LOCUS       NM_001412579             700 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus defensin beta 44 (Defb44), transcript variant 2,
            mRNA.
ACCESSION   NM_001412579
VERSION     NM_001412579.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 700)
  AUTHORS   Patil,A.A., Cai,Y., Sang,Y., Blecha,F. and Zhang,G.
  TITLE     Cross-species analysis of the mammalian beta-defensin gene family:
            presence of syntenic gene clusters and preferential expression in
            the male reproductive tract
  JOURNAL   Physiol Genomics 23 (1), 5-17 (2005)
   PUBMED   16033865
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000015.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: AY621371.1 [ECO:0000331]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            inferred exon combination        :: based on alignments, homology
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-158               JAXUCZ010000015.1  41487871-41488028
            159-318             JAXUCZ010000015.1  41488186-41488345
            319-700             JAXUCZ010000015.1  41489181-41489562
FEATURES             Location/Qualifiers
     source          1..700
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p12"
     gene            1..700
                     /gene="Defb44"
                     /note="defensin beta 44"
                     /db_xref="GeneID:641652"
                     /db_xref="RGD:1562179"
     exon            1..158
                     /gene="Defb44"
                     /inference="alignment:Splign:2.1.0"
     exon            159..318
                     /gene="Defb44"
                     /inference="alignment:Splign:2.1.0"
     CDS             264..491
                     /gene="Defb44"
                     /note="beta-defensin 44; beta-defensin 136"
                     /codon_start=1
                     /product="beta-defensin 136 precursor"
                     /protein_id="NP_001399508.1"
                     /db_xref="GeneID:641652"
                     /db_xref="RGD:1562179"
                     /translation="MDLHLLCLLLFLVTSLPEGYCVIGNSGVSFKPCTSEGGYCFFGC
                     KLGWIWITYCNNIMSCCKKDTKHSLPQTKGV"
     exon            319..700
                     /gene="Defb44"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atttagaaga ggaagctcac tggggacttt ctcacagcag tctctggtca gatgagtaag
       61 taaaactgac tgaggagtct tctccactca ctgaacaaac ccactactct tagacaaatt
      121 ctgttgacat gttaagagcc ttttgcttct tgaaccctaa gctgggatct ccctggaaga
      181 gtgagcccga atccagacca tctctataca caaggctccc caacagctgt ctgggcagtt
      241 ccagcaccac acccttcaca gctatggacc tgcatctttt atgtttactg ctcttcctgg
      301 tgacctcatt gcctgaaggt tactgtgtga tcgggaatag tggcgtatcc tttaagccat
      361 gtacttcaga aggaggctat tgcttttttg gttgtaagct aggctggata tggattactt
      421 actgtaacaa cataatgtcc tgttgtaaga aggatactaa gcattcactt cctcaaacca
      481 aaggtgtgtg acctagcttc agagctccaa ttcaaagatc atgtgagtga ttaaaagctc
      541 caaacctgtc tgtgaggacg aagagctcaa gaaacagtgt gggtgacaga taggggtgac
      601 gctggccaag tttctgttta ctggcaaaag cccagatata ttttgaagaa aaaaaaaagc
      661 attgtaataa atggcacttc atggtcttcc tcaccttaaa
//
