LOCUS       NM_001033066            3409 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus DDHD domain containing 1 (Ddhd1), mRNA.
ACCESSION   NM_001033066 XM_223930
VERSION     NM_001033066.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3409)
  AUTHORS   Baba,T., Kashiwagi,Y., Arimitsu,N., Kogure,T., Edo,A., Maruyama,T.,
            Nakao,K., Nakanishi,H., Kinoshita,M., Frohman,M.A., Yamamoto,A. and
            Tani,K.
  TITLE     Phosphatidic acid (PA)-preferring phospholipase A1 regulates
            mitochondrial dynamics
  JOURNAL   J Biol Chem 289 (16), 11497-11511 (2014)
   PUBMED   24599962
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000015.1.
            
            [WARNING] On Jul 16, 2024 this sequence was replaced by
            NM_001033066.3.
            
            On Nov 27, 2020 this sequence version replaced NM_001033066.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC103649.1, SRR26360181.520097.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-856               JAXUCZ010000015.1  21369753-21370608   c
            857-1030            JAXUCZ010000015.1  21340732-21340905   c
            1031-1159           JAXUCZ010000015.1  21332142-21332270   c
            1160-1307           JAXUCZ010000015.1  21330572-21330719   c
            1308-1414           JAXUCZ010000015.1  21327819-21327925   c
            1415-1521           JAXUCZ010000015.1  21324213-21324319   c
            1522-1784           JAXUCZ010000015.1  21319642-21319904   c
            1785-1860           JAXUCZ010000015.1  21318199-21318274   c
            1861-2010           JAXUCZ010000015.1  21314123-21314272   c
            2011-2263           JAXUCZ010000015.1  21311938-21312190   c
            2264-2455           JAXUCZ010000015.1  21310926-21311117   c
            2456-3409           JAXUCZ010000015.1  21304055-21305008   c
FEATURES             Location/Qualifiers
     source          1..3409
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p14"
     gene            1..3409
                     /gene="Ddhd1"
                     /note="DDHD domain containing 1"
                     /db_xref="GeneID:305816"
                     /db_xref="RGD:1308576"
     exon            1..856
                     /gene="Ddhd1"
                     /inference="alignment:Splign:2.1.0"
     CDS             70..2637
                     /gene="Ddhd1"
                     /codon_start=1
                     /product="phospholipase DDHD1"
                     /protein_id="NP_001028238.1"
                     /db_xref="GeneID:305816"
                     /db_xref="RGD:1308576"
                     /translation="MNYPGRGAPRSPERNGRGGGAWELGSDAAGVFGGGGCCFEHQPG
                     DGVPLSLLRAEPLHLAPGADDLSHLALDPCLSDENYDFSSAESGSSLRYYSEGESAGG
                     GSSSSPPPPLVAPNSGGGGAAGGGPGDRKRSRPGGCAARHRYEVVTELGPEEVRWFYK
                     EDKKTWKPFIGYDSLRIELAFRSLLQTTGSRARSADRDGDRVCGPTSSFREDDEDRAC
                     GFCPRAVGPEPEMEELVTIEPVCVRGGLYEVDVTQGECYPVYWNQADKIPVMRGQWFI
                     DGTWQPLEEEESNLIEQEHLSCFRGQQMQENFDIEMSKSIDGKDAVHSFKLSRNHVDW
                     HSMDEVYLYSDATTSKIARTVTQKLGFSKASSSGTRLHRGYVEEATLEDKPSQTSHIV
                     FVVHGIGQKMDQGRIIKNTAMMREAARKIEEKHFANHATHVEFLPVEWRSKLTLDGDT
                     VDSITPDKVRGLRDMLNSSAMDIMYYTSPLYRDELVKGLQQELNRLYSLFCSRNPDFE
                     EKGGKVSIVSHSLGCVITYDIMMGWNPVRLYEQLLQKEEELPDERWMSYEERHLLDEL
                     YITKRRLREIEDRLHGLKAPSGSQTPALKFKVENFFCMGSPLAVFLALRGIRPGNTGS
                     QDHILPREICNRLLNIFHPTDPVAYRLEPLILKHYSNISPVQIHWYNTSNPLPYEHMK
                     PNFLNPAKEPTSASESENIAAIPSPVTSPVLSRRHYGESITNIGKASILGAASIGKGL
                     GGMLFSRFGRSSTPQPSEPSKDSAEEEKKPVSSPSTTTVATQTLPHSSSGFLDSALEL
                     EHRIDFELREGLVESRYWSAVTSHTAYWSSLDVALFLLTFMYKHEHDSEAKTSLDSI"
     exon            857..1030
                     /gene="Ddhd1"
                     /inference="alignment:Splign:2.1.0"
     exon            1031..1159
                     /gene="Ddhd1"
                     /inference="alignment:Splign:2.1.0"
     exon            1160..1307
                     /gene="Ddhd1"
                     /inference="alignment:Splign:2.1.0"
     exon            1308..1414
                     /gene="Ddhd1"
                     /inference="alignment:Splign:2.1.0"
     exon            1415..1521
                     /gene="Ddhd1"
                     /inference="alignment:Splign:2.1.0"
     exon            1522..1784
                     /gene="Ddhd1"
                     /inference="alignment:Splign:2.1.0"
     exon            1785..1860
                     /gene="Ddhd1"
                     /inference="alignment:Splign:2.1.0"
     exon            1861..2010
                     /gene="Ddhd1"
                     /inference="alignment:Splign:2.1.0"
     exon            2011..2263
                     /gene="Ddhd1"
                     /inference="alignment:Splign:2.1.0"
     exon            2264..2455
                     /gene="Ddhd1"
                     /inference="alignment:Splign:2.1.0"
     exon            2456..3409
                     /gene="Ddhd1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaaagattat aaagtccggg cccagagggc ggcggcatcg gatgcgcgtg tggcggaagc
       61 gccggcggca tgaactaccc cggccgcggc gccccacgga gccccgagcg taacggccgc
      121 ggcggcggtg cctgggagct aggctcggac gcggcgggcg tgttcggtgg cggcggctgc
      181 tgcttcgagc accagccggg tgacggcgtg ccgctgtcac tgctgcgcgc ggagccgctg
      241 cacctggcac cgggcgcgga cgacttgagc cacctggctc tggacccgtg cctcagcgac
      301 gagaactacg acttcagctc ggccgagtcg ggttcgtcgc tgcgctacta cagcgagggc
      361 gagagcgcgg gcggcggtag ctcttcttcg cctccgccgc cgctggtcgc tccgaactcg
      421 gggggcggcg gggcagcggg agggggaccc ggtgacagga agcgctcccg gccgggcggc
      481 tgcgccgctc ggcaccgcta cgaggtagtg acggagctgg gccccgagga ggtgcgctgg
      541 ttctacaagg aagacaagaa gacctggaag cccttcatcg gctacgactc tctgcgcatt
      601 gagctcgcct tccggagcct cctgcagacg acgggctctc gtgcccggtc ggcggaccgc
      661 gatggagacc gggtgtgcgg cccaacctct agcttcaggg aggacgacga ggaccgcgcc
      721 tgcggcttct gcccgcgcgc ggtggggcct gagccggaga tggaggagct ggtgaccatc
      781 gagcccgtgt gcgtgcgcgg cggcctctac gaggtggatg tcactcaagg agagtgctac
      841 ccggtatact ggaaccaggc cgataaaata ccagtgatgc gtggacagtg gtttatcgat
      901 ggcacttggc aacctctgga ggaagaagag agtaacttaa ttgagcaaga acatctcagt
      961 tgttttaggg gtcagcagat gcaagagaat tttgatattg aaatgtccaa atccatcgat
     1021 ggaaaagacg ctgttcatag tttcaaactg agtcggaacc acgtggactg gcacagcatg
     1081 gacgaggtct atctctacag tgacgcaaca acttccaaaa ttgcaagaac tgttacccag
     1141 aaactggggt tttctaaagc ctccagcagt gggaccagac ttcacagagg ctacgtagaa
     1201 gaagccacac tagaagacaa gccatcgcaa acttctcata ttgtgtttgt tgtgcacggc
     1261 attggacaga agatggacca aggaagaatc atcaaaaaca cagccatgat gagagaggct
     1321 gcaaggaaaa tagaagaaaa gcattttgcc aaccacgcaa cacacgttga gtttctacct
     1381 gtggagtggc gatcgaagct tactcttgat ggagacactg ttgactccat cactcctgac
     1441 aaggtgcggg gcctgaggga catgctcaac agcagcgcca tggacatcat gtactacacc
     1501 agcccgctct acagggatga gctagttaaa ggccttcagc aagagctgaa tcgattatat
     1561 tcccttttct gttcccggaa tccagacttt gaagagaaag ggggtaaagt ctcaatagtg
     1621 tcccattcct tggggtgtgt aatcacttat gacatcatga tgggctggaa tccagttcga
     1681 ctttatgagc agctgctgca gaaggaggag gagctgcctg acgagcggtg gatgagctac
     1741 gaagagcggc atcttcttga tgagctctat atcactaaac ggcggctgag ggaaattgaa
     1801 gatcggctgc atggattgaa ggcgccatcc ggctcacaaa cacctgcctt aaagtttaag
     1861 gttgagaatt tcttctgtat gggatctccg ctagcagttt ttttagcatt acgcggcatc
     1921 cgaccaggaa ataccggaag tcaagaccac attttaccta gagagatctg taaccgctta
     1981 ctaaatattt ttcatcctac agacccagtg gcctacagat tagagccatt gattctgaaa
     2041 cactacagca acatttctcc agtccagatc cactggtaca acacttcgaa ccctctacct
     2101 tatgagcata tgaagccaaa ctttctcaac ccagcaaaag agcctacctc agcttcagag
     2161 agtgagaaca tcgcagctat cccgagccct gtaacctccc cagtcttatc tcggcgccac
     2221 tatggggaat ccataactaa cattggcaaa gcgagcatac tgggggctgc tagcattgga
     2281 aaggggcttg gaggaatgtt gttctcaagg ttcggacggt cctccacacc acagccgtcg
     2341 gagccatcta aggactcagc ggaagaggag aagaagcctg tctcttcacc ctccaccacc
     2401 accgtggcca cgcagaccct gccgcacagc agctccggct tcctcgactc tgcattggaa
     2461 ctggagcaca ggatcgactt cgaactcaga gaaggccttg tggagagccg ctattggtca
     2521 gccgtcacgt cgcacactgc ctattggtca tccttggatg tcgctctttt tcttttaaca
     2581 ttcatgtaca agcacgagca tgacagcgag gcaaagacca gcctagattc aatctgaact
     2641 ctggacggat atgaatggcc caaaactttt ctgttaaaaa atgtgtcaag acatggagat
     2701 tccaaggttc cggttttgtt aagggcaaga aatattttaa tttaaaagca ctttatttta
     2761 tttttaaaag agaaaaaaac cacattttca gttctaaagg agttatttat gtttctgtca
     2821 ttttgattga gtctagcaga gcccctgcag agaatcacca gagtggagtg tggtgggctt
     2881 aggtgaactg catgaaggca gccatcacaa cccagttctc cagaggagcc taacgtaacg
     2941 tattaaccaa aaggcgttac agcgctgacg tgcctgaagg ccagtccact ctgcaaagac
     3001 tacaaggggg catcgtggct tctcgattct gcaaaggctt ctgtgcccac agttcctttg
     3061 aaagaagagt atagcagatt ttaaatgtcc taaatttaac ttgttttgaa aagctaatgc
     3121 taaaaagcaa tatttgaact actgtactta taatttatca tccctactta cttcagtgca
     3181 ggaaacatgc ttaatgtctc ttttgccaca tctactctgt atcatgttga ggctcctttt
     3241 tctcaaaact ccatctttgt aaatgagtag ctgatcctgt ggcgtaattt cagggggtct
     3301 ggggggttgg gttttgtttt tttgtttttg tttttttggt tttttggggt tttttttttt
     3361 gttttggttt tttttttgtt ttatttttca ttaaaaacat ggtttcaca
//
