LOCUS       XM_017594329            2699 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus diacylglycerol kinase, beta (Dgkb),
            transcript variant X4, mRNA.
ACCESSION   XM_017594329
VERSION     XM_017594329.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017594329.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017594329.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2699
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2699
                     /gene="Dgkb"
                     /gene_synonym="Dagk; DGK-beta"
                     /note="diacylglycerol kinase, beta; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 32 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:54248"
                     /db_xref="RGD:2488"
     CDS             309..2699
                     /gene="Dgkb"
                     /gene_synonym="Dagk; DGK-beta"
                     /codon_start=1
                     /product="diacylglycerol kinase beta isoform X2"
                     /protein_id="XP_017449818.1"
                     /db_xref="GeneID:54248"
                     /db_xref="RGD:2488"
                     /translation="MTNQEKWAHLSPSEFSQLQKYAEYSTKKLKDVLEEFHGNGVLAK
                     YNPEGTIDFEGFKLFMKTFLEAELPDDFTAHLFMSFSNKFPHSSPNVKSKPALLSGGL
                     RMNKGAITPPRSSPANTCSPEVIHLKDIVCYLSLLERGRPEDKLEFMFRLYDTDGNGF
                     LDSSELENIIGQMMHVAEYLEWDVTELNPILHEMMEEIDYDRDGTVSLEEWIQGGMTT
                     IPLLVLLGLENNVKDDGQHVWRLKHFNKPAYCNLCLNMLIGVGKQGLCCSFCKYTVHE
                     RCVARAPPSCIKTYVKSKKNTDVMHHYWVEGNCPTKCDKCHKTVKCYQGLTGLHCVWC
                     QTTLHNKCASHLKPECDCGPLKDHILPPTTICPVVLQTMPTAGTSVPEERQSTAKKEK
                     GSSQQPNKVTDKNKMQRANSVTMDGQGLQITPIPGTHPLLVFVNPKSGGKQGERIYRK
                     FQYLLNPRQVYSLSGNGPMPGLHFFRDVPDFRVLACGGDGTVGWILDCIEKANVVKHP
                     PVAILPLGTGNDLARCLRWGGGYEGENLMKILKDIESSTEIMLDRWKFEVTPNDKDEK
                     GDPVPYSIINNYFSIGVDASIAHRFHIMREKHPEKFNSRMKNKFWYFEFGTSETFSAT
                     CKKLHESVEIECDGVQIDLINISLEGIAILNIPSMHGGSNLWGESKKKRSHRRIEKKG
                     SDKRPTLTDAKELKFASQDLSDQLLEVVGLEGAMEMGQIYTGLKSAGRRLAQCSSVVI
                     RTSKSLPMQIDGEPWMQTPCTIKITHKNQAPMLMGPPPKTGLFCSLIKRTRNRSKE"
ORIGIN      
        1 actgagagga gagcgtgtga attggaaagg atcctgagag gcggctggtc ccagttcctc
       61 tccggaaaag ctgtcgctct cgcttcagag atgcgcctag ccttcgcctg catcacgctg
      121 catgctttaa caaattattg aaattacaaa catcaacagc agtttcattt cgacagagtc
      181 catattctgg aagtccaggc tattttatca tgaaacacac cttgtaaaat ctttgaagca
      241 ttgaattctg accaagatct ggataaagaa gccctcatct gctgtgtaag aatctcatca
      301 cctacgccat gacaaaccag gaaaaatggg cccatctcag cccctcagaa ttttcccaac
      361 ttcagaaata tgctgagtat tctacaaaga aattaaagga tgttcttgaa gaattccatg
      421 gtaatggtgt gcttgcaaag tataatcctg aagggaccat agattttgaa ggattcaagc
      481 tgttcatgaa gaccttcctg gaagctgagc tccctgacga tttcactgcc caccttttca
      541 tgtcattcag caacaaattc ccccattcca gccccaacgt aaagagcaag ccagctctgc
      601 tttcaggtgg tttgaggatg aataagggtg ccatcacccc tccacgttct tctccagcaa
      661 atacgtgctc cccggaagtg atccacctca aggatattgt ctgttacctg tctcttctgg
      721 aaagaggaag acctgaggac aagcttgagt ttatgtttcg cctgtatgac accgatggga
      781 atggcttcct ggacagctcg gaattagaaa atatcatcgg tcagatgatg catgttgccg
      841 agtacctgga atgggatgtt actgaactta atccgatcct tcatgaaatg atggaagaaa
      901 tcgactatga ccgtgacggc actgtgtctc tggaagagtg gattcaagga ggaatgacga
      961 ctatcccact tctagtcttg ctgggcttgg aaaacaatgt gaaggatgac ggacagcatg
     1021 tgtggcgact caagcacttt aacaagcccg cctactgcaa tctctgcctg aacatgctga
     1081 ttggcgtggg gaagcagggc ctctgctgct ccttctgcaa gtacaccgtc catgagcgct
     1141 gcgtggccag agccccgccc tcctgcatca agacctatgt gaagtccaag aagaacactg
     1201 acgtcatgca ccattattgg gtcgaaggca attgcccaac caagtgtgat aagtgccaca
     1261 agacagtgaa atgttaccag ggcctgacgg ggctgcactg tgtttggtgt cagaccacgc
     1321 tgcacaataa atgtgcttct catctgaagc ctgaatgtga ctgtggaccc ttgaaggacc
     1381 atattttgcc acccaccaca atctgtccag ttgtattgca gactatgccc actgccggaa
     1441 cttcagttcc tgaggaaaga cagtcaacag ctaaaaagga aaagggcagc tcccagcagc
     1501 caaataaagt gacagacaag aacaaaatgc aaagagctaa ctctgtcact atggatggac
     1561 aaggtttgca gatcactcct attcctggca cacatcctct tctagttttt gtcaacccta
     1621 aaagtggtgg gaagcaagga gaacgaattt acagaaaatt ccagtatctt ctaaatcctc
     1681 gtcaggttta cagtctttct ggaaatggac caatgccagg gttacatttt tttcgcgatg
     1741 tccctgactt cagagtgtta gcatgcggtg gagatgggac tgtgggctgg attttggact
     1801 gcatagaaaa ggccaatgta gtcaagcacc ctccagttgc tatcctgcct cttgggacgg
     1861 gcaatgacct agcaagatgc ctgcggtggg gtggaggtta tgaaggtgaa aatcttatga
     1921 agatcctaaa agacattgaa agcagcacag aaatcatgtt ggacaggtgg aagtttgaag
     1981 tcacacccaa cgacaaagac gagaaaggag accctgtgcc ttacagcatc atcaacaact
     2041 acttttccat tggcgtggat gcttccattg cacacagatt ccacatcatg agagaaaagc
     2101 acccggagaa attcaacagc cgaatgaaga acaaattttg gtactttgag tttggcacat
     2161 cagaaacctt ctcagccacc tgcaagaaac tgcatgaatc tgtagaaata gaatgtgatg
     2221 gagtacagat agatttgata aacatctctc tggaaggaat tgcaattttg aatataccaa
     2281 gcatgcatgg aggatctaat ctttggggag aatctaaaaa gaaaagaagt catcgacgga
     2341 tagagaaaaa aggctctgac aaaagaccca ctctcacaga tgcaaaagaa ctgaagtttg
     2401 caagtcaaga tctgagtgac cagctactgg aggttgttgg cttggaagga gcaatggaaa
     2461 tgggccaaat atacacgggg ctgaaaagtg ctggccggcg gctggctcag tgctcctctg
     2521 tggttatcag gacaagcaag tcactgccaa tgcagattga tggagagcca tggatgcaga
     2581 ccccatgcac aataaaaatt acacacaaga accaggcccc aatgctgatg ggacctccac
     2641 ctaaaactgg attattctgc tccctcatca aaagaacaag aaaccgaagc aaggaatga
//
