LOCUS       NM_001037513             382 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus defensin beta 50 (Defb50), mRNA.
ACCESSION   NM_001037513
VERSION     NM_001037513.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 382)
  AUTHORS   Patil,A.A., Cai,Y., Sang,Y., Blecha,F. and Zhang,G.
  TITLE     Cross-species analysis of the mammalian beta-defensin gene family:
            presence of syntenic gene clusters and preferential expression in
            the male reproductive tract
  JOURNAL   Physiol Genomics 23 (1), 5-17 (2005)
   PUBMED   16033865
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000016.1.
            
            On Sep 2, 2022 this sequence version replaced NM_001037513.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168240.1, CB704383.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-127               JAXUCZ010000016.1  76968893-76969019   c
            128-382             JAXUCZ010000016.1  76956561-76956815   c
FEATURES             Location/Qualifiers
     source          1..382
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16q12.5"
     gene            1..382
                     /gene="Defb50"
                     /note="defensin beta 50"
                     /db_xref="GeneID:641639"
                     /db_xref="RGD:1563282"
     exon            1..127
                     /gene="Defb50"
                     /inference="alignment:Splign:2.1.0"
     CDS             70..291
                     /gene="Defb50"
                     /note="BD-50; beta-defensin 50"
                     /codon_start=1
                     /product="beta-defensin 50 precursor"
                     /protein_id="NP_001032602.1"
                     /db_xref="GeneID:641639"
                     /db_xref="RGD:1563282"
                     /translation="MKTLHLLLLISGLLSVFVKGVGSHPGTVHVRFKCIPKIAAVFGD
                     NCPFYGNVDGLCNDKKSVCCMVPVRLDNI"
     exon            128..382
                     /gene="Defb50"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcttctctct cctcagtctc ctgcgagttt ctcattctct ctgttctctg ttcgcagctt
       61 acaaacacca tgaagactct ccaccttctg ttgctgatat ctggcctcct ctccgtgttt
      121 gtcaaaggtg ttggcagtca ccctggtaca gttcatgtca ggttcaaatg tataccaaaa
      181 atagcagctg ttttcggcga caattgccct ttctatggca atgtggatgg tctctgtaat
      241 gataagaaat ctgtatgctg catggtacct gtgaggctgg ataatatata gagcactgaa
      301 gccatatgaa gaatatttta ccattgtttc aataaagtga ataaaatctg cccactcttt
      361 gaaccagatt tctgcaaaac aa
//
