LOCUS       NM_001108858            3170 bp    mRNA    linear   ROD 26-APR-2024
DEFINITION  Rattus norvegicus DEAD-box helicase 3 (Ddx3), mRNA.
ACCESSION   NM_001108858 XM_001066609 XM_344187
VERSION     NM_001108858.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3170)
  AUTHORS   Santos,S.D., Manadas,B., Duarte,C.B. and Carvalho,A.L.
  TITLE     Proteomic analysis of an interactome for long-form AMPA receptor
            subunits
  JOURNAL   J Proteome Res 9 (4), 1670-1682 (2010)
   PUBMED   20131911
REFERENCE   2  (bases 1 to 3170)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473985.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001066609.1, XM_344187.3.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3170
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q26"
     gene            1..3170
                     /gene="Ddx3"
                     /gene_synonym="Ddx3yl; RGD1309586"
                     /note="DEAD-box helicase 3"
                     /db_xref="GeneID:364073"
                     /db_xref="RGD:1309586"
     exon            1..3170
                     /gene="Ddx3"
                     /gene_synonym="Ddx3yl; RGD1309586"
                     /inference="alignment:Splign:2.1.0"
     CDS             427..2406
                     /gene="Ddx3"
                     /gene_synonym="Ddx3yl; RGD1309586"
                     /note="Putative ATP-dependent RNA helicase Pl10-like; DEAD
                     (Asp-Glu-Ala-Asp) box helicase 3, Y-linked; DEAD-box
                     helicase 3, Y-linked like"
                     /codon_start=1
                     /product="DEAD-box helicase 3"
                     /protein_id="NP_001102328.1"
                     /db_xref="GeneID:364073"
                     /db_xref="RGD:1309586"
                     /translation="MSHVAEEDELGLDQQLAGLDLTSPDSQSGASTASKGRYIPPHLR
                     NREATKASYDKDSSRWSKDKDAYSSFGSRSDTRAKSSFFSDRGSGSRGRFDDRGRSDY
                     EGVGSRGGRSGFGKFERGGNSRWCDKADEDDWSKPLPPSERLEQELFSGGNTGINFEK
                     YDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDL
                     MACAQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTREL
                     AVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKI
                     GLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLAR
                     DFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNATGKDSLILVFVETKK
                     GADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNV
                     KHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP
                     SWLENMAFEHHYKGGSRGRSKSRFSGGFGARDYRQSSGASSSSFSSGRASNSRSGGGS
                     HGSSRGFGGGSYGGFYNSDGYGGNYSSQGVDWWGN"
ORIGIN      
        1 acgggtaatc gcggagaaga ggggagggtg aagttcaagc gaaaacagga cagcggtcga
       61 tcagtgttct ggactccggg ctgccgtgca catccaactc cattatgaac tcaatcgatc
      121 gctgttccac caccgctgta agtctgagag ggcggcgggc cctgtgaccg catcgcgggc
      181 gatggcgctc cgggtctgac caggaagtct cgcgagatta gaaatcggcg cacaggagcg
      241 ggggcagaag ccatagcgtt agctggagag aggccgtgag agggaccaga ggccggtggc
      301 gccggcagag cagactttgg ggaatcaggt cgcccaccag aagcaccgtt ctccccccag
      361 aggacctctg tggtgaaacc atagctcagc agaggtaaac cccagagttc tccgtactct
      421 tcagggatga gtcatgtggc agaggaagat gagcttgggc tggaccagca gttggctggc
      481 ctagacctga cgtctccaga cagccagagc ggggcaagca cagccagcaa agggcgctac
      541 atccctcctc acctgcggaa cagggaggct acgaaagcgt cctacgacaa agacagctca
      601 cggtggagta aagacaagga tgcctacagc agctttggtt cccgcagtga cacgagagcc
      661 aagtcgagtt tcttcagcga ccgcggaagt ggctccagag gaaggtttga tgaccgcggg
      721 cggagtgact atgagggcgt tggcagccgt ggaggtagaa gtggctttgg caaatttgag
      781 cggggcggga acagtcgctg gtgtgacaaa gcagacgagg atgactggtc taaaccactc
      841 ccaccaagcg aacgcttgga acaggagctc ttttctggag gcaatactgg gattaacttt
      901 gagaaatatg atgacattcc agttgaagcg acagggaata actgccctcc acatattgaa
      961 agtttcagcg acgtcgagat gggagaaatt attatgggaa acatcgagct cactcgttat
     1021 acacgcccaa ctccggtaca aaagcatgct attcctatta tcaaggagaa aagagacttg
     1081 atggcttgtg ctcaaacagg gtctggaaaa acggcagctt ttcttctacc tatcttgagt
     1141 cagatctata cagatggtcc aggtgaggct ttgagggcca tgaaggagaa tggaaagtat
     1201 gggcgtcgca aacagtatcc gatctccttg gttttggctc cgaccagaga attggcagtg
     1261 cagatctatg aggaggccag gaaattctca taccgatctc gagttcgacc ttgtgtggtt
     1321 tatggtggag ctgatattgg gcagcagatt cgagacttgg aacgtggctg tcacttgtta
     1381 gtagctactc caggacggct agtggacatg atggagagag gaaagatcgg actggacttc
     1441 tgcaaatact tggtgttaga cgaagcggat cgaatgttgg acatgggctt tgagcctcag
     1501 atacgaagaa tagttgaaca agacaccatg cctccaaaag gtgtccgtca cactatgatg
     1561 tttagcgcta cttttcctaa ggaaatacag atgctggctc gggatttctt ggatgaatat
     1621 atctttctgg ccgtaggaag agtcggatct acttctgaga acatcacaca gaaagttgtg
     1681 tgggtggaag aagcagacaa gcggtcattt ctgcttgacc tcctgaatgc gacaggcaag
     1741 gattccctga tattggtgtt cgtggaaacc aaaaagggtg cagattctct ggaggatttc
     1801 ttataccatg aaggatatgc ttgtaccagt attcatggag accgatctca gcgagatagg
     1861 gaagaggccc ttcaccaatt ccgatcagga aaaagtccaa ttctcgtggc tacagcagta
     1921 gcagcaagag gactggatat ttccaatgtg aaacatgtca tcaatttcga cttgcctagt
     1981 gacatcgaag aatatgtgca tcgaattggc cgtacaggtc gtgttggaaa ccttggcctt
     2041 gccacctcat tcttcaacga gaggaacata aatattacca aagatttatt ggatcttctt
     2101 gttgaagcaa aacaagaagt gccatcttgg ctagaaaaca tggcttttga acatcattac
     2161 aagggtggca gtcgtggacg gtccaagagc agatttagtg gaggatttgg tgctagagac
     2221 tatcgacaaa gtagcggtgc cagcagttcc agcttcagca gtggccgtgc tagcaacagt
     2281 cgcagtggtg gaggcagcca tggcagcagc agagggtttg gtggaggtag ctatggaggc
     2341 ttttacaata gtgatggata tggaggaaat tatagctccc agggggttga ctggtggggt
     2401 aactgagcca gctttgccat aggtcactct atcaaataca gaaaccacca catgcaactt
     2461 tgccagacta taccttgtat agcttcaaga actcacagca cattgccgcc cgtgattccc
     2521 ctctgaatac gttttaaggg agcttaaagt gagaagaaga aagggacaat ccagaagccc
     2581 cgttcagaag gtggtttaaa gacttgattg ttgtagtttg gattaactct cctcttactc
     2641 ccccatccta ctctgcattt ataacttcat gagtaaggat catttgtttg ttaatgtgct
     2701 gtaccttact ttagacaact tttattctga tgtcccgttg gctcagtaat gcttaagata
     2761 tcaaattttt ttaacaaaat aaattttctg aacttgggct aagaaaacga agaaagggac
     2821 aggtatttat tatgggaatg ggactgtcct taagtattcc ttaggtactc tgagaaaggc
     2881 aggggtgagg cccaggatga aggatggcat ttcggaaatg tataacagcc caggggttca
     2941 agagtagtta tggttgaaat acctgtttaa gtgtacagtt ctagttgcta aacttagcac
     3001 gaccaggaaa tgcaatggca tttttatttt cctgtgtact ttaatccttt gttagtagtc
     3061 atcctcagtg aaatgtagtg gcagcctttg ggagtcacta gtcagtattc atgcttagta
     3121 ccgtgacata gaggatctaa acagctccaa ataaatggta tcaagaaacc
//
