LOCUS       XM_017594330            2804 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus diacylglycerol kinase, beta (Dgkb),
            transcript variant X5, mRNA.
ACCESSION   XM_017594330
VERSION     XM_017594330.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017594330.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017594330.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2804
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2804
                     /gene="Dgkb"
                     /gene_synonym="Dagk; DGK-beta"
                     /note="diacylglycerol kinase, beta; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     3 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 32 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:54248"
                     /db_xref="RGD:2488"
     CDS             414..2804
                     /gene="Dgkb"
                     /gene_synonym="Dagk; DGK-beta"
                     /codon_start=1
                     /product="diacylglycerol kinase beta isoform X2"
                     /protein_id="XP_017449819.1"
                     /db_xref="GeneID:54248"
                     /db_xref="RGD:2488"
                     /translation="MTNQEKWAHLSPSEFSQLQKYAEYSTKKLKDVLEEFHGNGVLAK
                     YNPEGTIDFEGFKLFMKTFLEAELPDDFTAHLFMSFSNKFPHSSPNVKSKPALLSGGL
                     RMNKGAITPPRSSPANTCSPEVIHLKDIVCYLSLLERGRPEDKLEFMFRLYDTDGNGF
                     LDSSELENIIGQMMHVAEYLEWDVTELNPILHEMMEEIDYDRDGTVSLEEWIQGGMTT
                     IPLLVLLGLENNVKDDGQHVWRLKHFNKPAYCNLCLNMLIGVGKQGLCCSFCKYTVHE
                     RCVARAPPSCIKTYVKSKKNTDVMHHYWVEGNCPTKCDKCHKTVKCYQGLTGLHCVWC
                     QTTLHNKCASHLKPECDCGPLKDHILPPTTICPVVLQTMPTAGTSVPEERQSTAKKEK
                     GSSQQPNKVTDKNKMQRANSVTMDGQGLQITPIPGTHPLLVFVNPKSGGKQGERIYRK
                     FQYLLNPRQVYSLSGNGPMPGLHFFRDVPDFRVLACGGDGTVGWILDCIEKANVVKHP
                     PVAILPLGTGNDLARCLRWGGGYEGENLMKILKDIESSTEIMLDRWKFEVTPNDKDEK
                     GDPVPYSIINNYFSIGVDASIAHRFHIMREKHPEKFNSRMKNKFWYFEFGTSETFSAT
                     CKKLHESVEIECDGVQIDLINISLEGIAILNIPSMHGGSNLWGESKKKRSHRRIEKKG
                     SDKRPTLTDAKELKFASQDLSDQLLEVVGLEGAMEMGQIYTGLKSAGRRLAQCSSVVI
                     RTSKSLPMQIDGEPWMQTPCTIKITHKNQAPMLMGPPPKTGLFCSLIKRTRNRSKE"
ORIGIN      
        1 ctccaagggc tatagtagca aaagcagcct cagcagccag gcagggctgt agcttgcagc
       61 caagcagacc gccgccgcct catcaccaca cacacacaca cacacacaca cacacacaca
      121 cacacacaca cacacacaca cattgcacac acatcccgaa tcaacgcgtt ctcacacaaa
      181 ttctggacca cgacagatga gagaagagca ataggcacgg acaacagtgc tttaacaaat
      241 tattgaaatt acaaacatca acagcagttt catttcgaca gagtccatat tctggaagtc
      301 caggctattt tatcatgaaa cacaccttgt aaaatctttg aagcattgaa ttctgaccaa
      361 gatctggata aagaagccct catctgctgt gtaagaatct catcacctac gccatgacaa
      421 accaggaaaa atgggcccat ctcagcccct cagaattttc ccaacttcag aaatatgctg
      481 agtattctac aaagaaatta aaggatgttc ttgaagaatt ccatggtaat ggtgtgcttg
      541 caaagtataa tcctgaaggg accatagatt ttgaaggatt caagctgttc atgaagacct
      601 tcctggaagc tgagctccct gacgatttca ctgcccacct tttcatgtca ttcagcaaca
      661 aattccccca ttccagcccc aacgtaaaga gcaagccagc tctgctttca ggtggtttga
      721 ggatgaataa gggtgccatc acccctccac gttcttctcc agcaaatacg tgctccccgg
      781 aagtgatcca cctcaaggat attgtctgtt acctgtctct tctggaaaga ggaagacctg
      841 aggacaagct tgagtttatg tttcgcctgt atgacaccga tgggaatggc ttcctggaca
      901 gctcggaatt agaaaatatc atcggtcaga tgatgcatgt tgccgagtac ctggaatggg
      961 atgttactga acttaatccg atccttcatg aaatgatgga agaaatcgac tatgaccgtg
     1021 acggcactgt gtctctggaa gagtggattc aaggaggaat gacgactatc ccacttctag
     1081 tcttgctggg cttggaaaac aatgtgaagg atgacggaca gcatgtgtgg cgactcaagc
     1141 actttaacaa gcccgcctac tgcaatctct gcctgaacat gctgattggc gtggggaagc
     1201 agggcctctg ctgctccttc tgcaagtaca ccgtccatga gcgctgcgtg gccagagccc
     1261 cgccctcctg catcaagacc tatgtgaagt ccaagaagaa cactgacgtc atgcaccatt
     1321 attgggtcga aggcaattgc ccaaccaagt gtgataagtg ccacaagaca gtgaaatgtt
     1381 accagggcct gacggggctg cactgtgttt ggtgtcagac cacgctgcac aataaatgtg
     1441 cttctcatct gaagcctgaa tgtgactgtg gacccttgaa ggaccatatt ttgccaccca
     1501 ccacaatctg tccagttgta ttgcagacta tgcccactgc cggaacttca gttcctgagg
     1561 aaagacagtc aacagctaaa aaggaaaagg gcagctccca gcagccaaat aaagtgacag
     1621 acaagaacaa aatgcaaaga gctaactctg tcactatgga tggacaaggt ttgcagatca
     1681 ctcctattcc tggcacacat cctcttctag tttttgtcaa ccctaaaagt ggtgggaagc
     1741 aaggagaacg aatttacaga aaattccagt atcttctaaa tcctcgtcag gtttacagtc
     1801 tttctggaaa tggaccaatg ccagggttac atttttttcg cgatgtccct gacttcagag
     1861 tgttagcatg cggtggagat gggactgtgg gctggatttt ggactgcata gaaaaggcca
     1921 atgtagtcaa gcaccctcca gttgctatcc tgcctcttgg gacgggcaat gacctagcaa
     1981 gatgcctgcg gtggggtgga ggttatgaag gtgaaaatct tatgaagatc ctaaaagaca
     2041 ttgaaagcag cacagaaatc atgttggaca ggtggaagtt tgaagtcaca cccaacgaca
     2101 aagacgagaa aggagaccct gtgccttaca gcatcatcaa caactacttt tccattggcg
     2161 tggatgcttc cattgcacac agattccaca tcatgagaga aaagcacccg gagaaattca
     2221 acagccgaat gaagaacaaa ttttggtact ttgagtttgg cacatcagaa accttctcag
     2281 ccacctgcaa gaaactgcat gaatctgtag aaatagaatg tgatggagta cagatagatt
     2341 tgataaacat ctctctggaa ggaattgcaa ttttgaatat accaagcatg catggaggat
     2401 ctaatctttg gggagaatct aaaaagaaaa gaagtcatcg acggatagag aaaaaaggct
     2461 ctgacaaaag acccactctc acagatgcaa aagaactgaa gtttgcaagt caagatctga
     2521 gtgaccagct actggaggtt gttggcttgg aaggagcaat ggaaatgggc caaatataca
     2581 cggggctgaa aagtgctggc cggcggctgg ctcagtgctc ctctgtggtt atcaggacaa
     2641 gcaagtcact gccaatgcag attgatggag agccatggat gcagacccca tgcacaataa
     2701 aaattacaca caagaaccag gccccaatgc tgatgggacc tccacctaaa actggattat
     2761 tctgctccct catcaaaaga acaagaaacc gaagcaagga atga
//
