LOCUS       XM_039095219             576 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus defensin beta 34 (Defb34), mRNA.
ACCESSION   XM_039095219
VERSION     XM_039095219.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039095219.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..576
                     /gene="Defb34"
                     /note="defensin beta 34; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     Proteins, and 82% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:120097516"
                     /db_xref="RGD:41124527"
     CDS             1..276
                     /gene="Defb34"
                     /codon_start=1
                     /product="beta-defensin 15"
                     /protein_id="XP_038951147.1"
                     /db_xref="GeneID:120097516"
                     /db_xref="RGD:41124527"
                     /translation="MDTVLTLTALQVMKTFLFLFAVFFFLDPAKNAFFDEKCSRINGR
                     CTESCLKNEELIALCQKNLKCCVTVQPCGRDKGDELDEDSGYNRTRG"
ORIGIN      
        1 atggacaccg tgctgaccct cacagccctt caggtcatga agacattctt atttctcttt
       61 gctgttttct tctttcttga cccagccaag aatgcatttt tcgatgagaa gtgcagcagg
      121 attaatggga gatgcacaga atcttgtctg aagaatgaag aactcattgc tctctgccag
      181 aagaacctga agtgctgtgt gacagtccag ccgtgtggga gggacaaggg cgacgagttg
      241 gatgaagact cgggctacaa caggactcgg ggatgaacta gttttgtctt tctgctggaa
      301 gcagatgctg caatgaaaat aaatggctgc tttcttcatc ttgtcaactg cttctttcag
      361 aaggccaaga gcagctatct aaactggatg gtcactctgt actctttccc tatggatttg
      421 ggaggcaagc atcccaaagt tccaaggtat ttatttctcc taaaacaagg gtactagcat
      481 agcttagttt tgaccaactg gcttccacca aagggaagaa gaaaggaatt tgataatgga
      541 gaaatgagca ttagacagct cgctcgtact cataaa
//
