LOCUS       NM_031800               1129 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus death effector domain-containing (Dedd), mRNA.
ACCESSION   NM_031800
VERSION     NM_031800.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1129)
  AUTHORS   Mori,M., Kitazume,M., Ose,R., Kurokawa,J., Koga,K., Osuga,Y.,
            Arai,S. and Miyazaki,T.
  TITLE     Death effector domain-containing protein (DEDD) is required for
            uterine decidualization during early pregnancy in mice
  JOURNAL   J Clin Invest 121 (1), 318-327 (2011)
   PUBMED   21135503
REFERENCE   2  (bases 1 to 1129)
  AUTHORS   Leo,C.P., Hsu,S.Y., McGee,E.A., Salanova,M. and Hsueh,A.J.
  TITLE     DEFT, a novel death effector domain-containing molecule
            predominantly expressed in testicular germ cells
  JOURNAL   Endocrinology 139 (12), 4839-4848 (1998)
   PUBMED   9832420
REFERENCE   3  (bases 1 to 1129)
  AUTHORS   Stegh,A.H., Schickling,O., Ehret,A., Scaffidi,C., Peterhansel,C.,
            Hofmann,T.G., Grummt,I., Krammer,P.H. and Peter,M.E.
  TITLE     DEDD, a novel death effector domain-containing protein, targeted to
            the nucleolus
  JOURNAL   EMBO J 17 (20), 5974-5986 (1998)
   PUBMED   9774341
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AF053362.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF053362.1, CO398364.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1129
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q24"
     gene            1..1129
                     /gene="Dedd"
                     /gene_synonym="Deft"
                     /note="death effector domain-containing"
                     /db_xref="GeneID:83631"
                     /db_xref="RGD:620050"
     exon            1..375
                     /gene="Dedd"
                     /gene_synonym="Deft"
                     /inference="alignment:Splign:2.1.0"
     CDS             51..1007
                     /gene="Dedd"
                     /gene_synonym="Deft"
                     /note="death effector domain-containing testicular
                     molecule"
                     /codon_start=1
                     /product="death effector domain-containing protein"
                     /protein_id="NP_113988.1"
                     /db_xref="GeneID:83631"
                     /db_xref="RGD:620050"
                     /translation="MAGLKRRASQVWPEERVEQEHGLYSLHRMFDIVGTHLTHRDVRV
                     LSFLFVDVIDDHERGLIRNGRDFLLALERQGRCDESNFRQVLQLLRIITRHDLLPYVT
                     LKKRRAVCPDLVDKYLEETSIRYVTPRALSDPEPRPPQPSKTVPPHYPVVCCPTSGSQ
                     MCSKRPARGRTTLGSQRKRRKSVTPDPKEKQTCDIRLRVRAEYCQHETALQGNVFSNK
                     QDPLERQFERFNQANTILKSRDLGSIICDIKFSELTYLDAFWRDYINGSLLEALKGVF
                     ITDSLKQAVGHEAIKLLVNVDEEDYELGRQKLLRNLMLQALP"
     exon            376..483
                     /gene="Dedd"
                     /gene_synonym="Deft"
                     /inference="alignment:Splign:2.1.0"
     exon            484..630
                     /gene="Dedd"
                     /gene_synonym="Deft"
                     /inference="alignment:Splign:2.1.0"
     exon            631..1129
                     /gene="Dedd"
                     /gene_synonym="Deft"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tagctgctga gcagagattc tggaaagcac tccatttctg agcctctagc atggcgggcc
       61 taaagaggcg ggcaagccag gtgtggcccg aagagcgcgt tgagcaggaa catgggctct
      121 acagcctcca ccgcatgttt gacatcgtgg gcacccacct gacacacaga gatgttcgag
      181 tgctttcctt cctttttgtt gatgttattg atgaccatga acgaggactt atccgaaatg
      241 gacgtgactt cttgttggca ctggagcgcc agggccgctg tgatgagagt aactttcgcc
      301 aggtgctgca gctgctgcgt atcatcactc gccatgactt gctgccctat gttactctca
      361 agaagagacg ggctgtgtgc cctgatcttg tagacaagta tctggaggaa acatcaattc
      421 gctatgtgac ccccagagcc ctcagcgatc cagaaccgag gcctccccag ccctctaaaa
      481 cagtgcctcc ccactatcct gtggtgtgct gccccacttc gggttctcaa atgtgtagta
      541 agcggccagc ccgagggaga accacacttg ggagtcagag aaaacgccgg aagtcagtga
      601 ctccagaccc gaaggaaaag cagacatgtg acatcaggct gcgagttcgg gcggaatact
      661 gccagcacga gactgctctg caaggcaatg tcttctctaa taagcaggac ccacttgagc
      721 gccagtttga gcgctttaac caggccaaca ctatcctcaa gtcccgggac ctgggctcca
      781 tcatctgtga catcaagttc tctgagctca cctacctcga cgcattctgg cgagactaca
      841 ttaatggctc attattagag gcactgaaag gcgttttcat cacagactct ctcaagcaag
      901 ctgtgggcca tgaagccatc aagctgctgg tgaacgtgga tgaagaagac tatgaactgg
      961 gccgacagaa actcctgagg aacttgatgc tgcaagcatt accctgacct ttccccgcct
     1021 cacctttctg gggactgttt gctccgtcac ctctggagcc gacatactgt tctggggttt
     1081 gttctctacc ctttccaacc aatcacaccg cctttttttt ttttttttt
//
