LOCUS       NM_001037368             695 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus defensin beta 29 (Defb29), mRNA.
ACCESSION   NM_001037368
VERSION     NM_001037368.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 695)
  AUTHORS   Patil,A.A., Cai,Y., Sang,Y., Blecha,F. and Zhang,G.
  TITLE     Cross-species analysis of the mammalian beta-defensin gene family:
            presence of syntenic gene clusters and preferential expression in
            the male reproductive tract
  JOURNAL   Physiol Genomics 23 (1), 5-17 (2005)
   PUBMED   16033865
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Dec 8, 2020 this sequence version replaced NM_001037368.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CK839317.1, BF566747.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMEA5760389
                                           [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-109               JAXUCZ010000003.1  161469555-161469663 c
            110-213             JAXUCZ010000003.1  161466790-161466893 c
            214-389             JAXUCZ010000003.1  161465665-161465840 c
            390-695             JAXUCZ010000003.1  161464382-161464687 c
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q41"
     gene            1..695
                     /gene="Defb29"
                     /note="defensin beta 29"
                     /db_xref="GeneID:641519"
                     /db_xref="RGD:1564030"
     exon            1..109
                     /gene="Defb29"
                     /inference="alignment:Splign:2.1.0"
     exon            110..213
                     /gene="Defb29"
                     /inference="alignment:Splign:2.1.0"
     exon            214..389
                     /gene="Defb29"
                     /inference="alignment:Splign:2.1.0"
     CDS             323..559
                     /gene="Defb29"
                     /note="BD-29; beta-defensin 29"
                     /codon_start=1
                     /product="beta-defensin 29 precursor"
                     /protein_id="NP_001032445.1"
                     /db_xref="GeneID:641519"
                     /db_xref="RGD:1564030"
                     /translation="MPVTKPYFVTVAVLLILVDKTTGGLFGLRSGKRREPWVSCELYQ
                     GSCRNACQKYEIQYLTCPKKRKCCLKFPMKITRV"
     exon            390..695
                     /gene="Defb29"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atagagcaaa cagagttctt gagagacatt ttcctggcca ggtgattaac aggcacactt
       61 ggactgtcac tcttgagagg gaacaaaggc acatgaagcc cgaggctagc atttgctaac
      121 agcattactc ttgttttgga ataacgtgca ttctcaggat gcgatgatgc ctctctggaa
      181 tttgaaacta aatttctctt atggttagtg atgttcacgg cctctaaccc tggcccattt
      241 ccaaatccga cagaggcagg gccctgctct gctgctgtga tttctatcca gtcacctgtg
      301 acacagccct ctgctctcgg gcatgccagt cacaaagcca tacttcgtga ctgtggccgt
      361 cctgctgatc ctggttgaca agaccacagg tggcctgttc ggactccgca gtggcaagag
      421 gcgagagcca tgggtttcgt gtgagcttta ccagggcagc tgcagaaatg cctgccagaa
      481 atacgagatc cagtacctga cctgccccaa gaagaggaaa tgctgcctca aatttcctat
      541 gaaaattact cgtgtctaac tctgagaggg gcctggcttg cccaccgcga atgtttcaag
      601 ctactctcag gtttgaatgt cgccagcgtc atcccttctt gaagtaattt cccccacatt
      661 ctggaatgtt cttataaaaa cgcactcctt tcttg
//
