LOCUS       NM_001389274             840 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus DNA-damage-inducible transcript 4-like (Ddit4l),
            mRNA.
ACCESSION   NM_001389274 XM_002729121 XM_003753664
VERSION     NM_001389274.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 840)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On or before Dec 8, 2020 this sequence version replaced
            XM_002729121.5, XM_003753664.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.10247.1,
                                           SRR22582419.1316528.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-146               JAXUCZ010000002.1  228801707-228801852
            147-288             JAXUCZ010000002.1  228802108-228802249
            289-840             JAXUCZ010000002.1  228803927-228804478
FEATURES             Location/Qualifiers
     source          1..840
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q43"
     gene            1..840
                     /gene="Ddit4l"
                     /note="DNA-damage-inducible transcript 4-like"
                     /db_xref="GeneID:100363484"
                     /db_xref="RGD:2322961"
     exon            1..146
                     /gene="Ddit4l"
                     /inference="alignment:Splign:2.1.0"
     exon            147..288
                     /gene="Ddit4l"
                     /inference="alignment:Splign:2.1.0"
     CDS             198..779
                     /gene="Ddit4l"
                     /note="DNA-damage-inducible transcript 4-like
                     protein-like; soleus muscle atrophied after hindlimb
                     suspension protein 1"
                     /codon_start=1
                     /product="DNA damage-inducible transcript 4-like protein"
                     /protein_id="NP_001376203.1"
                     /db_xref="GeneID:100363484"
                     /db_xref="RGD:2322961"
                     /translation="MVATGSLSSKNTASISELLDGGSHPGSLLSDFDYWDYVVPEPNL
                     NEVVFEETTCQNLVKMLENCLSKSKQTKLGCSKVLVPEKLTQRIAQDVLRLSSTEPCG
                     LRGCVMHVNLEIENVCKKLDRIVCDASVVPTFELTLVFKQESCSWTSLKDFFFSGGRF
                     SSGLRRTLILSSGFRLVKKKLYSLIGTTVIEEC"
     exon            289..840
                     /gene="Ddit4l"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggccgggtgc agcctgtgct ggtgggcgcg gtggcccgaa gccttggact cactgcagga
       61 ctgtgcaggg aaccactgtc caagcatcgg gctaataggg ggcgcctgcc tcggtttacc
      121 cttcagcgtc tggtgaaatc ccgcagcgtc tagggaaaga tccgttctgc tccgcgaggg
      181 aaacagagcc gttgaccatg gttgcaacgg gcagtttgag cagtaagaac acggccagca
      241 tttcagagtt gctggacggt ggctctcacc ctgggagtct gctaagtgat ttcgactact
      301 gggattatgt cgtccccgag cccaacctca acgaggtggt gtttgaagag acaacatgcc
      361 agaatttggt taaaatgttg gagaactgtc tgtccaagtc aaagcaaacc aaactcggtt
      421 gctctaaggt cctggttcct gagaaactga cccagagaat tgcccaagat gtcctgcggc
      481 tctcatccac agagccctgc ggccttcggg gctgtgttat gcacgtgaac ttggaaattg
      541 aaaatgtgtg taaaaagctg gataggattg tgtgtgatgc tagtgtggtg ccgacctttg
      601 agctcacgct ggtgttcaag caggagagct gctcctggac cagcctcaag gacttcttct
      661 ttagcggagg tcgcttctcg tcgggcctta ggcgaactct gatcctcagc tcgggatttc
      721 gacttgttaa gaaaaaactg tactctctga ttggaacgac agtcattgag gagtgctgag
      781 gaggaaaaaa caattaaagg tccctaatga gtggctaata aacctctgga gctatccagc
//
