttaatctg ggcctgcagc
     5641 tattagataa gctgttgggt cactcctcaa attaccttca aatctcctat cttacctcct
     5701 tcccccctga gtataagagg gacagtcagg gtgaccagaa agaacataga tctggggaaa
     5761 caaaggctaa gagcctctgc ttccccactg ttctgctttc aaggttgttt tcatgaaaac
     5821 ctagtaggcc taaattgctc caatctcagt caagtaaagc taacaaaagt ccagtgctca
     5881 gaaagaatgc ctctggtctg cctctcctct ctaccctcct ctataccttg ttgaacaagt
     5941 cccttcccac ttatcaagaa aattccagaa aactgccctc ttctcattgc tcagccgaac
     6001 ttagcgtgct caattacctt actcagtcca atggctggtt cactgaggtg cacaatccag
     6061 actttgatca ctggttctca actttctaga acaccaccag cctaatccac ttaaaccagc
     6121 tgcctgtgtt ccacctcttc aagggtgagg aaaagagact aacaatgggg tagtccccaa
     6181 atgtctgata gctgtgccaa acaaaaaatg tcctagctct acaactgaag aagaaattca
     6241 atgggaaaag atgacagaaa atgtttaaga ctcaaatatc agaacgcgga tgtgttgaca
     6301 atgtatgtat gtgaggggag tgtgttgttg cactctggtt ttctcttatc cctctttctt
     6361 cccaggagga ggtatcggat caaaccacca tgatcattgt tcctccttgg ttgcaggaac
     6421 gaatacctgc acagacacac tcacagaact gggatacatg ttaagttttc tcagaagagt
     6481 cttttccatg gatcatttat aaataagcaa acttaaggaa acagaaggaa atcttaggaa
     6541 actgtagcct tatcttggta gtgactaagc agggctatgt cttgtaatta tttttatcac
     6601 agtgatagtc aagtgcaata ggatcccatc tctgcttatt ttgctgaagt cctgtaggtc
     6661 tttgtgtact gtagtgctac tgttgctctg ttgtaacatc tgaattccca ctcacttgcc
     6721 ccgtcctccc acctgagtca gaatgctatt gaataacacc cataggatgg ggacttgaac
     6781 caaatgtgga gcaaacttga caagcaaatt ggcttgttaa atggtccaga tatcatctaa
     6841 attgcttagt tacatttttc ctgagaaagg aagatggcat gctaagaact tgttcacaca
     6901 tctacaaagt aaaaagggat ttttctccct ccctcccttt ctccctccct ccctaactac
     6961 ataccatccc cacctctctc ctctctcttt ctcccctacc tcctctggag ttaacttagc
     7021 ccatgagaac atgggctcct ttcaagagat cattgttgac tatttgaaga aatacagttg
     7081 ctcaggtggt gggactggac accaagtatc caccacagtt atgtacagaa atcattaaga
     7141 atcaaaactc tgcggtttgg ttgtatcttt ggtagtatcg tctgcagaat tgattgagtg
     7201 gctgattctt gaccagaagg atagtaggga aggaaaaatc tgaatagagt tagctgccac
     7261 caactacttc tggcattaat actataggag gttaccagct attctttaag gccctctgtt
     7321 acaccaaaga agggccaggg aagaagagga tattttcagt gtaagaaaag ctagccagaa
     7381 gaaacatttg agggtcaata tcatcgtccg caggatgcag tagaatttta gttgtataat
     7441 gacggaaact attaccaaag aaagcagacc ccattcacac cttttcattg gataagggac
     7501 attgattggc tttatggttt gtggagttgt gtttgtctgc taatctgtaa tacattgttg
     7561 ctttctattc tgtgttctgt gttttctcga aggccctgca aaaaagtagc agggccagga
     7621 cctggtcagg ggaggaggct ggaatagtca tggaataaca gaaaaaaatg cagaagaaaa
     7681 agatccacaa agtgtgccta ttccttttag ccctccccac aaaatggaac accagtcctc
     7741 aaaattataa ttgcttctta aaatatttta ataaatggat aaatatgga
//
