LOCUS       NM_001037531            1005 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus defensin beta 30 (Defb30), transcript variant 1,
            mRNA.
ACCESSION   NM_001037531
VERSION     NM_001037531.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1005)
  AUTHORS   Yenugu,S., Chintalgattu,V., Wingard,C.J., Radhakrishnan,Y.,
            French,F.S. and Hall,S.H.
  TITLE     Identification, cloning and functional characterization of novel
            beta-defensins in the rat (Rattus norvegicus)
  JOURNAL   Reprod Biol Endocrinol 4, 7 (2006)
   PUBMED   16457734
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1005)
  AUTHORS   Patil,A.A., Cai,Y., Sang,Y., Blecha,F. and Zhang,G.
  TITLE     Cross-species analysis of the mammalian beta-defensin gene family:
            presence of syntenic gene clusters and preferential expression in
            the male reproductive tract
  JOURNAL   Physiol Genomics 23 (1), 5-17 (2005)
   PUBMED   16033865
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000015.1.
            
            On Oct 7, 2022 this sequence version replaced NM_001037531.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: AY621361.1 [ECO:0000331]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-103               JAXUCZ010000015.1  41474356-41474458   c
            104-275             JAXUCZ010000015.1  41472618-41472789   c
            276-1005            JAXUCZ010000015.1  41470697-41471426   c
FEATURES             Location/Qualifiers
     source          1..1005
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p12"
     gene            1..1005
                     /gene="Defb30"
                     /note="defensin beta 30"
                     /db_xref="GeneID:641656"
                     /db_xref="RGD:1559641"
     exon            1..103
                     /gene="Defb30"
                     /inference="alignment:Splign:2.1.0"
     CDS             46..273
                     /gene="Defb30"
                     /note="BD-30; beta-defensin 30"
                     /codon_start=1
                     /product="beta-defensin 30 precursor"
                     /protein_id="NP_001032620.1"
                     /db_xref="GeneID:641656"
                     /db_xref="RGD:1559641"
                     /translation="MGSLQLILVLFVLLSDVPPVRSGVNMYIRQIYDTCWKLKGHCRN
                     VCGKKEIFHIFCGTQFLCCIERKEMPVLFVK"
     exon            104..275
                     /gene="Defb30"
                     /inference="alignment:Splign:2.1.0"
     exon            276..1005
                     /gene="Defb30"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 actttccttt gcacctcaga tgactctttg ctcgctggtt tgactatggg gagcctacag
       61 ttgatccttg tgctctttgt cttgctctcc gatgttcctc cagttagaag tggagtgaac
      121 atgtacataa gacagattta cgatacatgc tggaaactaa aagggcattg caggaatgta
      181 tgtggaaaaa aagaaatttt tcacattttt tgtggtactc aatttctgtg ctgtatagaa
      241 agaaaggaaa tgcccgttct cttcgtgaag tagctgtcac atttggtttt agtagatcca
      301 cgtgccgttt cggacccaga aatctcacct ctgattttca gattgcttgc accaatttcc
      361 attctttatg ttgttattaa atattctgga tcctagctac tgttttctat cccttaaccc
      421 cctctggggt atgcatccta atgatacatg gtaactgaat ttgtatttcc gctctgatta
      481 atagatgttt actaaatggt catgtgtctt tggttgtgac tggggcagag ctggaggtta
      541 gagcacttgc ctatgtatcc ttattcacga tgtgcttgtt cataatttga tgtaaaaact
      601 agtaaaaata aaggtcattt ggaaaatacc taaatcgaag tattgagtat gttgcagttt
      661 ataagacaca ggggactttc tattgcctag tatatctaca tcgcttagac attgctgtcg
      721 tactggggat ggagctcagt gtgtagaacg cttgggttca tttccccagc gatctcaggt
      781 atgcatcccc acacttggct tctggatttt ctattcattg tgaaaagtgg acattgaaat
      841 cgttttacta atattgtacg gtcatcaact tctcctttca gatttgccaa ttttttttgg
      901 tatacttaaa ttcttagatg caagggatat atatatatat atatatatat atatatatat
      961 atataacata tatatatatg tatatattta aaataaagga ttatt
//
