LOCUS       NM_001024334            1318 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus DEPP autophagy regulator 1 (Depp1), mRNA.
ACCESSION   NM_001024334 XM_575649
VERSION     NM_001024334.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1318)
  AUTHORS   Salcher,S., Hermann,M., Kiechl-Kohlendorfer,U., Ausserlechner,M.J.
            and Obexer,P.
  TITLE     C10ORF10/DEPP-mediated ROS accumulation is a critical modulator of
            FOXO3-induced autophagy
  JOURNAL   Mol Cancer 16 (1), 95 (2017)
   PUBMED   28545464
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1318)
  AUTHORS   Salcher,S., Hagenbuchner,J., Geiger,K., Seiter,M.A., Rainer,J.,
            Kofler,R., Hermann,M., Kiechl-Kohlendorfer,U., Ausserlechner,M.J.
            and Obexer,P.
  TITLE     C10ORF10/DEPP, a transcriptional target of FOXO3, regulates
            ROS-sensitivity in human neuroblastoma
  JOURNAL   Mol Cancer 13, 224 (2014)
   PUBMED   25261981
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1318)
  AUTHORS   Shin,D. and Anderson,D.J.
  TITLE     Isolation of arterial-specific genes by subtractive hybridization
            reveals molecular heterogeneity among arterial endothelial cells
  JOURNAL   Dev Dyn 233 (4), 1589-1604 (2005)
   PUBMED   15977181
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC087112.1.
            
            On May 29, 2005 this sequence version replaced NM_001024334.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC087112.1, CK603176.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760384
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1318
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q42"
     gene            1..1318
                     /gene="Depp1"
                     /gene_synonym="Depp"
                     /note="DEPP autophagy regulator 1"
                     /db_xref="GeneID:500300"
                     /db_xref="RGD:1565700"
     exon            1..151
                     /gene="Depp1"
                     /gene_synonym="Depp"
                     /inference="alignment:Splign:2.1.0"
     exon            152..1266
                     /gene="Depp1"
                     /gene_synonym="Depp"
                     /inference="alignment:Splign:2.1.0"
     CDS             154..771
                     /gene="Depp1"
                     /gene_synonym="Depp"
                     /note="decidual protein induced by progesterone; DEPP1,
                     autophagy regulator"
                     /codon_start=1
                     /product="protein DEPP"
                     /protein_id="NP_001019505.2"
                     /db_xref="GeneID:500300"
                     /db_xref="RGD:1565700"
                     /translation="MRSRLLLPVPHLPTIRETSEELSHGAPGQEPPASPSLDDYVRCI
                     CQLAQPTSVVDKATAWSPPNRSCRPAWPREKRHQSESLEDSSPCFSSLQPTLPAPGTD
                     NPLDWLFGKSQEQQTDRRDLPNRTGSSGHWGVHRQMGKDSGRPSEARVPEYSLGRKPG
                     HRHQTSNLKSWTSRKPCQALASVSSSRPSSILGTLYLHLPVIHEL"
ORIGIN      
        1 ggagaaacca tagcacatcg tcttgattgt cctctcccca gtgaccaaga gctagagacc
       61 cggctgtgat tgtccttctc tgggtgctgc ctttggatca gacaatcttt actcttctag
      121 acttcctgcc accctgactg ctgacttaca gcaatgaggt cccgccttct gctgcctgtg
      181 ccccatttgc caacgattcg ggaaacttca gaggagctat cgcatggggc acctgggcag
      241 gagcctccag cctctcccag cctggatgac tatgtcaggt gtatttgtca gctggcacag
      301 cctacctcag tggtggacaa ggccacagcc tggagccctc ccaacagatc ctgccggcca
      361 gcctggccta gagagaagag gcaccagtcc gagtctctag aagatagttc tccttgcttc
      421 agcagcctac agcccacact gcccgctccc ggcactgaca accctctgga ctggctcttt
      481 ggaaagtcac aggaacagca gacagataga agagatctac ccaacaggac cggttcttca
      541 ggtcactggg gtgtgcacag acagatgggc aaggactcgg ggaggccttc tgaggccagg
      601 gtacctgagt actccctggg aagaaagcca gggcacaggc accagacctc caacctgaaa
      661 agctggactt ctagaaagcc ctgccaggcc ttagcatccg tctccagctc tcgccccagc
      721 agcatcctag gcactctcta tttgcatctc ccagtgattc atgaactcta acccctcccc
      781 agaaaaactc ataaagaaca tggagggtcc tgtgacctcc ccagcttctc tctcctgtgg
      841 tggacacttc ctggtctgca gggattgggc aattaattcc tggggagacc cattctttaa
      901 acggtgatga cagtctagct cccacaatgc agcttgactg gtactgtctg tttgtgactg
      961 gctggcccat gaccttgaag tgacttagtt tctcttcctt agttttatca cggttaaagt
     1021 gagtgtaggc ggaatgacta cctctcagat tgctctaata aggagatgcg ggctgtactc
     1081 tgagtggcaa gagtacacag ttcagggtgg ctgccatagt ctcacaagaa accaagggca
     1141 aaggggcaag ggaagggtct cagccccata aggcagactt tcaactgtcc taatgttgtg
     1201 acctttgaat acagttcctc atgctgtgtg atccccaacc ataaaattat ttttgttgct
     1261 acttcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//
