LOCUS       NP_001102368             540 aa            linear   ROD 21-MAR-2023
DEFINITION  probable ATP-dependent RNA helicase DDX28 [Rattus norvegicus].
ACCESSION   NP_001102368 XP_001076081 XP_344763
VERSION     NP_001102368.1
DBSOURCE    REFSEQ: accession NM_001108898.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 540)
  AUTHORS   Antonicka H and Shoubridge EA.
  TITLE     Mitochondrial RNA Granules Are Centers for Posttranscriptional RNA
            Processing and Ribosome Biogenesis
  JOURNAL   Cell Rep 10 (6), 920-932 (2015)
   PUBMED   25683715
REFERENCE   2  (residues 1 to 540)
  AUTHORS   Baltz AG, Munschauer M, Schwanhausser B, Vasile A, Murakawa Y,
            Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E,
            Bonneau R, Selbach M, Dieterich C and Landthaler M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   3  (residues 1 to 540)
  AUTHORS   Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein
            C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J and
            Hentze MW.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   4  (residues 1 to 540)
  AUTHORS   Bogenhagen DF, Rousseau D and Burke S.
  TITLE     The layered structure of human mitochondrial DNA nucleoids
  JOURNAL   J Biol Chem 283 (6), 3665-3675 (2008)
   PUBMED   18063578
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473972.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XP_001076081.1, XP_344763.2.
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..540
                     /organism="Rattus norvegicus"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q12"
     Protein         1..540
                     /product="probable ATP-dependent RNA helicase DDX28"
                     /EC_number="3.6.4.13"
                     /note="DEAD (Asp-Glu-Ala-Asp) box polypeptide 28"
                     /calculated_mol_wt=59809
     Region          145..371
                     /region_name="DEAD-like_helicase_N"
                     /note="N-terminal helicase domain of the DEAD-box helicase
                     superfamily; cl28899"
                     /db_xref="CDD:475120"
     Site            order(174..180,286)
                     /site_type="other"
                     /note="putative ATP binding site [chemical binding]"
                     /db_xref="CDD:350670"
     Region          365..503
                     /region_name="SF2_C_DEAD"
                     /note="C-terminal helicase domain of the DEAD box
                     helicases; cd18787"
                     /db_xref="CDD:350174"
     Site            order(460,462,487,490..491)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350174"
     CDS             1..540
                     /gene="Ddx28"
                     /coded_by="NM_001108898.1:11..1633"
                     /db_xref="GeneID:364995"
                     /db_xref="RGD:1311976"
ORIGIN      
        1 malagptrll slavrlllep rrnivlrgsd qslpvvripr alqrrqeqrr sdrgsfqrpv
       61 lvqpgpllvs akrpelnqpa rltlgrwera plasrgwkhr rsrqdhfsie rvqqeapamr
      121 nlssrgnfvd lgleprvlla lqkavpeivq ptsvqsktip pllrgrhilc aaetgsgktl
      181 syllplfqrl lkgpeldsrs staprglvlv psrelaeqvq avaqslgryl dlqvielggg
      241 lgmnrlklql gkwpsadvlv atpgalwkal ksqlislhhl nfivldevdt lldesfvelv
      301 dyilgkspia espaeledpf npkaqlvmvg atfpeglnql lskvtspdsl ttitssklhc
      361 imphvrqtfm rlkgtekvte liqilkqhdk ankaepsgtv lvfcnsastv nwlgyilddh
      421 kiqhlrlqgq mpasmragif qsfqkgsqni lvctdiasrg ldsihvemvv nydfpptlqd
      481 yihragrvgr vgsevpgtvt sfvthpwdvs lvqkielaar rrrslpglts svrdplpqqd
//
