LOCUS       NM_001107714            1926 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus DENN domain containing 2D (Dennd2d), mRNA.
ACCESSION   NM_001107714 XM_001069980 XM_227570
VERSION     NM_001107714.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1926)
  AUTHORS   Yoshimura S, Gerondopoulos A, Linford A, Rigden DJ and Barr FA.
  TITLE     Family-wide characterization of the DENN domain Rab GDP-GTP
            exchange factors
  JOURNAL   J Cell Biol 191 (2), 367-381 (2010)
   PUBMED   20937701
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473952.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_227570.4, XM_001069980.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC158880.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132295, SAMD00132296
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1926
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..1926
                     /gene="Dennd2d"
                     /gene_synonym="RGD1305120"
                     /note="DENN domain containing 2D"
                     /db_xref="GeneID:310772"
                     /db_xref="RGD:1305120"
     exon            1..142
                     /gene="Dennd2d"
                     /gene_synonym="RGD1305120"
                     /inference="alignment:Splign:2.1.0"
     CDS             85..1485
                     /gene="Dennd2d"
                     /gene_synonym="RGD1305120"
                     /note="DENN/MADD domain containing 2D"
                     /codon_start=1
                     /product="DENN domain-containing protein 2D"
                     /protein_id="NP_001101184.1"
                     /db_xref="GeneID:310772"
                     /db_xref="RGD:1305120"
                     /translation="MDGLGRRLRASLRLKRGQRGQSQNNPGDAVTEPERIQEHSPPIF
                     AGGQHFFEYLLVVSLKKKHLGDDYEPTITYQFPKRENLLRGQQEEEERLLKAIPLFCF
                     PDGNEWAPLTEYPRETFSFVLTNVDGSRKIGYCRRLLPAGPGPRLPKVYCIISCIGCF
                     GLFSKILDEVEKRHQISMAVIYPFMQGLREAAFPAPGKTVTLKSFIPDSGTEFISLTR
                     PLDSHLEHVDFSALLQCLHFEQIIQIFASAVLERKIIFLAEGLSTLSQCIHAAAALLY
                     PFSWAHTYIPVVPESLLATVCCPTPFMVGVQMRFQQEVMDSPMEEVLLVNLCKGTFLL
                     SVGDEKDILPRKLQDDILDSLAQGINELKTSEQINEHVSGPFVQFFVKTVGHYASYIK
                     REASGQGHFQERSFCKAVTSKTKRRFVKKFVKTQLFSLFIQEAEKSRNPPAGYFQKKI
                     LEYEEQKKQKKSRERR"
     exon            143..318
                     /gene="Dennd2d"
                     /gene_synonym="RGD1305120"
                     /inference="alignment:Splign:2.1.0"
     exon            319..431
                     /gene="Dennd2d"
                     /gene_synonym="RGD1305120"
                     /inference="alignment:Splign:2.1.0"
     exon            432..501
                     /gene="Dennd2d"
                     /gene_synonym="RGD1305120"
                     /inference="alignment:Splign:2.1.0"
     exon            502..579
                     /gene="Dennd2d"
                     /gene_synonym="RGD1305120"
                     /inference="alignment:Splign:2.1.0"
     exon            580..720
                     /gene="Dennd2d"
                     /gene_synonym="RGD1305120"
                     /inference="alignment:Splign:2.1.0"
     exon            721..869
                     /gene="Dennd2d"
                     /gene_synonym="RGD1305120"
                     /inference="alignment:Splign:2.1.0"
     exon            870..1047
                     /gene="Dennd2d"
                     /gene_synonym="RGD1305120"
                     /inference="alignment:Splign:2.1.0"
     exon            1048..1089
                     /gene="Dennd2d"
                     /gene_synonym="RGD1305120"
                     /inference="alignment:Splign:2.1.0"
     exon            1090..1174
                     /gene="Dennd2d"
                     /gene_synonym="RGD1305120"
                     /inference="alignment:Splign:2.1.0"
     exon            1175..1414
                     /gene="Dennd2d"
                     /gene_synonym="RGD1305120"
                     /inference="alignment:Splign:2.1.0"
     exon            1415..1926
                     /gene="Dennd2d"
                     /gene_synonym="RGD1305120"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agttggaggg ccccaagaag gtcaaggatt tagggggcgg ggctggcgcg gacgtgggag
       61 ctggcgccgg gcagtggagg ggccatggat gggctcggcc gccgcctccg agccagcctg
      121 agactgaagc gcggccagcg gggacaatcc cagaacaatc ctggggatgc tgtcacagaa
      181 ccggaaagaa tccaggagca ttctccacct atctttgctg gaggccagca cttctttgaa
      241 taccttcttg ttgtttcttt aaagaaaaag catttagggg atgattatga acccacaatc
      301 acctaccagt ttcccaagag ggagaacctg ctccgaggtc agcaggagga ggaggaacgg
      361 ctgctcaaag ccatcccttt gttctgcttc cctgatggga atgagtgggc accgctcaca
      421 gagtatccca gggagacctt ctcatttgtc ctgaccaatg tggatgggag caggaagatc
      481 ggatactgca ggcgcctcct gcctgctggt cctggtcctc gccttccaaa agtatactgc
      541 atcatcagct gcatcggctg cttcggcttg ttctccaaga tactggatga agtagagaag
      601 agacatcaga tctccatggc tgtcatctac ccattcatgc aaggtctccg agaggcagcc
      661 tttcctgcac ctggaaagac agtcaccctt aagagcttca ttcctgattc aggcacggag
      721 ttcatctcat tgacacggcc cctagactcc caccttgaac atgtggactt cagtgctctg
      781 ctgcaatgcc tccattttga gcagattatt cagatctttg cctctgcagt acttgaaaga
      841 aagatcatct ttttggcaga gggtctgagt accctgtctc agtgtatcca tgctgcagct
      901 gctctgcttt acccatttag ttgggcacac acatacatcc cggtggtccc tgagagcctt
      961 ctggccactg tctgctgccc tacccccttc atggttgggg tacagatgcg attccagcag
     1021 gaggttatgg acagtcccat ggaagaggtc ctgttggtga atctttgtaa aggaaccttc
     1081 ttattatcag ttggtgatga gaaagacatc ctaccacgga aacttcagga tgacatcttg
     1141 gactctcttg ctcaaggaat aaatgagtta aagacttcag aacaaatcaa tgagcatgtt
     1201 tcaggccctt ttgtacagtt ctttgtcaag actgtgggcc actatgcctc ctatataaaa
     1261 cgggaggcca gtggacaagg ccatttccaa gaacgctcct tctgtaaggc tgttacctcc
     1321 aagaccaagc gccgatttgt gaagaagttt gtgaagacac aacttttctc cctattcatc
     1381 caggaagcag agaagagcag gaatcctcct gcaggctatt tccaaaagaa aatacttgaa
     1441 tatgaagaac agaaaaaaca gaagaaatca agagaaagac ggtgaagtaa aaactgtggt
     1501 cagcaggagt gtctacaact acagctagaa ctacaggcca gtctggactt tggcccttca
     1561 actgtgacag aatcagtgag gctctcggcc ctggaatcaa tctgtggctt tcttccaact
     1621 gataacccag tcttacttca aggtggtgtc tgaatttggg agccttggtg tcagggcttt
     1681 gaaagttctc atccaaactc atagaactgt actcaaagct gcaattttgg cagagtggac
     1741 actgtgggag ttagtagtac aggggtacag ctgttgtggg tgcttgatta gaagttgcta
     1801 gcactgctgt ctcctatgaa cctctgttat aaaatcctca atacagaaca ctgtggccca
     1861 atgacccatg tacaaaatag ggtctgatgt gaggatatga ataaagatga aaccttcttg
     1921 tttgtt
//
