LOCUS       NM_001037509             343 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus defensin beta 9 (Defb9), mRNA.
ACCESSION   NM_001037509
VERSION     NM_001037509.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 343)
  AUTHORS   Patil,A.A., Cai,Y., Sang,Y., Blecha,F. and Zhang,G.
  TITLE     Cross-species analysis of the mammalian beta-defensin gene family:
            presence of syntenic gene clusters and preferential expression in
            the male reproductive tract
  JOURNAL   Physiol Genomics 23 (1), 5-17 (2005)
   PUBMED   16033865
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000016.1.
            
            On Sep 2, 2022 this sequence version replaced NM_001037509.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY621341.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840112 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-109               JAXUCZ010000016.1  76885965-76886073   c
            110-343             JAXUCZ010000016.1  76883161-76883394   c
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16q12.5"
     gene            1..343
                     /gene="Defb9"
                     /note="defensin beta 9"
                     /db_xref="GeneID:641633"
                     /db_xref="RGD:1563138"
     exon            1..109
                     /gene="Defb9"
                     /inference="alignment:Splign:2.1.0"
     CDS             49..264
                     /gene="Defb9"
                     /note="BD-9; beta-defensin 9"
                     /codon_start=1
                     /product="beta-defensin 9 precursor"
                     /protein_id="NP_001032598.1"
                     /db_xref="GeneID:641633"
                     /db_xref="RGD:1563138"
                     /translation="MRTLCSLLLICCLLFSYDTPVVGELKHLGLKTEFEQCQRIRGYC
                     LNTYCRFPTSHVGSCYPEKRYCCKNIR"
     exon            110..343
                     /gene="Defb9"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caggagttac tgaccctctc aggagtctga gtgctcattc tgcctgccat gaggactctc
       61 tgctctctgc tgctgatatg ctgcctcctt ttctcctatg acactccagt tgttggagaa
      121 ctaaaacatc ttggattaaa aacagagttt gagcagtgcc agagaatcag agggtactgt
      181 ctcaatacct attgtcgttt tcctacctcc catgtgggta gctgttaccc ggagaagcgc
      241 tactgttgca agaacatacg atgattgaaa ggaagcacat aggagtcaag tgacatatgt
      301 gtaactgatg ttttaataaa ggaaacattt ttaagcttac cta
//
