LOCUS       XM_008765525            6531 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus DEP domain containing MTOR-interacting
            protein (Deptor), transcript variant X1, mRNA.
ACCESSION   XM_008765525
VERSION     XM_008765525.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 12, 2024 this sequence was replaced by
            NM_001427213.1.
            
            On Jan 21, 2021 this sequence version replaced XM_008765525.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6531
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6531
                     /gene="Deptor"
                     /note="DEP domain containing MTOR-interacting protein;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 50 ESTs, 4 long SRA reads, 7 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 97 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:314979"
                     /db_xref="RGD:1561030"
     CDS             163..1392
                     /gene="Deptor"
                     /codon_start=1
                     /product="DEP domain-containing mTOR-interacting protein
                     isoform X1"
                     /protein_id="XP_008763747.1"
                     /db_xref="GeneID:314979"
                     /db_xref="RGD:1561030"
                     /translation="MEEGSSGGSGGSDSNAGGSGGAQQRELERMAEVLVTGEQLRLRL
                     HEEKVIKDRRHHLKTYPNCFVAKELIDWLIEHKEASDRETAIKLMQKLADRGIIHHVC
                     DEHKEFKDVKLFYRFRKDDGTFPLDNEVKAFMRGQRLYEKLMSPETTLLQPREEEGVK
                     YERTFMASEFLDWLVQEGEATTRKEAEQLCHRLMEHSIIQHVSNKHPFVDSNLLYQFR
                     MNFRRRRRLMELLNEKSPSSQETHDSPFCLRKQSHDNRKSTSFMSVSPSKEIKIVSAV
                     RRSSMSSCGSSGYFSSSPTLSSSPPVLCNPKSVLKRPVTSEELLTPGAPYARKTFTIV
                     GDAVGWGFVVRGSKPCHIQAVDPSGPAAAAGMKVCQFVVSVNGLNVLNVDYRTVSNLI
                     LTGPRTIVMEVMEELEC"
ORIGIN      
        1 ttacccgcag ggattccctc accagccaat cgcgtctgag ccacgggacc gcccggaaca
       61 aagatggccg gagcggcctc ggtgagggca cactgatcca aacgccaggc gcacccgcct
      121 ccaggacagc aaaggcagag tggcaaccgc gcggtcagga gcatggagga gggcagcagc
      181 ggcggcagtg gtggcagcga cagtaacgcc ggcgggagtg gcggggcaca gcagagagag
      241 ctggaacgca tggctgaagt cctagttacg ggagagcagc tccggctgcg gctccatgaa
      301 gaaaaggtta ttaaagatag acggcaccat ctcaaaacct acccaaactg ctttgttgca
      361 aaagaactca tcgactggct cattgagcac aaggaggcct ctgaccgaga gacggcgata
      421 aaactcatgc agaaattagc tgaccggggc atcattcatc acgtgtgtga tgagcacaag
      481 gagttcaagg acgtaaagct cttctaccgc tttaggaagg acgatgggac cttcccactg
      541 gacaacgagg tgaaggcctt catgagaggg cagaggctgt atgaaaaact gatgagccct
      601 gaaactacac tcctccagcc tagggaagag gagggggtga agtatgagcg aaccttcatg
      661 gcatctgaat tcctggactg gctggttcag gaaggagaag ccacaacgag gaaagaggca
      721 gagcagcttt gccaccggct catggagcac agcatcatac agcatgtgtc taacaagcac
      781 ccatttgtgg acagcaacct cctctaccag ttcagaatga acttccgtcg gaggcgaaga
      841 ctgatggagc tgctcaatga gaagtccccg tcctctcagg agacacatga cagtcccttc
      901 tgtctgagga agcagagcca cgacaatcgg aaatctacca gctttatgtc agtcagcccc
      961 agcaaggaga tcaagattgt gtctgccgtg cggaggagca gcatgagcag ctgtggcagc
     1021 agtggctact tcagcagcag cccgacgctc agcagcagcc cccctgtgct ctgcaacccc
     1081 aaatctgtgc tgaagagacc tgtcacttct gaagaactct tgacccccgg ggctccatat
     1141 gcaaggaaga cattcacgat tgttggtgac gcagttggct ggggctttgt ggttcgagga
     1201 agtaaaccat gccacatcca ggctgtggac cccagcggac ctgcagctgc tgcagggatg
     1261 aaggtctgtc agtttgtcgt ctcggtgaat ggcctcaacg tgctgaatgt agactaccgc
     1321 accgtgagca acctgattct gacaggcccg aggacaattg tcatggaagt catggaggag
     1381 ttagaatgct gagcaagaag acatccccgc ttgtaccctg tcccagaaca acacaacagt
     1441 ggcggggcaa gactgtcagg caaatggata attgggatat tacagatctt tttctctgac
     1501 tgtacgcacc ttgactttca tacgctgttt gaatgcggaa gaaccgggta acatgtcttt
     1561 aaaaaccaaa acacagcaag gcaaggtggc tcaagtctat aatcccagca ttcaggaggg
     1621 caaggcagaa gtgctgcaag ttcaaggcca gcatcagcta actgtgaatg cctgtctcaa
     1681 aaccacacaa gggatttttc cacacaagcg catacacatc acatgcacac atgtatgcac
     1741 acgtgcacac acaccacacc acaccacaca catatacacc acacagacgc acacgtgcac
     1801 acacaggcca gtgtagacag cagtgtagga cagtagagga caatggggtg gaattgcctt
     1861 attagagccc tagtttctag ttctcagtca ttgcctctca tgtttgcagg aagttgttgt
     1921 aaaaccaact tagcaacatg gaaaaatgcc agttttagga gttcatagaa tagttactac
     1981 agggtttgca tcatgtctac tgtgtttgtg tggcaagaat aaggaacgat catctgctat
     2041 ctgggctact taagatactg aggcaggaag gtgatcactt gagcgctggt ggtgatgtca
     2101 ccctgggcaa cacagtgaca ccccacatta attaaaaaaa aataggtttt accaaaatta
     2161 gcctgagtct gttaggtaga tctagatttc acctagctta aaatgaaagc cgcatcccca
     2221 gaaatgtgac cagctgacac caatttccaa gaaggtcctt ccgcattcaa cagcttagaa
     2281 gccatcatca tcacaaagta gctttcttcc tctctctttt aagctttgga tttttgttgt
     2341 tgtgttgtgt cgtgtctgcc tttatcagcc gctttcagct caacctgttt cagttgtggc
     2401 atgaggtgaa agataaaaga gaccactgtg ccgtgggtgg caggaataga caggggatgc
     2461 caccagcaac cgcctgcctc tctttgcttt ccctgggcct gagtggtttt gccttatgag
     2521 tcagctccag ctgctttctg gtgttcattt agaacatacc ggttgtggaa gcaaagagtt
     2581 ctgtccatac cgtgtaagac tcaaagtcaa gcctctggca agactgcact ttaagggact
     2641 tggcctcagt gtgacaaaac ttgaaactcc aaatgccgtc ttagcctgga gttttacaag
     2701 ccttctcgcg tcacgggctg tgctgctcct ttagggacct gcttggcact gcaaagctcc
     2761 accttggttt agattgcttc gtcttaactt atgcatgttt ctttgatcta gaagagactt
     2821 cctttgaacc agatatggga gtgtgtttct gtaatcccac catggaagtg gaggcagaaa
     2881 gatcatgtgt tcaaaaaaga cctgagacag gaggccctgt gtcaaaacaa acatacaaac
     2941 aacaaaaatg gtcaagggag tgcatttggg gtattggtat gtagaggata ttcctcaaag
     3001 tgccaaacaa gagccatttt acctaatgca ttttgaacag agaatctact ttcttattag
     3061 gcattaacaa aataatagta ttatgcctgg gtgatttctt aatgagatgc agtcatccgg
     3121 tattggtgtt agtggaatgg attttattag tatattaatc caacttttct aactttagta
     3181 agaaaagtgt aggattttga agtgccatgg gacagccgac attgatgttg tcagttgtta
     3241 tttgagagag attctctcca cgtctgttta tcctgtgagt gaggctctgt gctgtagcat
     3301 ttattgagga tgttctccct cactcctcca cttgcccctt taagttagac attgttacct
     3361 tcatgtttca ggtagggaga ctaggtctga gcaaatgcaa tgttcttcag gttgaagcac
     3421 atgctggaac taccacgtac tatacagccc atttctccag tgctcaaacc ccttgcctat
     3481 ctgcccagac ttccttttca gagaccttat gttcagtctt tgctccaggc tatgctaaaa
     3541 ccttatggtt attttgttgt tgctcttgtt ttattggctg gagaggtcag gaccatcatc
     3601 atccatttta taaatgatca accaatcata aatcagttgg ttcatcacat gctcaaaaca
     3661 ccccaggtac taagcaggag gccttgccac atggctttaa tttctgtctg ttttgtttgt
     3721 tgatttgttt tgagacaggg tcaagctctt gatcctgcac ttgctatgtg ggatcacagg
     3781 cacacagacc catactcggt atgataacac cttagaagat gagtctcggt tgttttctgt
     3841 ctttggtatt ccttggctga caagaaagca agaatgccca tggggcatga tatccttctt
     3901 gctgctcacc tccaaatgcc ctttgccttg aaccctgaat cctatcattt ccctgtggcc
     3961 aaactcaaca ccacaggagc ccctctctgt cagggaggga gggacgaaca gttcagctgt
     4021 tttcttattt ggttcttctc attcccagtt taaagtccaa gtgctggagg gggaaacttt
     4081 ttataagaca gggtgttggt catagtgcat gcctttaatc gcagcactct ggaggcagag
     4141 tcaagcacag gtagatctct atgagtttga ggccagactg gtctacagag tgagttccag
     4201 gacatccagg gctacacaga gaaaccctat ctcaaaagca caaaaagaaa agaaaaaaga
     4261 aaaaaatgta gcatgggctg tgctcaaact aatactcctg cctcaaggaa ttcctgtggc
     4321 tcagagaccg gacactttga cttccaatta aaaaactagc actgagctgg agagagaaca
     4381 cagtgatgaa gagcttggct tgttcttcca cgggacccaa gcttgcttct tagaactacg
     4441 taacagctca cgcctagcta tggctctaat gacacaggat ctgacaccct ctgctgacct
     4501 ccttgggcac acatggtgcc caaacatagg tacatgcaaa ctatccatat gcatacaatt
     4561 aaagtgaata aatactttaa aaatacgtta ataaataaaa cgagcccaga atccaggaag
     4621 ggagaaataa acaccacctt ttatgagaag acttgcatag aatttgtgac caatttgaag
     4681 tctctaaaaa taaattcaga gaaggagcca ttattagttg aatgcagtta ttgaaggctg
     4741 tagactctcg aatcagattc ttacccagcc actagatgag agtgaggtgg acctgcaggc
     4801 tggtttataa tgaaaccctc agagcccatg ggtcctaaaa tgtcagtggg gcgtgggccg
     4861 ggtagaacac agtttaatca tttcatttga ttaatgaatg aggcataaaa caatcttggg
     4921 ctattcccag acttgtgagg cttggctgaa tcccttctga gtctcctgcc ttgcatccct
     4981 gttgcagtag attcttctgc agcacagagt catgcagcag aaacgggcct atggcaagat
     5041 gtactcaaaa caaaagtgac accaggtatc tctgaagaga agggagaatc atctgctatt
     5101 gtcatttgtt ttaaatacca cggtcttatt ctgtatgtgt tccatgttgt ccaggaactt
     5161 acagtatggc acaggctagt cttaaattca cagaaatctt cctgcttcag cctcctgagg
     5221 acttgaatga gaggaccaag ctaccatgcc tggttaaatg gagtttggtc tttatgtgga
     5281 tttgtatgtc tgtgatcttc agggaggaaa caatgattac ttattcactg cctgagataa
     5341 catttacctg cacaccttgg acacattcct tcttgttccc ttagaaaata tattttcgag
     5401 tccaacgcct taaccactcg gccatcacag ccgcagaaaa tatattttca aaaccaggcg
     5461 tgatcgctca cacctatgat cccagcattc aggaagcaga ggctagccta ggctacagag
     5521 actttgtctc aaaaacaaaa ctagacaaga aattctagac tttttttttt agatgtttgt
     5581 ttgtggtgtt tatgttttga tgatagaaag acagtctttt ttgtttcttt gttagcacag
     5641 tatgtaaatt agaaggacct cttttattaa aatgaaaact gcattatctc tttggctgtt
     5701 tctgccttct gaagtttaat tacgaatggg tgggatggcc cacagcacga agatgcatgc
     5761 tggaaaatgg aatttgagtc cacacacaga gaccctgtct aaaaactaat ttgttaggtc
     5821 taaaatctca cacttctaat cccagcactg cagaggcaga aggatcaccc catctaaggc
     5881 tagcctgggc tacatgtgat acccaaaaga cataagaatt agggagacta gttgagaagg
     5941 tagagtgagg aagatgagcc atctttgcat agatgaggtg tggctgactt cacactatca
     6001 cgtgacaggt gtctctgctt tggaaggaca gacaccaaga tcaagaacat cgctgctttc
     6061 tattcaaatt ggattcttga gtttccaaat cttctttcct atcaaacata ttgtggagat
     6121 cgtcaacttt cagggcctat tttaaaccct tggtactggc tctggctgct aagaattctg
     6181 ttttactttg actagaaatg atcagaataa ctccagagca ctgcggtgtt tctgactggc
     6241 tgaaattgat gattgacgtt aatcatgatt tcctgtcacc tgaactgcag gtgagatgta
     6301 tatttcttca ctgcagtacc aaaaggacaa atgagccgta tgccaaaatg aagttcgcca
     6361 tcaaaaatcg catatgtact gttaaacaag cttaaacgta cttaatatat agctttattt
     6421 tgaaatttgg tgagagtgat ttgctatctt taataaagct gtaccataag acttaggatg
     6481 attgtatgaa aatacaagag catgaaataa atgttacatt ttttaaagtt a
//
