LOCUS       NP_001015005             455 aa            linear   ROD 21-MAR-2023
DEFINITION  probable ATP-dependent RNA helicase DDX47 [Rattus norvegicus].
ACCESSION   NP_001015005 XP_216291
VERSION     NP_001015005.2
DBSOURCE    REFSEQ: accession NM_001015005.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 455)
  AUTHORS   Baltz AG, Munschauer M, Schwanhausser B, Vasile A, Murakawa Y,
            Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E,
            Bonneau R, Selbach M, Dieterich C and Landthaler M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (residues 1 to 455)
  AUTHORS   Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein
            C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J and
            Hentze MW.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   3  (residues 1 to 455)
  AUTHORS   Ghosh D, Lippert D, Krokhin O, Cortens JP and Wilkins JA.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   4  (residues 1 to 455)
  AUTHORS   Sekiguchi T, Hayano T, Yanagida M, Takahashi N and Nishimoto T.
  TITLE     NOP132 is required for proper nucleolus localization of DEAD-box
            RNA helicase DDX47
  JOURNAL   Nucleic Acids Res 34 (16), 4593-4608 (2006)
   PUBMED   16963496
REFERENCE   5  (residues 1 to 455)
  AUTHORS   Lee JH, Rho SB and Chun T.
  TITLE     GABAA receptor-associated protein (GABARAP) induces apoptosis by
            interacting with DEAD (Asp-Glu-Ala-Asp/His) box polypeptide 47 (DDX
            47)
  JOURNAL   Biotechnol Lett 27 (9), 623-628 (2005)
   PUBMED   15977068
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CB761683.1 and BC091696.1.
            
            On Jun 30, 2010 this sequence version replaced NP_001015005.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC091696.1, SRR8487226.72384.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132263
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..455
                     /organism="Rattus norvegicus"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q43"
     Protein         1..455
                     /product="probable ATP-dependent RNA helicase DDX47"
                     /EC_number="3.6.4.13"
                     /note="DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
                     /calculated_mol_wt=50566
     Region          23..453
                     /region_name="SrmB"
                     /note="Superfamily II DNA and RNA helicase [Replication,
                     recombination and repair]; COG0513"
                     /db_xref="CDD:440279"
     CDS             1..455
                     /gene="Ddx47"
                     /coded_by="NM_001015005.2:13..1380"
                     /db_xref="GeneID:297685"
                     /db_xref="RGD:1310437"
ORIGIN      
        1 maadeepdsp tealqtaaee eetktfkdlg vtdvlceacd qlgwakptki qieaiplalq
       61 grdiiglaet gsgktgafal pilnalletp qrlfalvltp trelafqise qfealgssig
      121 vqcavivggi dsmsqslala kkphiviatp grlidhlent kgfnlralky lvmdeadril
      181 nmdfetevdk ilkviprdrk tflfsatmtk kvqklqraal knpvkcavss kyqtveklqq
      241 yylfipskfk dtylvyilne lagnsfmifc stcnntqrta lllrnlgfta iplhgqmsqs
      301 krlgslnkfk akarsillat dvasrgldip hvdvvvnfdi pthskdyihr vgrtaragrs
      361 gkaitfvtqy dvelfqrieh ligkklpvfp tqdeevmmlt ervseaqrfa rmelrehgek
      421 kkrkredpgd dddtegaigv rnkvaggkmk krkgr
//
