LOCUS       NM_001037518             524 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus defensin beta 23 (Defb23), mRNA.
ACCESSION   NM_001037518
VERSION     NM_001037518.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 524)
  AUTHORS   Patil,A.A., Cai,Y., Sang,Y., Blecha,F. and Zhang,G.
  TITLE     Cross-species analysis of the mammalian beta-defensin gene family:
            presence of syntenic gene clusters and preferential expression in
            the male reproductive tract
  JOURNAL   Physiol Genomics 23 (1), 5-17 (2005)
   PUBMED   16033865
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Nov 8, 2022 this sequence version replaced NM_001037518.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY621354.1, SRR26360181.2834205.1
                                           [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-87                JAXUCZ010000003.1  161387918-161388004 c
            88-524              JAXUCZ010000003.1  161383763-161384199 c
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q41"
     gene            1..524
                     /gene="Defb23"
                     /note="defensin beta 23"
                     /db_xref="GeneID:641621"
                     /db_xref="RGD:1560097"
     exon            1..87
                     /gene="Defb23"
                     /inference="alignment:Splign:2.1.0"
     CDS             30..524
                     /gene="Defb23"
                     /note="beta-defensin 23; beta-defensin 129"
                     /codon_start=1
                     /product="beta-defensin 129 precursor"
                     /protein_id="NP_001032607.1"
                     /db_xref="GeneID:641621"
                     /db_xref="RGD:1560097"
                     /translation="MKLLFPLFASLVLQYQVESEFMVVKKCLMGFGKCKDSCLPEETQ
                     VQNCKSKKCCMGPKVTELIKSYLRHEIPHIPDDDIVEMMKMSENLTEEMQRQQALVAF
                     SQSQVAKSLLSNINSAIIPNAFPVTKRTRRHYMGNTASTERHTKQSRDSANAAPLQPR
                     PGPP"
     exon            88..524
                     /gene="Defb23"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaccctggg cttttcctag cgcccagcca tgaagctcct tttccccctc ttcgccagcc
       61 tcgtgcttca gtatcaggtg gaatcagaat ttatggtggt gaaaaagtgt ttaatgggct
      121 ttgggaaatg caaagacagc tgcctccctg aggaaaccca ggtacagaat tgcaaatcca
      181 aaaagtgctg catgggcccc aaagtgacag aactcattaa aagctacctt cgacacgaaa
      241 taccccacat acccgatgac gacatcgtgg agatgatgaa gatgagcgag aatctcacag
      301 aggagatgca aagacagcaa gccttagtgg cattctccca gagccaagtt gccaagagcc
      361 ttttgtccaa catcaactct gctatcatcc caaatgcttt ccctgtgacc aagaggacca
      421 ggagacacta catgggcaat actgcttcca ccgagaggca caccaaacaa agcagggatt
      481 ctgccaatgc tgccccactc cagccccgac ctggaccacc gtag
//
