LOCUS       NM_001107651            2495 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus DEP domain containing 1B (Depdc1b), mRNA.
ACCESSION   NM_001107651 XM_001074048 XM_226798
VERSION     NM_001107651.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2495)
  AUTHORS   Yang Y, Liu L, Cai J, Wu J, Guan H, Zhu X, Yuan J and Li M.
  TITLE     DEPDC1B enhances migration and invasion of non-small cell lung
            cancer cells via activating Wnt/beta-catenin signaling
  JOURNAL   Biochem Biophys Res Commun 450 (1), 899-905 (2014)
   PUBMED   24971537
  REMARK    Erratum:[Biochem Biophys Res Commun. 2021 Sep 3;568:195. PMID:
            34272055]
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473955.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_226798.4, XM_001074048.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132262,
                              SAMD00132263 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2495
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q14"
     gene            1..2495
                     /gene="Depdc1b"
                     /note="DEP domain containing 1B"
                     /db_xref="GeneID:310074"
                     /db_xref="RGD:1305799"
     exon            1..130
                     /gene="Depdc1b"
                     /inference="alignment:Splign:2.1.0"
     CDS             83..1672
                     /gene="Depdc1b"
                     /codon_start=1
                     /product="DEP domain-containing protein 1B"
                     /protein_id="NP_001101121.1"
                     /db_xref="GeneID:310074"
                     /db_xref="RGD:1305799"
                     /translation="MEHRIVGPGPYRATRLWNETVELFRARMPLRKHRCRFKSYEHCF
                     TASEAVDWLHELLRNSQNFGPEVTRKQTVQLLRKFLKNHVIEDIKGKWGQEDFEDNRH
                     LYRFPPSSPLKPYPKKPLYQRDVIKFPEWNDPPPGTSQENIPVRPIVMNSEMWFKRHS
                     IAIGEVPACRLIHRRQLTEANVEEIWKSTTLSHLQRILGLDSLEEVLNTKLVNSKFII
                     HNVYSVSKQGVVILDDKSKELPHWVLSAMKCLANWPNCTDWKQPMYLGFEKDVFKTIA
                     DYYGHLKEPLLTFHLFDAFVSVLGLLPKEQMATEAFQICCLLLPPENRRKLQLLMRMM
                     ARICLNKEMPPLCDGFGTRTLMVQTFSRCILCSKDEVDLDELLAARLVTFLMDNYQEI
                     LKVPLVLQTSIEERVAHLRRVQIKYPGADMDITLSAPSFCRQISPEEFEYQRAYGSQE
                     PLAALLEEVIVDDKLSNKEKKKKLKQFQKSYPEVYQERFPTPESEALLFPEKPKAKPQ
                     LFMWALRKPFQPFQRTRSFRM"
     exon            131..396
                     /gene="Depdc1b"
                     /inference="alignment:Splign:2.1.0"
     exon            397..532
                     /gene="Depdc1b"
                     /inference="alignment:Splign:2.1.0"
     exon            533..660
                     /gene="Depdc1b"
                     /inference="alignment:Splign:2.1.0"
     exon            661..791
                     /gene="Depdc1b"
                     /inference="alignment:Splign:2.1.0"
     exon            792..839
                     /gene="Depdc1b"
                     /inference="alignment:Splign:2.1.0"
     exon            840..980
                     /gene="Depdc1b"
                     /inference="alignment:Splign:2.1.0"
     exon            981..1147
                     /gene="Depdc1b"
                     /inference="alignment:Splign:2.1.0"
     exon            1148..1324
                     /gene="Depdc1b"
                     /inference="alignment:Splign:2.1.0"
     exon            1325..1510
                     /gene="Depdc1b"
                     /inference="alignment:Splign:2.1.0"
     exon            1511..2495
                     /gene="Depdc1b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctcccggctt gtgattcaaa ctgcggcgcg gtgagttctg tggtccgcgc tggcgttgcc
       61 ccaccactgc tgcgggttgg gaatggagca ccgcatagtg ggacccgggc cgtaccgagc
      121 caccaggctg tggaacgaaa cagtggagct tttccgggcc aggatgcctt tacggaaaca
      181 tcgttgtcgg ttcaagagtt atgagcattg cttcacggca tcggaggctg tggactggct
      241 gcacgagctt ctgagaaaca gtcaaaactt tggccccgag gtaactcgca agcaaacagt
      301 ccagctgctg agaaaattcc tcaagaatca cgttatcgag gacatcaagg gaaaatgggg
      361 ccaggaggac tttgaagaca accgtcacct gtacagattt cctccttcct cacccctgaa
      421 gccatatcca aagaagcccc tgtatcaaag agatgttatt aagtttccag aatggaatga
      481 tcccccgcca ggcacttcac aggagaacat tccagtgagg ccgattgtga tgaactctga
      541 gatgtggttc aagcgccaca gtattgctat tggagaggtg cccgcgtgcc gtctcatcca
      601 ccgcagacag ctgaccgagg ccaatgtgga agagatctgg aagtctacga cgttgtcaca
      661 tttacagaga attcttggcc ttgattcctt ggaagaagtt ttaaacacaa agcttgtcaa
      721 ctccaagttc atcatccata atgtgtatag tgtcagcaag cagggagtgg tcatcttgga
      781 cgacaagtcg aaagaacttc ctcattgggt cctgtcagct atgaagtgtt tggcaaattg
      841 gcccaactgt acagattgga agcagcctat gtacttggga tttgaaaagg atgtctttaa
      901 aactattgca gattactatg gccacctgaa ggagccactg ctcacatttc acctttttga
      961 tgctttcgtc agtgtattag gtttgctgcc gaaggagcaa atggcaactg aggcgtttca
     1021 gatttgctgt ctccttctgc ctcctgaaaa caggagaaag ttacagctgc tgatgcggat
     1081 gatggcgagg atctgcttaa acaaagagat gccgccactg tgtgatggct tcggcacccg
     1141 cacactgatg gttcagacat tttcccggtg catcttgtgt tcgaaggatg aggtagattt
     1201 agatgagtta ctagctgctc ggttggtgac gtttctgatg gacaattacc aggagattct
     1261 gaaagtccct ctggtcctgc agacctccat cgaggagcgt gtggctcacc tgcgaagagt
     1321 gcagataaaa tacccaggag ctgatatgga catcaccctg tctgcacctt cattttgccg
     1381 tcaaattagt cctgaggagt ttgagtacca aagggcgtat ggctcccagg agcccctggc
     1441 agcgttgttg gaagaagtca ttgttgatga caaactctcc aacaaggaga agaagaagaa
     1501 gctgaagcag tttcagaaat cttaccctga agtctaccag gaacgatttc ctaccccaga
     1561 gagtgaagca cttctgtttc ctgagaaacc caaggccaaa ccacagctgt tcatgtgggc
     1621 actgaggaaa cctttccagc cgtttcagag aaccagaagt ttccggatgt gatgctgtga
     1681 cgaagcttga gggacctcag tggtagagac actttgagtc ggttgagact caagaacgcc
     1741 gttataaact actaaatgtg tggcttcagg tcgcccaact ccttaaatgt cgagccgttg
     1801 tcagtatttg tataaatctt gatgctgttt gcagagatgt acaaatgagt gaatgatcac
     1861 aagtcaggtg tgtagtggtg gtgcgaagag gcttgggatg cttaaaaagt ctaaaggtaa
     1921 agtgttccct tcctgtttgt cgttttctgt ggtgtgtaaa gtttttgtgc attgctcacc
     1981 catgtgtctg aaaaccaagc ctatggatac tgtacatact tgaataagaa caacactgtg
     2041 ctgttactgt ggtagcatca acccagctgc cagttgtgat ctctcctgtg taaatcccat
     2101 ggttttattg tcgtttgctt ttatttttat ttcttcttgt tttgttactg ggaaaagtcc
     2161 tcgtgttttg cactgtgata tctgtgtctt ttagtgcaga tttgcctgtt gctctttgag
     2221 tacccgtatg cggtctgggt ctgcgtgtgt gtggatgtgg aatagtatgc atctgcccac
     2281 ggtcctgtaa tttgagtctc agctaaagat ggaaggttga gcaggaagaa ttctttgggc
     2341 tcccttggac ctgtacatct aaattaagtc tttggtttta tgaaaagtat aaatgggttg
     2401 agtaagatga attactttct ttatgaatat atttttcagc ttcttcattg ttttaaaaat
     2461 acatggaatg taaataaata ctgatttttt tttat
//
