LOCUS       NM_001033073             418 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus defensin alpha-like 1 (Defal1), mRNA.
ACCESSION   NM_001033073
VERSION     NM_001033073.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 418)
  AUTHORS   Ji,S., Yun,H., Park,G., Min,H.J. and Lee,C.W.
  TITLE     Expression and characterization of recombinant rattusin, an
            alpha-defensin-related peptide with a homodimeric scaffold formed
            by intermolecular disulfide exchanges
  JOURNAL   Protein Expr Purif 147, 17-21 (2018)
   PUBMED   29454031
  REMARK    GeneRIF: The primary sequence of linear rattusin (Defal1) is
            composed of 31 amino acids containing five cysteines with a unique
            spacing pattern.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000016.1.
            
            On Oct 7, 2022 this sequence version replaced NM_001033073.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AI639089.1, CR476138.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389, SAMN06680433
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-198               JAXUCZ010000016.1  77073954-77074151
            199-418             JAXUCZ010000016.1  77074724-77074943
FEATURES             Location/Qualifiers
     source          1..418
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16q12.5"
     gene            1..418
                     /gene="Defal1"
                     /gene_synonym="Defa-rs1"
                     /note="defensin alpha-like 1"
                     /db_xref="GeneID:613220"
                     /db_xref="RGD:1561398"
     exon            1..198
                     /gene="Defal1"
                     /gene_synonym="Defa-rs1"
                     /inference="alignment:Splign:2.1.0"
     CDS             27..290
                     /gene="Defal1"
                     /gene_synonym="Defa-rs1"
                     /note="alpha-defensin-related sequence 1; defensin
                     alpha-related sequence 1; rattusin; defensin alpha-like
                     protein 1"
                     /codon_start=1
                     /product="defensin alpha-like protein 1 precursor"
                     /protein_id="NP_001028245.1"
                     /db_xref="GeneID:613220"
                     /db_xref="RGD:1561398"
                     /translation="MKTLILLSALVLLALQVQADPIQEAEEETKTEEQPADEDQDVSV
                     SFEGPEASAVQDLRVRRTLQCSCRRVCRNTCSCIRLSRSTYAS"
     exon            199..418
                     /gene="Defal1"
                     /gene_synonym="Defa-rs1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 accaatcctc caggtgactt ccagccatga agactcttat cctcctctct gctcttgtcc
       61 tgctggcctt gcaggtccag gctgatccca ttcaagaggc agaggaagag actaaaactg
      121 aggagcagcc agcagatgag gaccaggatg tgtctgtctc ctttgaaggc ccagaagcct
      181 ctgctgttca agatttacgc gtaagaagga ccttgcagtg cagttgcaga agagtctgca
      241 gaaatacgtg tagctgcatt cggctatcaa ggtccacata tgcatcataa attctgctgc
      301 agctgaacat ggaccccaag gatgagataa ccacatgccc tggggcctca cagtcggtca
      361 ttacccttgt gcttggcctc gactgttttt ccttctccaa taaactcctt gcagataa
//
