LOCUS       NM_199119               2820 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus DEAD-box helicase 24 (Ddx24), mRNA.
ACCESSION   NM_199119 XM_216770
VERSION     NM_199119.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2820)
  AUTHORS   Martin R, Straub AU, Doebele C and Bohnsack MT.
  TITLE     DExD/H-box RNA helicases in ribosome biogenesis
  JOURNAL   RNA Biol 10 (1), 4-18 (2013)
   PUBMED   22922795
  REMARK    Review article
REFERENCE   2  (bases 1 to 2820)
  AUTHORS   Baltz AG, Munschauer M, Schwanhausser B, Vasile A, Murakawa Y,
            Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E,
            Bonneau R, Selbach M, Dieterich C and Landthaler M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   3  (bases 1 to 2820)
  AUTHORS   Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein
            C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J and
            Hentze MW.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   4  (bases 1 to 2820)
  AUTHORS   Ghosh D, Lippert D, Krokhin O, Cortens JP and Wilkins JA.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AY341876.1.
            
            On Jan 12, 2005 this sequence version replaced XM_216770.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY341876.1, BC097262.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2820
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q32"
     gene            1..2820
                     /gene="Ddx24"
                     /note="DEAD-box helicase 24"
                     /db_xref="GeneID:373065"
                     /db_xref="RGD:727929"
     exon            1..46
                     /gene="Ddx24"
                     /inference="alignment:Splign:2.1.0"
     exon            47..769
                     /gene="Ddx24"
                     /inference="alignment:Splign:2.1.0"
     CDS             52..2607
                     /gene="Ddx24"
                     /EC_number="3.6.1.-"
                     /note="DEAD (Asp-Glu-Ala-Asp) box polypeptide 24; DEAD
                     (Asp-Glu-Ala-Asp) box helicase 24; ATP-dependent RNA
                     helicase DDX24-like"
                     /codon_start=1
                     /product="ATP-dependent RNA helicase DDX24"
                     /protein_id="NP_954550.1"
                     /db_xref="GeneID:373065"
                     /db_xref="RGD:727929"
                     /translation="MKLKETKSKPKSASRGTFQRKGIKVVGKWKQVTIDPNLFADGQM
                     DDLVCFEELTDYRLVKNPSRLFSDETTKKRKAQAVSEEEEEEEGESSSPKKKIKLKKQ
                     RDAILVAEGSAAQDECEGKASEPGAQGEITVCSDQKVGGATSESLAQTVPRKKKNKGK
                     KKLDTFQSTAPKVPKKAKTWMPEVQDQKADVSAWRDLFVPKAVLRALSFLGFSAPTPI
                     QALTLAPAIRDKLDILGAAETGSGKTLAFAIPMIHSVLQWHKMKAPPIPSSAGVPPRL
                     GAAAHRGSPCKDGAKSGVLPEEATIETEAQPSDSGVQATAKAGASAASAQAGLFCDDD
                     AGEGPSSLVEEKQSKDREEKLDEEQAGKLKQELCDQIAVYKVHPRRPLLGLVLTPTRE
                     LAVQVRQHIDAVAKFTGINTAILVGGMSTQKQQRMLNRHPEIVIATPGRLWELIKEKH
                     PHLSNLRQLRCLVIDEADRMVEKDHFAELSQLLEMLNDSQYNPNRQTLVFSATLTLVH
                     QAPARILHKKHVKKMDKTAKLDLLMQKIGMRGKPKVIDLTRNEGTVETLTETKIHCET
                     DEKDLYLYYFLMQYPGRSLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNL
                     EQFARLEDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIYIHRSGRTARATSEGLSL
                     MLIGPEDVINFKKIYKTLKKDEDIPLFPVQSKYMDMVKERIRLARQIEKAEYRNFQAC
                     LHNSWIEQAAAALEIELEEEMYKGGKADQQEERRRQKQMKILKQELRHLLSQPLFQEN
                     LKTRYPTQSGRPPQPVVAPRNVESALSCLSRQKRRRKKPKEHQAPPQPSSSTS"
     exon            770..1276
                     /gene="Ddx24"
                     /inference="alignment:Splign:2.1.0"
     exon            1277..1430
                     /gene="Ddx24"
                     /inference="alignment:Splign:2.1.0"
     exon            1431..1946
                     /gene="Ddx24"
                     /inference="alignment:Splign:2.1.0"
     exon            1947..2022
                     /gene="Ddx24"
                     /inference="alignment:Splign:2.1.0"
     exon            2023..2211
                     /gene="Ddx24"
                     /inference="alignment:Splign:2.1.0"
     exon            2212..2341
                     /gene="Ddx24"
                     /inference="alignment:Splign:2.1.0"
     exon            2342..2820
                     /gene="Ddx24"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggtcgggtt ggcgcaggcg gtctggcgtg tgaggatact gccgcgcaac catgaagttg
       61 aaggagacaa aatcgaagcc caagtcagca agccgtggca catttcagag gaagggcatc
      121 aaggttgtgg ggaaatggaa gcaagtgacg atcgacccaa atctgtttgc agatggacag
      181 atggatgact tggtgtgctt tgaggaactg acagattacc gcttagtcaa gaatccctcc
      241 cgtttgttct cagatgagac gaccaagaag agaaaggccc aggctgtgtc tgaagaggaa
      301 gaagaggagg agggagagtc cagctcccca aagaaaaaga tcaaattgaa gaagcagaga
      361 gatgcaatcc tcgttgctga aggcagcgct gcccaggatg aatgtgaagg gaaagcttct
      421 gagccagggg ctcagggaga aatcactgtg tgttctgatc agaaggtagg aggagccaca
      481 tcggaaagcc tggcacagac tgttccaaga aagaagaaaa acaaagggaa aaaaaaatta
      541 gacacttttc agagcactgc ccccaaagtg cccaaaaaag ctaagacgtg gatgcctgag
      601 gtgcaagacc agaaggcaga cgtgtcggcc tggagggacc tgtttgtacc caaggctgtt
      661 ctccgagctc tcagctttct aggtttctct gcacccaccc caatccaagc gctgactttg
      721 gcccctgcca tccgtgacaa actggacatc cttggagctg ctgagacagg aagcgggaaa
      781 acgctggctt ttgccatccc gatgattcac tcagtgttgc agtggcataa gatgaaggct
      841 ccacccatcc caagtagcgc tggagtgcca ccgaggttag gagctgcagc ccatcgtggc
      901 tcaccttgca aggatggagc gaagtctgga gtattgcctg aagaggccac aattgagact
      961 gaagcacagc ccagtgactc tggggtccag gccacagcca aggctggcgc ttctgctgcc
     1021 tcagcccagg cagggctctt ctgtgatgat gatgctggtg aagggccttc ttccttagtc
     1081 gaggaaaagc aaagtaagga cagagaagaa aagttggatg aagagcaggc tggaaagtta
     1141 aagcaggagt tgtgtgacca aattgctgtt tataaagtac acccaaggcg ccctctgctt
     1201 ggactggtcc tgactcctac ccgagagctg gctgtccagg tcagacaaca cattgatgct
     1261 gtggccaagt ttacagggat caatacagca attttagtcg gtggaatgtc cacacagaaa
     1321 cagcaaagga tgctgaaccg ccatcctgag attgtgatcg ccacccctgg tcggctctgg
     1381 gagttaatca aagaaaaaca ccctcatttg agtaaccttc ggcagctcag gtgcctggtc
     1441 atagatgagg ctgatcggat ggttgagaaa gaccattttg ctgaactctc tcagctgcta
     1501 gagatgctaa atgactccca gtacaacccc aatcgccaaa ctcttgtttt ttctgccaca
     1561 ctaaccttgg tacaccaagc tcctgcacga atccttcata agaaacacgt gaagaaaatg
     1621 gataaaactg ccaaacttga ccttctcatg cagaagattg gcatgcgggg caaaccgaaa
     1681 gtcattgacc tcacaaggaa tgagggcaca gtggagacgc tgacggagac caagatccac
     1741 tgcgagacag atgagaaaga cttgtatctc tactattttc tcatgcagta cccaggtcgt
     1801 agcctggtat ttgccaacag catctcttgc atcaaacgcc tctctgggct cctcaaggtc
     1861 ttggatatca tgccactgac cctgcatgcc tgcatgcacc agaagcaaag gctcagaaac
     1921 ctggagcagt ttgctcggct ggaagactgt gttctcttgg caacagacgt ggcagctcgg
     1981 ggtctggata ttcctaaagt tcagcatgtc atccattacc aggtgcctcg cacctcggag
     2041 atttatatcc accgaagcgg tcggacggct cgtgctacca gtgaaggcct cagcttgatg
     2101 ctgattgggc ctgaggatgt gatcaacttc aagaagattt acaaaactct caagaaagat
     2161 gaggacatcc cactgttccc agtgcagtca aagtacatgg acatggtcaa ggagcggatc
     2221 cgtctagccc ggcagattga aaaagctgaa taccggaact tccaggcttg tttgcacaac
     2281 tcatggatcg agcaagcagc ggcggccctg gagattgaac tagaagaaga gatgtacaaa
     2341 ggaggaaaag ctgaccagca agaggagcgc cggcggcaga agcagatgaa gattctgaag
     2401 caggagctac gccatctgct ctcccagcca ctctttcagg agaacctgaa gaccaggtac
     2461 cccacacagt ctggcaggcc gcctcagcct gtggtggccc ccaggaatgt cgagtctgca
     2521 ctgagctgcc tctccaggca aaagaggagg agaaagaagc caaaagaaca ccaggcacca
     2581 ccacagccaa gttctagcac aagctaacta cctggtcagt gtagtgactg ttgagtgaca
     2641 tccttccgtt gtctgtgaag gcctcccctc cctacccttc acaccaccat ccacctgggc
     2701 agacctcctg cacactgttg tggagtgagt gtggtaggca gcgccgtgtc tgtatcagtg
     2761 tgcgcaggct tcttgcggtc cccttatttc ccacattaaa caaaggagga gtcagagtca
//
